RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 RBM10P98175 930 aaKnown RBP19.73■□□□□ 0.75
VIM-204ENST00000478746 WTAPQ15007 396 aa19.73■□□□□ 0.75
VIM-204ENST00000478746 PTPN21Q16825 1174 aa19.73■□□□□ 0.75
VIM-204ENST00000478746 CATIPQ7Z7H3 387 aa19.73■□□□□ 0.75
VIM-204ENST00000478746 TNPO1Q92973 898 aaKnown RBP19.73■□□□□ 0.75
VIM-204ENST00000478746 NEK1Q96PY6 1258 aa19.73■□□□□ 0.75
VIM-204ENST00000478746 CDCA3Q99618 268 aaPredicted RBP19.73■□□□□ 0.75
VIM-204ENST00000478746 CELF4Q9BZC1 486 aaKnown RBP19.73■□□□□ 0.75
VIM-204ENST00000478746 TLR9Q9NR96 1032 aa19.73■□□□□ 0.75
VIM-204ENST00000478746 AAASQ9NRG9 546 aa19.73■□□□□ 0.75
VIM-204ENST00000478746 PCDHB7Q9Y5E2 793 aa19.73■□□□□ 0.75
VIM-204ENST00000478746 ITGB5P18084 799 aa19.72■□□□□ 0.75
VIM-204ENST00000478746 SART3Q15020 963 aaKnown RBP19.72■□□□□ 0.75
VIM-204ENST00000478746 DUSP6Q16828 381 aa19.72■□□□□ 0.75
VIM-204ENST00000478746 RRP36Q96EU6 259 aaKnown RBP19.72■□□□□ 0.75
VIM-204ENST00000478746 PLXNA4Q9HCM2 1894 aa19.72■□□□□ 0.75
VIM-204ENST00000478746 PKD2L1Q9P0L9 805 aa19.72■□□□□ 0.75
VIM-204ENST00000478746 PCDHA2Q9Y5H9 948 aa19.72■□□□□ 0.75
VIM-204ENST00000478746 IGSF9BQ9UPX0 1349 aa19.72■□□□□ 0.75
VIM-204ENST00000478746 LOXHD1Q8IVV2 1947 aa19.71■□□□□ 0.75
VIM-204ENST00000478746 H0Y858 1186 aa19.71■□□□□ 0.75
VIM-204ENST00000478746 SARSP49591 514 aaKnown RBP19.71■□□□□ 0.75
VIM-204ENST00000478746 FOXK2Q01167 660 aa19.71■□□□□ 0.75
VIM-204ENST00000478746 NFX1Q12986 1120 aaKnown RBP19.71■□□□□ 0.75
VIM-204ENST00000478746 MTMR1Q13613 665 aa19.71■□□□□ 0.75
VIM-204ENST00000478746 PDE12Q6L8Q7 609 aaKnown RBP19.71■□□□□ 0.75
VIM-204ENST00000478746 ZBTB33Q86T24 672 aa19.71■□□□□ 0.75
VIM-204ENST00000478746 CHD1LQ86WJ1 897 aa19.71■□□□□ 0.75
VIM-204ENST00000478746 NME8Q8N427 588 aa19.71■□□□□ 0.75
VIM-204ENST00000478746 VN1R2Q8NFZ6 395 aa19.71■□□□□ 0.75
VIM-204ENST00000478746 TMX1Q9H3N1 280 aa19.71■□□□□ 0.75
VIM-204ENST00000478746 AZI2Q9H6S1 392 aa19.71■□□□□ 0.75
VIM-204ENST00000478746 TMEM260Q9NX78 707 aa19.71■□□□□ 0.75
VIM-204ENST00000478746 MAFGO15525 162 aa19.7■□□□□ 0.74
VIM-204ENST00000478746 FGF18O76093 207 aa19.7■□□□□ 0.74
VIM-204ENST00000478746 SRGAP2BP0DMP2 458 aa19.7■□□□□ 0.74
VIM-204ENST00000478746 NUBP1P53384 320 aa19.7■□□□□ 0.74
VIM-204ENST00000478746 ERVFC1P60507 584 aa19.7■□□□□ 0.74
VIM-204ENST00000478746 SMC5Q8IY18 1101 aa19.7■□□□□ 0.74
VIM-204ENST00000478746 THNSL1Q8IYQ7 743 aa19.7■□□□□ 0.74
VIM-204ENST00000478746 RIPOR3Q96MK2 946 aa19.7■□□□□ 0.74
VIM-204ENST00000478746 PCYT2Q99447 389 aa19.7■□□□□ 0.74
VIM-204ENST00000478746 S1PR5Q9H228 398 aa19.7■□□□□ 0.74
VIM-204ENST00000478746 RNF216Q9NWF9 866 aaPredicted RBP19.7■□□□□ 0.74
VIM-204ENST00000478746 SEC63Q9UGP8 760 aaKnown RBP19.7■□□□□ 0.74
VIM-204ENST00000478746 TRPC6Q9Y210 931 aa19.7■□□□□ 0.74
VIM-204ENST00000478746 UBIAD1Q9Y5Z9 338 aa19.7■□□□□ 0.74
VIM-204ENST00000478746 U3KPZ7 1027 aaPredicted RBP19.7■□□□□ 0.74
VIM-204ENST00000478746 TBKBP1A7MCY6 615 aa19.69■□□□□ 0.74
VIM-204ENST00000478746 TECP42680 631 aa19.69■□□□□ 0.74
VIM-204ENST00000478746 KRT76Q01546 638 aa19.69■□□□□ 0.74
VIM-204ENST00000478746 TMEM266Q2M3C6 531 aa19.69■□□□□ 0.74
VIM-204ENST00000478746 TMEM184AQ6ZMB5 413 aa19.69■□□□□ 0.74
VIM-204ENST00000478746 RALYLQ86SE5 291 aaKnown RBP19.69■□□□□ 0.74
VIM-204ENST00000478746 TRAPPC12Q8WVT3 735 aa19.69■□□□□ 0.74
VIM-204ENST00000478746 SPZ1Q9BXG8 430 aa19.69■□□□□ 0.74
VIM-204ENST00000478746 IL25Q9H293 177 aa19.69■□□□□ 0.74
VIM-204ENST00000478746 RWDD1Q9H446 243 aaPredicted RBP19.69■□□□□ 0.74
VIM-204ENST00000478746 PSTPIP2Q9H939 334 aa19.69■□□□□ 0.74
VIM-204ENST00000478746 KDM3AQ9Y4C1 1321 aa19.69■□□□□ 0.74
VIM-204ENST00000478746 SPTBN4Q9H254 2564 aa19.68■□□□□ 0.74
VIM-204ENST00000478746 SMIM35A0A1B0GVV1 85 aa19.68■□□□□ 0.74
VIM-204ENST00000478746 CYP21A2P08686 494 aa19.68■□□□□ 0.74
VIM-204ENST00000478746 FAM102BQ5T8I3 360 aa19.68■□□□□ 0.74
VIM-204ENST00000478746 ANKRD54Q6NXT1 300 aa19.68■□□□□ 0.74
VIM-204ENST00000478746 FAM43BQ6ZT52 329 aaPredicted RBP19.68■□□□□ 0.74
VIM-204ENST00000478746 NCOA7Q8NI08 942 aa19.68■□□□□ 0.74
VIM-204ENST00000478746 APOL5Q9BWW9 433 aa19.68■□□□□ 0.74
VIM-204ENST00000478746 JADE2Q9NQC1 790 aa19.68■□□□□ 0.74
VIM-204ENST00000478746 TYW1Q9NV66 732 aaKnown RBP19.68■□□□□ 0.74
VIM-204ENST00000478746 SLC9A2Q9UBY0 812 aa19.68■□□□□ 0.74
VIM-204ENST00000478746 DENND3A2RUS2 1198 aa19.67■□□□□ 0.74
VIM-204ENST00000478746 PROB1E7EW31 1015 aa19.67■□□□□ 0.74
VIM-204ENST00000478746 FSCN2O14926 492 aa19.67■□□□□ 0.74
VIM-204ENST00000478746 GALR2O43603 387 aaPredicted RBP19.67■□□□□ 0.74
VIM-204ENST00000478746 MGEA5O60502 916 aa19.67■□□□□ 0.74
VIM-204ENST00000478746 PDGFBP01127 241 aaPredicted RBP19.67■□□□□ 0.74
VIM-204ENST00000478746 SMARCA1P28370 1054 aa19.67■□□□□ 0.74
VIM-204ENST00000478746 KIF5BP33176 963 aa19.67■□□□□ 0.74
VIM-204ENST00000478746 NUCB1Q02818 461 aa19.67■□□□□ 0.74
VIM-204ENST00000478746 PLCB4Q15147 1175 aa19.67■□□□□ 0.74
VIM-204ENST00000478746 PLPPR4Q7Z2D5 763 aa19.67■□□□□ 0.74
VIM-204ENST00000478746 COLGALT1Q8NBJ5 622 aa19.67■□□□□ 0.74
VIM-204ENST00000478746 CTCFLQ8NI51 663 aaPredicted RBP19.67■□□□□ 0.74
VIM-204ENST00000478746 MAP3K14Q99558 947 aa19.67■□□□□ 0.74
VIM-204ENST00000478746 ADAM2Q99965 735 aa19.67■□□□□ 0.74
VIM-204ENST00000478746 JPH1Q9HDC5 661 aaPredicted RBP19.67■□□□□ 0.74
VIM-204ENST00000478746 C1orf112Q9NSG2 853 aa19.67■□□□□ 0.74
VIM-204ENST00000478746 PUF60Q9UHX1 559 aaKnown RBP19.67■□□□□ 0.74
VIM-204ENST00000478746 GINS2Q9Y248 185 aa19.67■□□□□ 0.74
VIM-204ENST00000478746 RPS6KA5O75582 802 aa19.66■□□□□ 0.74
VIM-204ENST00000478746 SP100P23497 879 aaPredicted RBP19.66■□□□□ 0.74
VIM-204ENST00000478746 STAT5BP51692 787 aa19.66■□□□□ 0.74
VIM-204ENST00000478746 KCNC3Q14003 757 aa19.66■□□□□ 0.74
VIM-204ENST00000478746 ODR4Q5SWX8 454 aa19.66■□□□□ 0.74
VIM-204ENST00000478746 PLPP4Q5VZY2 271 aa19.66■□□□□ 0.74
VIM-204ENST00000478746 SYCE2Q6PIF2 218 aa19.66■□□□□ 0.74
VIM-204ENST00000478746 MTHFD1LQ6UB35 978 aa19.66■□□□□ 0.74
VIM-204ENST00000478746 SLC24A5Q71RS6 500 aa19.66■□□□□ 0.74
VIM-204ENST00000478746 KREMEN2Q8NCW0 462 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms