RNA–Protein interactions for RNA: ENST00000478737.5

SCAMP3-206, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 649 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-206ENST00000478737 WDR64B1ANS9 1081 aa11.25□□□□□ -0.61
SCAMP3-206ENST00000478737 DDX39AO00148 427 aaKnown RBP11.25□□□□□ -0.61
SCAMP3-206ENST00000478737 SLC37A4O43826 429 aa11.25□□□□□ -0.61
SCAMP3-206ENST00000478737 HBP1O60381 514 aa11.25□□□□□ -0.61
SCAMP3-206ENST00000478737 GAS7O60861 476 aa11.25□□□□□ -0.61
SCAMP3-206ENST00000478737 NBNO60934 754 aa11.25□□□□□ -0.61
SCAMP3-206ENST00000478737 RPLP2P05387 115 aaKnown RBP11.25□□□□□ -0.61
SCAMP3-206ENST00000478737 PSAPP07602 524 aa11.25□□□□□ -0.61
SCAMP3-206ENST00000478737 PDCP20941 246 aa11.25□□□□□ -0.61
SCAMP3-206ENST00000478737 SFNP31947 248 aa11.25□□□□□ -0.61
SCAMP3-206ENST00000478737 MBTPS1Q14703 1052 aa11.25□□□□□ -0.61
SCAMP3-206ENST00000478737 GRIK4Q16099 956 aa11.25□□□□□ -0.61
SCAMP3-206ENST00000478737 LETM2Q2VYF4 491 aa11.25□□□□□ -0.61
SCAMP3-206ENST00000478737 ZNF618Q5T7W0 954 aa11.25□□□□□ -0.61
SCAMP3-206ENST00000478737 FAM160B1Q5W0V3 765 aa11.25□□□□□ -0.61
SCAMP3-206ENST00000478737 POTEBQ6S5H4 581 aa11.25□□□□□ -0.61
SCAMP3-206ENST00000478737 HAS1Q92839 578 aa11.25□□□□□ -0.61
SCAMP3-206ENST00000478737 ZNF302Q9NR11 478 aa11.25□□□□□ -0.61
SCAMP3-206ENST00000478737 DISC1Q9NRI5 854 aa11.25□□□□□ -0.61
SCAMP3-206ENST00000478737 CXXC1Q9P0U4 656 aaPredicted RBP11.25□□□□□ -0.61
SCAMP3-206ENST00000478737 DDX25Q9UHL0 483 aaKnown RBP11.25□□□□□ -0.61
SCAMP3-206ENST00000478737 SZT2Q5T011 3432 aa11.25□□□□□ -0.61
SCAMP3-206ENST00000478737 TRIP12Q14669 1992 aaPredicted RBP11.25□□□□□ -0.61
SCAMP3-206ENST00000478737 RSPH10B2B2RC85 870 aa11.24□□□□□ -0.61
SCAMP3-206ENST00000478737 ZBTB42B2RXF5 422 aa11.24□□□□□ -0.61
SCAMP3-206ENST00000478737 BACH1O14867 736 aa11.24□□□□□ -0.61
SCAMP3-206ENST00000478737 RSPH10BP0C881 870 aa11.24□□□□□ -0.61
SCAMP3-206ENST00000478737 MARK3P27448 753 aa11.24□□□□□ -0.61
SCAMP3-206ENST00000478737 THPOP40225 353 aa11.24□□□□□ -0.61
SCAMP3-206ENST00000478737 JAK3P52333 1124 aa11.24□□□□□ -0.61
SCAMP3-206ENST00000478737 PPP2R5CQ13362 524 aa11.24□□□□□ -0.61
SCAMP3-206ENST00000478737 LRCH2Q5VUJ6 765 aa11.24□□□□□ -0.61
SCAMP3-206ENST00000478737 LARP1BQ659C4 914 aaKnown RBP11.24□□□□□ -0.61
SCAMP3-206ENST00000478737 MCTP1Q6DN14 999 aa11.24□□□□□ -0.61
SCAMP3-206ENST00000478737 OTOP2Q7RTS6 562 aa11.24□□□□□ -0.61
SCAMP3-206ENST00000478737 BBXQ8WY36 941 aaPredicted RBP11.24□□□□□ -0.61
SCAMP3-206ENST00000478737 GJA10Q969M2 543 aa11.24□□□□□ -0.61
SCAMP3-206ENST00000478737 UIMC1Q96RL1 719 aa11.24□□□□□ -0.61
SCAMP3-206ENST00000478737 TEKT3Q9BXF9 490 aa11.24□□□□□ -0.61
SCAMP3-206ENST00000478737 FOXP1Q9H334 677 aaPredicted RBP11.24□□□□□ -0.61
SCAMP3-206ENST00000478737 TUBE1Q9UJT0 475 aa11.24□□□□□ -0.61
SCAMP3-206ENST00000478737 PCDHA2Q9Y5H9 948 aa11.24□□□□□ -0.61
SCAMP3-206ENST00000478737 KIF28PB7ZC32 967 aa11.23□□□□□ -0.61
SCAMP3-206ENST00000478737 ZNF862O60290 1169 aa11.23□□□□□ -0.61
SCAMP3-206ENST00000478737 TRAK2O60296 914 aa11.23□□□□□ -0.61
SCAMP3-206ENST00000478737 CCNT1O60563 726 aaKnown RBP11.23□□□□□ -0.61
SCAMP3-206ENST00000478737 BAIAP3O94812 1187 aa11.23□□□□□ -0.61
SCAMP3-206ENST00000478737 CHRNA1P02708 482 aa11.23□□□□□ -0.61
SCAMP3-206ENST00000478737 U2AF2P26368 475 aaKnown RBP eCLIP11.23□□□□□ -0.617e-8■□□□□ 11
SCAMP3-206ENST00000478737 MKRN4PQ13434 485 aaPredicted RBP11.23□□□□□ -0.61
SCAMP3-206ENST00000478737 ZNF484Q5JVG2 852 aa11.23□□□□□ -0.61
SCAMP3-206ENST00000478737 PDXDC2PQ6P474 469 aa11.23□□□□□ -0.61
SCAMP3-206ENST00000478737 MTHFD1LQ6UB35 978 aa11.23□□□□□ -0.61
SCAMP3-206ENST00000478737 RUFY4Q6ZNE9 571 aa11.23□□□□□ -0.61
SCAMP3-206ENST00000478737 DEFB128Q7Z7B8 93 aa11.23□□□□□ -0.61
SCAMP3-206ENST00000478737 SLFN12Q8IYM2 578 aa11.23□□□□□ -0.61
SCAMP3-206ENST00000478737 NME8Q8N427 588 aa11.23□□□□□ -0.61
SCAMP3-206ENST00000478737 PHOSPHO2Q8TCD6 241 aa11.23□□□□□ -0.61
SCAMP3-206ENST00000478737 MTIF3Q9H2K0 278 aaKnown RBP11.23□□□□□ -0.61
SCAMP3-206ENST00000478737 UNC45AQ9H3U1 944 aa11.23□□□□□ -0.61
SCAMP3-206ENST00000478737 GABBR1Q9UBS5 961 aa11.23□□□□□ -0.61
SCAMP3-206ENST00000478737 VAV3Q9UKW4 847 aa11.23□□□□□ -0.61
SCAMP3-206ENST00000478737 TRPC6Q9Y210 931 aa11.23□□□□□ -0.61
SCAMP3-206ENST00000478737 IGSF9BQ9UPX0 1349 aa11.23□□□□□ -0.61
SCAMP3-206ENST00000478737 COL1A2P08123 1366 aa11.23□□□□□ -0.61
SCAMP3-206ENST00000478737 LAMA2P24043 3122 aaKnown RBP11.22□□□□□ -0.61
SCAMP3-206ENST00000478737 TMEM265A0A087WTH1 108 aa11.22□□□□□ -0.61
SCAMP3-206ENST00000478737 SMIM35A0A1B0GVV1 85 aa11.22□□□□□ -0.61
SCAMP3-206ENST00000478737 ABHD14A-ACY1A0A1B0GW23 586 aa11.22□□□□□ -0.61
SCAMP3-206ENST00000478737 STBD1O95210 358 aa11.22□□□□□ -0.61
SCAMP3-206ENST00000478737 ACTN1P12814 892 aa11.22□□□□□ -0.61
SCAMP3-206ENST00000478737 KLRC1P26715 233 aa11.22□□□□□ -0.61
SCAMP3-206ENST00000478737 SPIRE1Q08AE8 756 aa11.22□□□□□ -0.61
SCAMP3-206ENST00000478737 PLEKHG4Q58EX7 1191 aa11.22□□□□□ -0.61
SCAMP3-206ENST00000478737 CNKSR3Q6P9H4 555 aa11.22□□□□□ -0.61
SCAMP3-206ENST00000478737 FAM43BQ6ZT52 329 aaPredicted RBP11.22□□□□□ -0.61
SCAMP3-206ENST00000478737 RSPH3Q86UC2 560 aa11.22□□□□□ -0.61
SCAMP3-206ENST00000478737 NOSTRINQ8IVI9 506 aa11.22□□□□□ -0.61
SCAMP3-206ENST00000478737 FAM167AQ96KS9 214 aa11.22□□□□□ -0.61
SCAMP3-206ENST00000478737 MTMR9Q96QG7 549 aa11.22□□□□□ -0.61
SCAMP3-206ENST00000478737 NIFKQ9BYG3 293 aaKnown RBP11.22□□□□□ -0.61
SCAMP3-206ENST00000478737 TCEAL9Q9UHQ7 104 aa11.22□□□□□ -0.61
SCAMP3-206ENST00000478737 SAMM50Q9Y512 469 aa11.22□□□□□ -0.61
SCAMP3-206ENST00000478737 SLC4A7Q9Y6M7 1214 aa11.22□□□□□ -0.61
SCAMP3-206ENST00000478737 SQORQ9Y6N5 450 aa11.22□□□□□ -0.61
SCAMP3-206ENST00000478737 KDM3AQ9Y4C1 1321 aa11.21□□□□□ -0.61
SCAMP3-206ENST00000478737 EML1O00423 815 aa11.21□□□□□ -0.61
SCAMP3-206ENST00000478737 WNT7AO00755 349 aa11.21□□□□□ -0.61
SCAMP3-206ENST00000478737 MAGEB2O15479 319 aa11.21□□□□□ -0.61
SCAMP3-206ENST00000478737 EFCAB14O75071 495 aa11.21□□□□□ -0.61
SCAMP3-206ENST00000478737 PDIA4P13667 645 aaKnown RBP11.21□□□□□ -0.61
SCAMP3-206ENST00000478737 SYT1P21579 422 aa11.21□□□□□ -0.61
SCAMP3-206ENST00000478737 TRAPPC10P48553 1259 aa11.21□□□□□ -0.61
SCAMP3-206ENST00000478737 MGAT3Q09327 533 aa11.21□□□□□ -0.61
SCAMP3-206ENST00000478737 ORC2Q13416 577 aaPredicted RBP11.21□□□□□ -0.61
SCAMP3-206ENST00000478737 TARBP2Q15633 366 aaKnown RBP11.21□□□□□ -0.61
SCAMP3-206ENST00000478737 TCTN1Q2MV58 587 aa11.21□□□□□ -0.61
SCAMP3-206ENST00000478737 MIER3Q7Z3K6 550 aa11.21□□□□□ -0.61
SCAMP3-206ENST00000478737 POTEDQ86YR6 584 aa11.21□□□□□ -0.61
SCAMP3-206ENST00000478737 KIAA0319LQ8IZA0 1049 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms