RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 TNS2Q63HR2 1409 aa15.55■□□□□ 0.08
COL20A1-206ENST00000479501 MYO1CO00159 1063 aa15.54■□□□□ 0.08
COL20A1-206ENST00000479501 RGS16O15492 202 aaPredicted RBP15.54■□□□□ 0.08
COL20A1-206ENST00000479501 RNF207Q6ZRF8 634 aa15.54■□□□□ 0.08
COL20A1-206ENST00000479501 DCPSQ96C86 337 aaKnown RBP15.54■□□□□ 0.08
COL20A1-206ENST00000479501 PBKQ96KB5 322 aa15.54■□□□□ 0.08
COL20A1-206ENST00000479501 ST7Q9NRC1 585 aa15.54■□□□□ 0.08
COL20A1-206ENST00000479501 NYAP2Q9P242 653 aa15.54■□□□□ 0.08
COL20A1-206ENST00000479501 STK38LQ9Y2H1 464 aa15.54■□□□□ 0.08
COL20A1-206ENST00000479501 SALL1Q9NSC2 1324 aa15.54■□□□□ 0.08
COL20A1-206ENST00000479501 CIB2O75838 187 aa15.54■□□□□ 0.08
COL20A1-206ENST00000479501 TMEM191BP0C7N4 346 aa15.54■□□□□ 0.08
COL20A1-206ENST00000479501 CCND2P30279 289 aa15.54■□□□□ 0.08
COL20A1-206ENST00000479501 CHRNA5P30532 468 aa15.54■□□□□ 0.08
COL20A1-206ENST00000479501 SLC8A1P32418 973 aa15.54■□□□□ 0.08
COL20A1-206ENST00000479501 PEX3P56589 373 aa15.54■□□□□ 0.08
COL20A1-206ENST00000479501 UAP1Q16222 522 aaPredicted RBP15.54■□□□□ 0.08
COL20A1-206ENST00000479501 FAM160B1Q5W0V3 765 aa15.54■□□□□ 0.08
COL20A1-206ENST00000479501 GIMAP8Q8ND71 665 aaPredicted RBP15.54■□□□□ 0.08
COL20A1-206ENST00000479501 ZNF653Q96CK0 615 aa15.54■□□□□ 0.08
COL20A1-206ENST00000479501 TYW1Q9NV66 732 aaKnown RBP15.54■□□□□ 0.08
COL20A1-206ENST00000479501 BAZ2BQ9UIF8 2168 aaKnown RBP15.54■□□□□ 0.08
COL20A1-206ENST00000479501 NDUFB10O96000 172 aa15.54■□□□□ 0.08
COL20A1-206ENST00000479501 IFNB1P01574 187 aa15.54■□□□□ 0.08
COL20A1-206ENST00000479501 SNX16P57768 344 aa15.54■□□□□ 0.08
COL20A1-206ENST00000479501 GRM1Q13255 1194 aa15.54■□□□□ 0.08
COL20A1-206ENST00000479501 RMDN3Q96TC7 470 aa15.54■□□□□ 0.08
COL20A1-206ENST00000479501 CLTAP09496 248 aa15.53■□□□□ 0.08
COL20A1-206ENST00000479501 PIK3CAP42336 1068 aa15.53■□□□□ 0.08
COL20A1-206ENST00000479501 ILDR1Q86SU0 546 aaPredicted RBP15.53■□□□□ 0.08
COL20A1-206ENST00000479501 ZNF277Q9NRM2 450 aaPredicted RBP15.53■□□□□ 0.08
COL20A1-206ENST00000479501 TXNDC16Q9P2K2 825 aa15.53■□□□□ 0.08
COL20A1-206ENST00000479501 MRFAP1Q9Y605 127 aa15.53■□□□□ 0.08
COL20A1-206ENST00000479501 PALM3A6NDB9 673 aaPredicted RBP15.53■□□□□ 0.08
COL20A1-206ENST00000479501 HIP1RO75146 1068 aa15.53■□□□□ 0.08
COL20A1-206ENST00000479501 TNNC2P02585 160 aa15.53■□□□□ 0.08
COL20A1-206ENST00000479501 MTMR1Q13613 665 aa15.53■□□□□ 0.08
COL20A1-206ENST00000479501 COL9A3Q14050 684 aaPredicted RBP15.53■□□□□ 0.08
COL20A1-206ENST00000479501 CC2D1AQ6P1N0 951 aaPredicted RBP15.53■□□□□ 0.08
COL20A1-206ENST00000479501 PADI6Q6TGC4 694 aa15.53■□□□□ 0.08
COL20A1-206ENST00000479501 SEPT14Q6ZU15 432 aa15.53■□□□□ 0.08
COL20A1-206ENST00000479501 CCDC110Q8TBZ0 833 aa15.53■□□□□ 0.08
COL20A1-206ENST00000479501 PIM2Q9P1W9 311 aa15.53■□□□□ 0.08
COL20A1-206ENST00000479501 ATF5Q9Y2D1 282 aaPredicted RBP15.53■□□□□ 0.08
COL20A1-206ENST00000479501 ITIH6Q6UXX5 1313 aa15.53■□□□□ 0.08
COL20A1-206ENST00000479501 ESYT2A0FGR8 921 aa15.53■□□□□ 0.08
COL20A1-206ENST00000479501 MYMKA6NI61 221 aa15.53■□□□□ 0.08
COL20A1-206ENST00000479501 P4HA1P13674 534 aa15.53■□□□□ 0.08
COL20A1-206ENST00000479501 GFPT1Q06210 699 aaPredicted RBP15.53■□□□□ 0.08
COL20A1-206ENST00000479501 MTERF2Q49AM1 385 aa15.53■□□□□ 0.08
COL20A1-206ENST00000479501 RNF10Q8N5U6 811 aaKnown RBP15.53■□□□□ 0.08
COL20A1-206ENST00000479501 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.53■□□□□ 0.08
COL20A1-206ENST00000479501 EPC1Q9H2F5 836 aa15.53■□□□□ 0.08
COL20A1-206ENST00000479501 PPP1R3GB7ZBB8 358 aa15.53■□□□□ 0.08
COL20A1-206ENST00000479501 CLGNO14967 610 aa15.53■□□□□ 0.08
COL20A1-206ENST00000479501 SLC7A5Q01650 507 aa15.53■□□□□ 0.08
COL20A1-206ENST00000479501 IFT88Q13099 833 aa15.53■□□□□ 0.08
COL20A1-206ENST00000479501 MIS18BP1Q6P0N0 1132 aa15.53■□□□□ 0.08
COL20A1-206ENST00000479501 PRPF38AQ8NAV1 312 aaKnown RBP15.53■□□□□ 0.08
COL20A1-206ENST00000479501 EDEM3Q9BZQ6 932 aa15.53■□□□□ 0.08
COL20A1-206ENST00000479501 JMJD4Q9H9V9 463 aa15.53■□□□□ 0.08
COL20A1-206ENST00000479501 DNAJC12Q9UKB3 198 aa15.53■□□□□ 0.08
COL20A1-206ENST00000479501 ADAM21Q9UKJ8 722 aa15.53■□□□□ 0.08
COL20A1-206ENST00000479501 DAAM1Q9Y4D1 1078 aa15.53■□□□□ 0.08
COL20A1-206ENST00000479501 GOLGA8IPA6NC78 632 aa15.52■□□□□ 0.08
COL20A1-206ENST00000479501 GOLGA8JA6NMD2 632 aa15.52■□□□□ 0.08
COL20A1-206ENST00000479501 IPO5O00410 1097 aaKnown RBP15.52■□□□□ 0.08
COL20A1-206ENST00000479501 SRGNP10124 158 aa15.52■□□□□ 0.08
COL20A1-206ENST00000479501 PEX19P40855 299 aa15.52■□□□□ 0.08
COL20A1-206ENST00000479501 EIF2AK1Q9BQI3 630 aaKnown RBP15.52■□□□□ 0.08
COL20A1-206ENST00000479501 RAVER2Q9HCJ3 691 aaKnown RBP15.52■□□□□ 0.08
COL20A1-206ENST00000479501 FAM217BQ9NTX9 383 aaPredicted RBP15.52■□□□□ 0.08
COL20A1-206ENST00000479501 ABCB11O95342 1321 aa15.52■□□□□ 0.08
COL20A1-206ENST00000479501 ADCY8P40145 1251 aa15.52■□□□□ 0.08
COL20A1-206ENST00000479501 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.52■□□□□ 0.08
COL20A1-206ENST00000479501 KCTD2Q14681 263 aa15.52■□□□□ 0.07
COL20A1-206ENST00000479501 PKN1Q16512 942 aa15.52■□□□□ 0.07
COL20A1-206ENST00000479501 RAD9BQ6WBX8 426 aa15.52■□□□□ 0.07
COL20A1-206ENST00000479501 VPS52Q8N1B4 723 aa15.52■□□□□ 0.07
COL20A1-206ENST00000479501 RAB20Q9NX57 234 aa15.52■□□□□ 0.07
COL20A1-206ENST00000479501 SEL1LQ9UBV2 794 aa15.52■□□□□ 0.07
COL20A1-206ENST00000479501 TADA3O75528 432 aa15.51■□□□□ 0.07
COL20A1-206ENST00000479501 PALMO75781 387 aa15.51■□□□□ 0.07
COL20A1-206ENST00000479501 PSAPP07602 524 aa15.51■□□□□ 0.07
COL20A1-206ENST00000479501 RASGRP2Q7LDG7 609 aa15.51■□□□□ 0.07
COL20A1-206ENST00000479501 LRP10Q7Z4F1 713 aa15.51■□□□□ 0.07
COL20A1-206ENST00000479501 RPAINQ86UA6 219 aa15.51■□□□□ 0.07
COL20A1-206ENST00000479501 MIPOL1Q8TD10 442 aa15.51■□□□□ 0.07
COL20A1-206ENST00000479501 MGARPQ8TDB4 240 aa15.51■□□□□ 0.07
COL20A1-206ENST00000479501 TBC1D22BQ9NU19 505 aa15.51■□□□□ 0.07
COL20A1-206ENST00000479501 PDXDC2PQ6P474 469 aa15.51■□□□□ 0.07
COL20A1-206ENST00000479501 DAGLBQ8NCG7 672 aa15.51■□□□□ 0.07
COL20A1-206ENST00000479501 GRK7Q8WTQ7 553 aa15.51■□□□□ 0.07
COL20A1-206ENST00000479501 HOMER3Q9NSC5 361 aa15.51■□□□□ 0.07
COL20A1-206ENST00000479501 PCDHB4Q9Y5E5 795 aa15.51■□□□□ 0.07
COL20A1-206ENST00000479501 GYS1P13807 737 aa15.51■□□□□ 0.07
COL20A1-206ENST00000479501 ATF7P17544 494 aaPredicted RBP15.51■□□□□ 0.07
COL20A1-206ENST00000479501 CEP55Q53EZ4 464 aa15.51■□□□□ 0.07
COL20A1-206ENST00000479501 DPY19L2Q6NUT2 758 aa15.51■□□□□ 0.07
COL20A1-206ENST00000479501 UHMK1Q8TAS1 419 aaKnown RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms