RNA–Protein interactions for RNA: ENST00000479930.5

TTC3-216, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 8,998 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-216ENST00000479930 RMDN3Q96TC7 470 aa9.61□□□□□ -0.87
TTC3-216ENST00000479930 MUC3BQ9H195 1237 aa9.61□□□□□ -0.87
TTC3-216ENST00000479930 NCOA5Q9HCD5 579 aaKnown RBP9.61□□□□□ -0.87
TTC3-216ENST00000479930 CALCRLQ16602 461 aa9.61□□□□□ -0.87
TTC3-216ENST00000479930 TAS1R3Q7RTX0 852 aa9.61□□□□□ -0.87
TTC3-216ENST00000479930 P3H4Q92791 437 aa9.61□□□□□ -0.87
TTC3-216ENST00000479930 ELAC2Q9BQ52 826 aaKnown RBP9.61□□□□□ -0.87
TTC3-216ENST00000479930 SEL1LQ9UBV2 794 aa9.61□□□□□ -0.87
TTC3-216ENST00000479930 DDX41Q9UJV9 622 aaKnown RBP9.61□□□□□ -0.87
TTC3-216ENST00000479930 PSMD14O00487 310 aa9.6□□□□□ -0.87
TTC3-216ENST00000479930 ADCY8P40145 1251 aa9.6□□□□□ -0.87
TTC3-216ENST00000479930 ARF5P84085 180 aa9.6□□□□□ -0.87
TTC3-216ENST00000479930 CIAPIN1Q6FI81 312 aa9.6□□□□□ -0.87
TTC3-216ENST00000479930 CAPRIN2Q6IMN6 1127 aaKnown RBP9.6□□□□□ -0.87
TTC3-216ENST00000479930 TSGA10Q9BZW7 698 aa9.6□□□□□ -0.87
TTC3-216ENST00000479930 PAXBP1Q9Y5B6 917 aa9.6□□□□□ -0.87
TTC3-216ENST00000479930 ACSL4O60488 711 aa9.6□□□□□ -0.87
TTC3-216ENST00000479930 TROVE2P10155 538 aaKnown RBP eCLIP9.6□□□□□ -0.87
TTC3-216ENST00000479930 R3HDM1Q15032 1099 aaKnown RBP9.6□□□□□ -0.87
TTC3-216ENST00000479930 KRT31Q15323 416 aa9.6□□□□□ -0.87
TTC3-216ENST00000479930 SV2CQ496J9 727 aa9.6□□□□□ -0.87
TTC3-216ENST00000479930 ZNF227Q86WZ6 799 aa9.6□□□□□ -0.87
TTC3-216ENST00000479930 ADI1Q9BV57 179 aa9.6□□□□□ -0.87
TTC3-216ENST00000479930 CTSHP09668 335 aa9.6□□□□□ -0.87
TTC3-216ENST00000479930 COPB1P53618 953 aaKnown RBP9.6□□□□□ -0.87
TTC3-216ENST00000479930 DYNLT1P63172 113 aa9.6□□□□□ -0.87
TTC3-216ENST00000479930 CDO1Q16878 200 aa9.6□□□□□ -0.87
TTC3-216ENST00000479930 TRIM71Q2Q1W2 868 aaKnown RBP9.6□□□□□ -0.87
TTC3-216ENST00000479930 ZNF507Q8TCN5 953 aa9.6□□□□□ -0.87
TTC3-216ENST00000479930 SH3TC2Q8TF17 1288 aa9.6□□□□□ -0.87
TTC3-216ENST00000479930 PIM2Q9P1W9 311 aa9.6□□□□□ -0.87
TTC3-216ENST00000479930 POTEFA5A3E0 1075 aa9.6□□□□□ -0.87
TTC3-216ENST00000479930 CYP4A11Q02928 519 aa9.6□□□□□ -0.87
TTC3-216ENST00000479930 BHMTQ93088 406 aa9.6□□□□□ -0.87
TTC3-216ENST00000479930 MMP19Q99542 508 aa9.6□□□□□ -0.87
TTC3-216ENST00000479930 BBS2Q9BXC9 721 aa9.6□□□□□ -0.87
TTC3-216ENST00000479930 PLEKHA4Q9H4M7 779 aa9.6□□□□□ -0.87
TTC3-216ENST00000479930 PPEF1O14829 653 aaPredicted RBP9.6□□□□□ -0.87
TTC3-216ENST00000479930 COBLO75128 1261 aa9.6□□□□□ -0.87
TTC3-216ENST00000479930 CPP00450 1065 aa9.6□□□□□ -0.87
TTC3-216ENST00000479930 AMPD2Q01433 879 aa9.6□□□□□ -0.87
TTC3-216ENST00000479930 ACTN3Q08043 901 aaPredicted RBP9.6□□□□□ -0.87
TTC3-216ENST00000479930 SREBF2Q12772 1141 aa9.6□□□□□ -0.87
TTC3-216ENST00000479930 TMEM132BQ14DG7 1078 aa9.6□□□□□ -0.87
TTC3-216ENST00000479930 MTBPQ96DY7 904 aa9.6□□□□□ -0.87
TTC3-216ENST00000479930 COPS7BQ9H9Q2 264 aaPredicted RBP9.6□□□□□ -0.87
TTC3-216ENST00000479930 GOLGA8QA0A0J9YX86 632 aa9.6□□□□□ -0.87
TTC3-216ENST00000479930 GOLGA8OA6NCC3 632 aa9.6□□□□□ -0.87
TTC3-216ENST00000479930 GOLGA8NF8WBI6 632 aa9.6□□□□□ -0.87
TTC3-216ENST00000479930 LZTS3O60299 673 aaPredicted RBP9.6□□□□□ -0.87
TTC3-216ENST00000479930 PCDH8O95206 1070 aa9.6□□□□□ -0.87
TTC3-216ENST00000479930 MYOCDQ8IZQ8 938 aa9.6□□□□□ -0.87
TTC3-216ENST00000479930 OR9Q1Q8NGQ5 310 aa9.6□□□□□ -0.87
TTC3-216ENST00000479930 VPS50Q96JG6 964 aa9.6□□□□□ -0.87
TTC3-216ENST00000479930 SYBUQ9NX95 663 aa9.6□□□□□ -0.87
TTC3-216ENST00000479930 MAPK8IP1Q9UQF2 711 aa9.6□□□□□ -0.87
TTC3-216ENST00000479930 AP3D1O14617 1153 aa9.6□□□□□ -0.87
TTC3-216ENST00000479930 ITGAXP20702 1163 aa9.6□□□□□ -0.87
TTC3-216ENST00000479930 JADE3Q92613 823 aa9.6□□□□□ -0.87
TTC3-216ENST00000479930 RBMXL2O75526 392 aaKnown RBP9.59□□□□□ -0.87
TTC3-216ENST00000479930 ARF4P18085 180 aaPredicted RBP9.59□□□□□ -0.87
TTC3-216ENST00000479930 WEE1P30291 646 aa9.59□□□□□ -0.87
TTC3-216ENST00000479930 HOXC12P31275 282 aa9.59□□□□□ -0.87
TTC3-216ENST00000479930 TBC1D8BQ0IIM8 1120 aa9.59□□□□□ -0.87
TTC3-216ENST00000479930 FAAH2Q6GMR7 532 aa9.59□□□□□ -0.87
TTC3-216ENST00000479930 COPS6Q7L5N1 327 aa9.59□□□□□ -0.87
TTC3-216ENST00000479930 R3HCC1LQ7Z5L2 792 aaKnown RBP9.59□□□□□ -0.87
TTC3-216ENST00000479930 MANSC1Q9H8J5 431 aa9.59□□□□□ -0.87
TTC3-216ENST00000479930 GDAQ9Y2T3 454 aa9.59□□□□□ -0.87
TTC3-216ENST00000479930 H3BUI4 141 aa9.59□□□□□ -0.87
TTC3-216ENST00000479930 CTSEP14091 401 aa9.59□□□□□ -0.87
TTC3-216ENST00000479930 ADD1P35611 737 aaKnown RBP9.59□□□□□ -0.87
TTC3-216ENST00000479930 CCT5P48643 541 aa9.59□□□□□ -0.87
TTC3-216ENST00000479930 SOHLH2Q9NX45 425 aa9.59□□□□□ -0.87
TTC3-216ENST00000479930 TJP2Q9UDY2 1190 aa9.59□□□□□ -0.87
TTC3-216ENST00000479930 USP18Q9UMW8 372 aa9.59□□□□□ -0.87
TTC3-216ENST00000479930 KRT38O76015 456 aa9.59□□□□□ -0.87
TTC3-216ENST00000479930 KLHL18O94889 574 aa9.59□□□□□ -0.87
TTC3-216ENST00000479930 PAPOLAP51003 745 aaKnown RBP9.59□□□□□ -0.87
TTC3-216ENST00000479930 PLA2G4DQ86XP0 818 aa9.59□□□□□ -0.87
TTC3-216ENST00000479930 ASAP3Q8TDY4 903 aa9.59□□□□□ -0.87
TTC3-216ENST00000479930 UCMAQ8WVF2 138 aa9.59□□□□□ -0.87
TTC3-216ENST00000479930 OTUD5Q96G74 571 aa9.59□□□□□ -0.87
TTC3-216ENST00000479930 CCDC177Q9NQR7 707 aaPredicted RBP9.59□□□□□ -0.87
TTC3-216ENST00000479930 POLE3Q9NRF9 147 aa9.59□□□□□ -0.87
TTC3-216ENST00000479930 NCKAP1Q9Y2A7 1128 aa9.59□□□□□ -0.87
TTC3-216ENST00000479930 F5H423 210 aaPredicted RBP9.59□□□□□ -0.87
TTC3-216ENST00000479930 ARMT1Q9H993 441 aa9.59□□□□□ -0.87
TTC3-216ENST00000479930 DBNDD1Q9H9R9 158 aa9.59□□□□□ -0.87
TTC3-216ENST00000479930 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.59□□□□□ -0.87
TTC3-216ENST00000479930 ITIH6Q6UXX5 1313 aa9.59□□□□□ -0.87
TTC3-216ENST00000479930 MBD4O95243 580 aa9.59□□□□□ -0.87
TTC3-216ENST00000479930 KPNA2P52292 529 aaKnown RBP9.59□□□□□ -0.87
TTC3-216ENST00000479930 MCEMP1Q8IX19 187 aa9.59□□□□□ -0.87
TTC3-216ENST00000479930 DHX38Q92620 1227 aaKnown RBP9.59□□□□□ -0.87
TTC3-216ENST00000479930 NUP58Q9BVL2 599 aa9.59□□□□□ -0.87
TTC3-216ENST00000479930 MCCC2Q9HCC0 563 aa9.59□□□□□ -0.87
TTC3-216ENST00000479930 NLRC4Q9NPP4 1024 aa9.59□□□□□ -0.87
TTC3-216ENST00000479930 SLC39A10Q9ULF5 831 aa9.59□□□□□ -0.87
TTC3-216ENST00000479930 MLNP12872 115 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms