RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 HBP1O60381 514 aa17.59■□□□□ 0.41
HMGA1-206ENST00000478214 CAND2O75155 1236 aa17.59■□□□□ 0.41
HMGA1-206ENST00000478214 JAK3P52333 1124 aa17.59■□□□□ 0.41
HMGA1-206ENST00000478214 GPR153Q6NV75 609 aa17.59■□□□□ 0.41
HMGA1-206ENST00000478214 TAF2Q6P1X5 1199 aa17.59■□□□□ 0.41
HMGA1-206ENST00000478214 TRMT1LQ7Z2T5 733 aaKnown RBP17.59■□□□□ 0.41
HMGA1-206ENST00000478214 MIER3Q7Z3K6 550 aa17.59■□□□□ 0.41
HMGA1-206ENST00000478214 HAS1Q92839 578 aa17.59■□□□□ 0.41
HMGA1-206ENST00000478214 OSBPL7Q9BZF2 842 aa17.59■□□□□ 0.41
HMGA1-206ENST00000478214 TANC1Q9C0D5 1861 aa17.58■□□□□ 0.41
HMGA1-206ENST00000478214 ZNF862O60290 1169 aa17.58■□□□□ 0.4
HMGA1-206ENST00000478214 SLC34A2O95436 690 aa17.58■□□□□ 0.4
HMGA1-206ENST00000478214 ACTN1P12814 892 aa17.58■□□□□ 0.4
HMGA1-206ENST00000478214 SFNP31947 248 aa17.58■□□□□ 0.4
HMGA1-206ENST00000478214 UGCGQ16739 394 aa17.58■□□□□ 0.4
HMGA1-206ENST00000478214 TCTN1Q2MV58 587 aa17.58■□□□□ 0.4
HMGA1-206ENST00000478214 Q7L0L9 218 aa17.58■□□□□ 0.4
HMGA1-206ENST00000478214 RPAINQ86UA6 219 aa17.58■□□□□ 0.4
HMGA1-206ENST00000478214 DNAJB3Q8WWF6 145 aa17.58■□□□□ 0.4
HMGA1-206ENST00000478214 FAM20AQ96MK3 541 aa17.58■□□□□ 0.4
HMGA1-206ENST00000478214 FAM49AQ9H0Q0 323 aaPredicted RBP17.58■□□□□ 0.4
HMGA1-206ENST00000478214 SLC4A7Q9Y6M7 1214 aa17.58■□□□□ 0.4
HMGA1-206ENST00000478214 TET1Q8NFU7 2136 aa17.57■□□□□ 0.4
HMGA1-206ENST00000478214 ZBTB42B2RXF5 422 aa17.57■□□□□ 0.4
HMGA1-206ENST00000478214 TBX3O15119 743 aa17.57■□□□□ 0.4
HMGA1-206ENST00000478214 ATP2B1P20020 1258 aa17.57■□□□□ 0.4
HMGA1-206ENST00000478214 ZNF484Q5JVG2 852 aa17.57■□□□□ 0.4
HMGA1-206ENST00000478214 FAM26DQ5JW98 314 aa17.57■□□□□ 0.4
HMGA1-206ENST00000478214 CNKSR3Q6P9H4 555 aa17.57■□□□□ 0.4
HMGA1-206ENST00000478214 RDM1Q8NG50 284 aa17.57■□□□□ 0.4
HMGA1-206ENST00000478214 BBXQ8WY36 941 aaPredicted RBP17.57■□□□□ 0.4
HMGA1-206ENST00000478214 FOXP1Q9H334 677 aaPredicted RBP17.57■□□□□ 0.4
HMGA1-206ENST00000478214 VAV3Q9UKW4 847 aa17.57■□□□□ 0.4
HMGA1-206ENST00000478214 PCDHA2Q9Y5H9 948 aa17.57■□□□□ 0.4
HMGA1-206ENST00000478214 EML1O00423 815 aa17.56■□□□□ 0.4
HMGA1-206ENST00000478214 MARCH6O60337 910 aa17.56■□□□□ 0.4
HMGA1-206ENST00000478214 CHRNA1P02708 482 aa17.56■□□□□ 0.4
HMGA1-206ENST00000478214 KLRC1P26715 233 aa17.56■□□□□ 0.4
HMGA1-206ENST00000478214 PBX2P40425 430 aa17.56■□□□□ 0.4
HMGA1-206ENST00000478214 PPP2R5CQ13362 524 aa17.56■□□□□ 0.4
HMGA1-206ENST00000478214 MTHFD1LQ6UB35 978 aa17.56■□□□□ 0.4
HMGA1-206ENST00000478214 RSPH3Q86UC2 560 aa17.56■□□□□ 0.4
HMGA1-206ENST00000478214 DEFB123Q8N688 67 aa17.56■□□□□ 0.4
HMGA1-206ENST00000478214 COL1A2P08123 1366 aa17.55■□□□□ 0.4
HMGA1-206ENST00000478214 SMIM35A0A1B0GVV1 85 aa17.55■□□□□ 0.4
HMGA1-206ENST00000478214 KIF28PB7ZC32 967 aa17.55■□□□□ 0.4
HMGA1-206ENST00000478214 OATP04181 439 aa17.55■□□□□ 0.4
HMGA1-206ENST00000478214 ATP2A2P16615 1042 aaKnown RBP17.55■□□□□ 0.4
HMGA1-206ENST00000478214 DNAJB2P25686 324 aa17.55■□□□□ 0.4
HMGA1-206ENST00000478214 GJB2P29033 226 aa17.55■□□□□ 0.4
HMGA1-206ENST00000478214 PRKCEQ02156 737 aa17.55■□□□□ 0.4
HMGA1-206ENST00000478214 MGAT3Q09327 533 aa17.55■□□□□ 0.4
HMGA1-206ENST00000478214 GNL2Q13823 731 aaKnown RBP17.55■□□□□ 0.4
HMGA1-206ENST00000478214 DBF4BQ8NFT6 615 aa17.55■□□□□ 0.4
HMGA1-206ENST00000478214 FAM167AQ96KS9 214 aa17.55■□□□□ 0.4
HMGA1-206ENST00000478214 PBX4Q9BYU1 374 aa17.55■□□□□ 0.4
HMGA1-206ENST00000478214 KIF3AQ9Y496 699 aa17.55■□□□□ 0.4
HMGA1-206ENST00000478214 CDY2AQ9Y6F7 541 aa17.55■□□□□ 0.4
HMGA1-206ENST00000478214 KAT6AQ92794 2004 aa17.55■□□□□ 0.4
HMGA1-206ENST00000478214 NEMFO60524 1076 aa17.54■□□□□ 0.4
HMGA1-206ENST00000478214 BAIAP3O94812 1187 aa17.54■□□□□ 0.4
HMGA1-206ENST00000478214 BAG4O95429 457 aaKnown RBP17.54■□□□□ 0.4
HMGA1-206ENST00000478214 MRPS6P82932 125 aaKnown RBP17.54■□□□□ 0.4
HMGA1-206ENST00000478214 TMEM62Q0P6H9 643 aa17.54■□□□□ 0.4
HMGA1-206ENST00000478214 CALCRLQ16602 461 aa17.54■□□□□ 0.4
HMGA1-206ENST00000478214 PLEKHG4Q58EX7 1191 aa17.54■□□□□ 0.4
HMGA1-206ENST00000478214 NOSTRINQ8IVI9 506 aa17.54■□□□□ 0.4
HMGA1-206ENST00000478214 SLFN12Q8IYM2 578 aa17.54■□□□□ 0.4
HMGA1-206ENST00000478214 BANK1Q8NDB2 785 aa17.54■□□□□ 0.4
HMGA1-206ENST00000478214 FAM161BQ96MY7 647 aa17.54■□□□□ 0.4
HMGA1-206ENST00000478214 NRBP2Q9NSY0 501 aa17.54■□□□□ 0.4
HMGA1-206ENST00000478214 ABHD14A-ACY1A0A1B0GW23 586 aa17.53■□□□□ 0.4
HMGA1-206ENST00000478214 C22orf31O95567 290 aa17.53■□□□□ 0.4
HMGA1-206ENST00000478214 GHRP10912 638 aa17.53■□□□□ 0.4
HMGA1-206ENST00000478214 MCM7P33993 719 aa17.53■□□□□ 0.4
HMGA1-206ENST00000478214 KCNJ6P48051 423 aa17.53■□□□□ 0.4
HMGA1-206ENST00000478214 RABGGTBP53611 331 aa17.53■□□□□ 0.4
HMGA1-206ENST00000478214 WDR5P61964 334 aaKnown RBP17.53■□□□□ 0.4
HMGA1-206ENST00000478214 SPIRE1Q08AE8 756 aa17.53■□□□□ 0.4
HMGA1-206ENST00000478214 IKBKEQ14164 716 aa17.53■□□□□ 0.4
HMGA1-206ENST00000478214 ZNF697Q5TEC3 545 aa17.53■□□□□ 0.4
HMGA1-206ENST00000478214 NCAPH2Q6IBW4 605 aa17.53■□□□□ 0.4
HMGA1-206ENST00000478214 KIAA0319LQ8IZA0 1049 aa17.53■□□□□ 0.4
HMGA1-206ENST00000478214 SEPT8Q92599 483 aa17.53■□□□□ 0.4
HMGA1-206ENST00000478214 TIFAQ96CG3 184 aa17.53■□□□□ 0.4
HMGA1-206ENST00000478214 TMEM60Q9H2L4 133 aa17.53■□□□□ 0.4
HMGA1-206ENST00000478214 TTYH1Q9H313 450 aaPredicted RBP17.53■□□□□ 0.4
HMGA1-206ENST00000478214 SMC3Q9UQE7 1217 aa17.53■□□□□ 0.4
HMGA1-206ENST00000478214 TMEM150BA6NC51 233 aa17.52■□□□□ 0.4
HMGA1-206ENST00000478214 STBD1O95210 358 aa17.52■□□□□ 0.4
HMGA1-206ENST00000478214 RPLP2P05387 115 aaKnown RBP17.52■□□□□ 0.4
HMGA1-206ENST00000478214 U2AF2P26368 475 aaKnown RBP eCLIP17.52■□□□□ 0.4
HMGA1-206ENST00000478214 DEFB103AP81534 67 aa17.52■□□□□ 0.4
HMGA1-206ENST00000478214 LPIN1Q14693 890 aa17.52■□□□□ 0.4
HMGA1-206ENST00000478214 EPHA7Q15375 998 aa17.52■□□□□ 0.4
HMGA1-206ENST00000478214 XKR3Q5GH77 459 aa17.52■□□□□ 0.4
HMGA1-206ENST00000478214 IER5Q5VY09 327 aa17.52■□□□□ 0.4
HMGA1-206ENST00000478214 MTMR9Q96QG7 549 aa17.52■□□□□ 0.4
HMGA1-206ENST00000478214 SLC9A7Q96T83 725 aa17.52■□□□□ 0.4
HMGA1-206ENST00000478214 SEMA6BQ9H3T3 888 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms