RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 ARHGAP4P98171 946 aa7.64□□□□□ -1.19
VCP-205ENST00000479300 PTH1RQ03431 593 aa7.64□□□□□ -1.19
VCP-205ENST00000479300 COASYQ13057 564 aa7.64□□□□□ -1.19
VCP-205ENST00000479300 GRM4Q14833 912 aa7.64□□□□□ -1.19
VCP-205ENST00000479300 SEC23AQ15436 765 aa7.64□□□□□ -1.19
VCP-205ENST00000479300 MARCH8Q5T0T0 291 aa7.64□□□□□ -1.19
VCP-205ENST00000479300 KCNV1Q6PIU1 500 aa7.64□□□□□ -1.19
VCP-205ENST00000479300 CYB5R4Q7L1T6 521 aa7.64□□□□□ -1.19
VCP-205ENST00000479300 CENPQQ7L2Z9 268 aaPredicted RBP7.64□□□□□ -1.19
VCP-205ENST00000479300 CYFIP1Q7L576 1253 aa7.64□□□□□ -1.19
VCP-205ENST00000479300 FBXL6Q8N531 539 aa7.64□□□□□ -1.19
VCP-205ENST00000479300 EFHBQ8N7U6 833 aa7.64□□□□□ -1.19
VCP-205ENST00000479300 APBB2Q92870 758 aa7.64□□□□□ -1.19
VCP-205ENST00000479300 CUL5Q93034 780 aa7.64□□□□□ -1.19
VCP-205ENST00000479300 NAP1L5Q96NT1 182 aaPredicted RBP7.64□□□□□ -1.19
VCP-205ENST00000479300 INPP4AQ96PE3 977 aaPredicted RBP7.64□□□□□ -1.19
VCP-205ENST00000479300 LZTS2Q9BRK4 669 aa7.64□□□□□ -1.19
VCP-205ENST00000479300 MLXIPQ9HAP2 919 aa7.64□□□□□ -1.19
VCP-205ENST00000479300 SEC63Q9UGP8 760 aaKnown RBP7.64□□□□□ -1.19
VCP-205ENST00000479300 MAD2L2Q9UI95 211 aa7.64□□□□□ -1.19
VCP-205ENST00000479300 USP15Q9Y4E8 981 aaPredicted RBP7.64□□□□□ -1.19
VCP-205ENST00000479300 RBM8AQ9Y5S9 174 aaKnown RBP7.64□□□□□ -1.19
VCP-205ENST00000479300 CACNA1AO00555 2505 aa7.64□□□□□ -1.19
VCP-205ENST00000479300 RIF1Q5UIP0 2472 aaKnown RBP7.64□□□□□ -1.19
VCP-205ENST00000479300 GVINP1Q7Z2Y8 2422 aa7.63□□□□□ -1.19
VCP-205ENST00000479300 BAZ2BQ9UIF8 2168 aaKnown RBP7.63□□□□□ -1.19
VCP-205ENST00000479300 ZNF292O60281 2723 aa7.63□□□□□ -1.19
VCP-205ENST00000479300 PNMA6FA0A0J9YX94 578 aa7.63□□□□□ -1.19
VCP-205ENST00000479300 PALM3A6NDB9 673 aaPredicted RBP7.63□□□□□ -1.19
VCP-205ENST00000479300 SPATA31C2B4DYI2 1134 aa7.63□□□□□ -1.19
VCP-205ENST00000479300 PRC1O43663 620 aa7.63□□□□□ -1.19
VCP-205ENST00000479300 CYTH3O43739 400 aa7.63□□□□□ -1.19
VCP-205ENST00000479300 GFRA3O60609 400 aa7.63□□□□□ -1.19
VCP-205ENST00000479300 CALM1P0DP23 149 aa7.63□□□□□ -1.19
VCP-205ENST00000479300 CALM2P0DP24 149 aa7.63□□□□□ -1.19
VCP-205ENST00000479300 CALM3P0DP25 149 aa7.63□□□□□ -1.19
VCP-205ENST00000479300 ARP10275 920 aa7.63□□□□□ -1.19
VCP-205ENST00000479300 CD44P16070 742 aaKnown RBP7.63□□□□□ -1.19
VCP-205ENST00000479300 CCND2P30279 289 aa7.63□□□□□ -1.19
VCP-205ENST00000479300 ICAM3P32942 547 aa7.63□□□□□ -1.19
VCP-205ENST00000479300 MCM5P33992 734 aa7.63□□□□□ -1.19
VCP-205ENST00000479300 NRIP1P48552 1158 aa7.63□□□□□ -1.19
VCP-205ENST00000479300 NDUFV1P49821 464 aa7.63□□□□□ -1.19
VCP-205ENST00000479300 BTG3Q14201 252 aaPredicted RBP7.63□□□□□ -1.19
VCP-205ENST00000479300 FBXO47Q5MNV8 452 aa7.63□□□□□ -1.19
VCP-205ENST00000479300 METTL7BQ6UX53 244 aa7.63□□□□□ -1.19
VCP-205ENST00000479300 FCHSD1Q86WN1 690 aa7.63□□□□□ -1.19
VCP-205ENST00000479300 SUSD6Q92537 303 aa7.63□□□□□ -1.19
VCP-205ENST00000479300 MAP4K1Q92918 833 aa7.63□□□□□ -1.19
VCP-205ENST00000479300 RRP36Q96EU6 259 aaKnown RBP7.63□□□□□ -1.19
VCP-205ENST00000479300 TMEM87BQ96K49 555 aa7.63□□□□□ -1.19
VCP-205ENST00000479300 MTA3Q9BTC8 594 aa7.63□□□□□ -1.19
VCP-205ENST00000479300 IL25Q9H293 177 aa7.63□□□□□ -1.19
VCP-205ENST00000479300 SENP2Q9HC62 589 aa7.63□□□□□ -1.19
VCP-205ENST00000479300 ANO2Q9NQ90 1003 aa7.63□□□□□ -1.19
VCP-205ENST00000479300 HCSTQ9UBK5 93 aa7.63□□□□□ -1.19
VCP-205ENST00000479300 MBLAC1A4D2B0 266 aaPredicted RBP7.62□□□□□ -1.19
VCP-205ENST00000479300 DDAH1O94760 285 aa7.62□□□□□ -1.19
VCP-205ENST00000479300 AVPR2P30518 371 aa7.62□□□□□ -1.19
VCP-205ENST00000479300 CD52P31358 61 aa7.62□□□□□ -1.19
VCP-205ENST00000479300 FGD1P98174 961 aa7.62□□□□□ -1.19
VCP-205ENST00000479300 SP4Q02446 784 aa7.62□□□□□ -1.19
VCP-205ENST00000479300 SIGLEC14Q08ET2 396 aa7.62□□□□□ -1.19
VCP-205ENST00000479300 GNPTABQ3T906 1256 aa7.62□□□□□ -1.19
VCP-205ENST00000479300 PAN2Q504Q3 1202 aaKnown RBP7.62□□□□□ -1.19
VCP-205ENST00000479300 UTP14CQ5TAP6 766 aaKnown RBP7.62□□□□□ -1.19
VCP-205ENST00000479300 ASCL5Q7RTU5 278 aa7.62□□□□□ -1.19
VCP-205ENST00000479300 RBM23Q86U06 439 aaKnown RBP7.62□□□□□ -1.19
VCP-205ENST00000479300 ZNF654Q8IZM8 581 aa7.62□□□□□ -1.19
VCP-205ENST00000479300 KLHL23Q8NBE8 558 aa7.62□□□□□ -1.19
VCP-205ENST00000479300 SMARCC2Q8TAQ2 1214 aa7.62□□□□□ -1.19
VCP-205ENST00000479300 ATP8B4Q8TF62 1192 aa7.62□□□□□ -1.19
VCP-205ENST00000479300 POF1BQ8WVV4 589 aa7.62□□□□□ -1.19
VCP-205ENST00000479300 DNAJB3Q8WWF6 145 aa7.62□□□□□ -1.19
VCP-205ENST00000479300 PIBF1Q8WXW3 757 aa7.62□□□□□ -1.19
VCP-205ENST00000479300 P2RX5Q93086 422 aa7.62□□□□□ -1.19
VCP-205ENST00000479300 PIGSQ96S52 555 aa7.62□□□□□ -1.19
VCP-205ENST00000479300 MAP3K14Q99558 947 aa7.62□□□□□ -1.19
VCP-205ENST00000479300 ESYT1Q9BSJ8 1104 aa7.62□□□□□ -1.19
VCP-205ENST00000479300 PLVAPQ9BX97 442 aa7.62□□□□□ -1.19
VCP-205ENST00000479300 USP26Q9BXU7 913 aa7.62□□□□□ -1.19
VCP-205ENST00000479300 PDCL3Q9H2J4 239 aa7.62□□□□□ -1.19
VCP-205ENST00000479300 RTEL1Q9NZ71 1219 aa7.62□□□□□ -1.19
VCP-205ENST00000479300 CDH22Q9UJ99 828 aa7.62□□□□□ -1.19
VCP-205ENST00000479300 RWDD3Q9Y3V2 267 aa7.62□□□□□ -1.19
VCP-205ENST00000479300 CDY2AQ9Y6F7 541 aa7.62□□□□□ -1.19
VCP-205ENST00000479300 PTPRZ1P23471 2315 aaPredicted RBP7.62□□□□□ -1.19
VCP-205ENST00000479300 FAM186AA6NE01 2351 aa7.61□□□□□ -1.19
VCP-205ENST00000479300 NRCAMQ92823 1304 aa7.61□□□□□ -1.19
VCP-205ENST00000479300 GSTTP1A0A1W2PQM5 241 aa7.61□□□□□ -1.19
VCP-205ENST00000479300 H0Y858 1186 aa7.61□□□□□ -1.19
VCP-205ENST00000479300 NOP56O00567 594 aaKnown RBP7.61□□□□□ -1.19
VCP-205ENST00000479300 PER2O15055 1255 aa7.61□□□□□ -1.19
VCP-205ENST00000479300 ATP9AO75110 1047 aa7.61□□□□□ -1.19
VCP-205ENST00000479300 STAM2O75886 525 aa7.61□□□□□ -1.19
VCP-205ENST00000479300 GNAT1P11488 350 aa7.61□□□□□ -1.19
VCP-205ENST00000479300 KCNC3Q14003 757 aa7.61□□□□□ -1.19
VCP-205ENST00000479300 TSHZ1Q6ZSZ6 1077 aa7.61□□□□□ -1.19
VCP-205ENST00000479300 SUGP1Q8IWZ8 645 aaKnown RBP7.61□□□□□ -1.19
VCP-205ENST00000479300 CMTR2Q8IYT2 770 aaKnown RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms