RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 DYNLL1P63167 89 aaKnown RBP5.59□□□□□ -1.51
SF3B6-202ENST00000478050 NCBP1Q09161 790 aaKnown RBP5.59□□□□□ -1.51
SF3B6-202ENST00000478050 MORC3Q14149 939 aa5.59□□□□□ -1.51
SF3B6-202ENST00000478050 PKN1Q16512 942 aa5.59□□□□□ -1.51
SF3B6-202ENST00000478050 OCLNQ16625 522 aa5.59□□□□□ -1.51
SF3B6-202ENST00000478050 CFAP100Q494V2 611 aa5.59□□□□□ -1.51
SF3B6-202ENST00000478050 SBK1Q52WX2 424 aa5.59□□□□□ -1.51
SF3B6-202ENST00000478050 CCDC178Q5BJE1 867 aa5.59□□□□□ -1.51
SF3B6-202ENST00000478050 SPTY2D1Q68D10 685 aaPredicted RBP5.59□□□□□ -1.51
SF3B6-202ENST00000478050 ISM2Q6H9L7 571 aa5.59□□□□□ -1.51
SF3B6-202ENST00000478050 TMTC3Q6ZXV5 915 aa5.59□□□□□ -1.51
SF3B6-202ENST00000478050 FAM20CQ8IXL6 584 aa5.59□□□□□ -1.51
SF3B6-202ENST00000478050 SMAP1Q8IYB5 467 aaPredicted RBP5.59□□□□□ -1.51
SF3B6-202ENST00000478050 LINC00116Q8NCU8 138 aa5.59□□□□□ -1.51
SF3B6-202ENST00000478050 CTCFLQ8NI51 663 aaPredicted RBP5.59□□□□□ -1.51
SF3B6-202ENST00000478050 ENOX1Q8TC92 643 aaKnown RBP5.59□□□□□ -1.51
SF3B6-202ENST00000478050 NSUN4Q96CB9 384 aaKnown RBP5.59□□□□□ -1.51
SF3B6-202ENST00000478050 ERO1AQ96HE7 468 aa5.59□□□□□ -1.51
SF3B6-202ENST00000478050 PPP1R13BQ96KQ4 1090 aa5.59□□□□□ -1.51
SF3B6-202ENST00000478050 PHF20Q9BVI0 1012 aa5.59□□□□□ -1.51
SF3B6-202ENST00000478050 CABP5Q9NP86 173 aa5.59□□□□□ -1.51
SF3B6-202ENST00000478050 NARFQ9UHQ1 456 aa5.59□□□□□ -1.51
SF3B6-202ENST00000478050 PCDHB6Q9Y5E3 794 aa5.59□□□□□ -1.51
SF3B6-202ENST00000478050 DDX60LQ5H9U9 1706 aaKnown RBP5.59□□□□□ -1.51
SF3B6-202ENST00000478050 PHLPP2Q6ZVD8 1323 aa5.58□□□□□ -1.52
SF3B6-202ENST00000478050 ARHGAP6O43182 974 aa5.58□□□□□ -1.52
SF3B6-202ENST00000478050 ZSCAN12O43309 604 aa5.58□□□□□ -1.52
SF3B6-202ENST00000478050 SLU7O95391 586 aaKnown RBP5.58□□□□□ -1.52
SF3B6-202ENST00000478050 ATP1A3P13637 1013 aa5.58□□□□□ -1.52
SF3B6-202ENST00000478050 ZNF16P17020 682 aaPredicted RBP5.58□□□□□ -1.52
SF3B6-202ENST00000478050 ZNF18P17022 549 aa5.58□□□□□ -1.52
SF3B6-202ENST00000478050 CALML3P27482 149 aa5.58□□□□□ -1.52
SF3B6-202ENST00000478050 MAPK1P28482 360 aa5.58□□□□□ -1.52
SF3B6-202ENST00000478050 ERCC5P28715 1186 aaPredicted RBP5.58□□□□□ -1.52
SF3B6-202ENST00000478050 HIBADHP31937 336 aaKnown RBP5.58□□□□□ -1.52
SF3B6-202ENST00000478050 KIF5BP33176 963 aa5.58□□□□□ -1.52
SF3B6-202ENST00000478050 ECE1P42892 770 aa5.58□□□□□ -1.52
SF3B6-202ENST00000478050 PLCD1P51178 756 aa5.58□□□□□ -1.52
SF3B6-202ENST00000478050 TGFB2P61812 414 aa5.58□□□□□ -1.52
SF3B6-202ENST00000478050 MECOMQ03112 1051 aa5.58□□□□□ -1.52
SF3B6-202ENST00000478050 GRIN1Q05586 938 aa5.58□□□□□ -1.52
SF3B6-202ENST00000478050 PDE4BQ07343 736 aa5.58□□□□□ -1.52
SF3B6-202ENST00000478050 TROAPQ12815 778 aa5.58□□□□□ -1.52
SF3B6-202ENST00000478050 TTC38Q5R3I4 469 aa5.58□□□□□ -1.52
SF3B6-202ENST00000478050 TBC1D9BQ66K14 1250 aa5.58□□□□□ -1.52
SF3B6-202ENST00000478050 E4F1Q66K89 784 aaPredicted RBP5.58□□□□□ -1.52
SF3B6-202ENST00000478050 CTR9Q6PD62 1173 aa5.58□□□□□ -1.52
SF3B6-202ENST00000478050 TXNDC11Q6PKC3 985 aa5.58□□□□□ -1.52
SF3B6-202ENST00000478050 FOXP4Q8IVH2 680 aaPredicted RBP5.58□□□□□ -1.52
SF3B6-202ENST00000478050 FAM177A1Q8N128 213 aaPredicted RBP5.58□□□□□ -1.52
SF3B6-202ENST00000478050 POU5F2Q8N7G0 328 aa5.58□□□□□ -1.52
SF3B6-202ENST00000478050 SPATA20Q8TB22 786 aa5.58□□□□□ -1.52
SF3B6-202ENST00000478050 DPF2Q92785 391 aa5.58□□□□□ -1.52
SF3B6-202ENST00000478050 CELF1Q92879 486 aaKnown RBP5.58□□□□□ -1.52
SF3B6-202ENST00000478050 SPACA7Q96KW9 195 aa5.58□□□□□ -1.52
SF3B6-202ENST00000478050 SETDB2Q96T68 719 aa5.58□□□□□ -1.52
SF3B6-202ENST00000478050 FEZ1Q99689 392 aa5.58□□□□□ -1.52
SF3B6-202ENST00000478050 LACRTQ9GZZ8 138 aa5.58□□□□□ -1.52
SF3B6-202ENST00000478050 CSRNP2Q9H175 543 aa5.58□□□□□ -1.52
SF3B6-202ENST00000478050 TMX1Q9H3N1 280 aa5.58□□□□□ -1.52
SF3B6-202ENST00000478050 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.58□□□□□ -1.52
SF3B6-202ENST00000478050 FANCLQ9NW38 375 aa5.58□□□□□ -1.52
SF3B6-202ENST00000478050 TRMT1Q9NXH9 659 aaKnown RBP5.58□□□□□ -1.52
SF3B6-202ENST00000478050 KCNK4Q9NYG8 393 aa5.58□□□□□ -1.52
SF3B6-202ENST00000478050 VPS54Q9P1Q0 977 aa5.58□□□□□ -1.52
SF3B6-202ENST00000478050 PIM2Q9P1W9 311 aa5.58□□□□□ -1.52
SF3B6-202ENST00000478050 KIAA1522Q9P206 1035 aaPredicted RBP5.58□□□□□ -1.52
SF3B6-202ENST00000478050 LEMD3Q9Y2U8 911 aa5.58□□□□□ -1.52
SF3B6-202ENST00000478050 UBR3Q6ZT12 1888 aa5.58□□□□□ -1.52
SF3B6-202ENST00000478050 LRRC37AA6NMS7 1700 aa5.57□□□□□ -1.52
SF3B6-202ENST00000478050 ROBO3Q96MS0 1386 aa5.57□□□□□ -1.52
SF3B6-202ENST00000478050 CYP2D7A0A087X1C5 515 aa5.57□□□□□ -1.52
SF3B6-202ENST00000478050 RASSF10A6NK89 507 aa5.57□□□□□ -1.52
SF3B6-202ENST00000478050 ICMTO60725 284 aa5.57□□□□□ -1.52
SF3B6-202ENST00000478050 SMNDC1O75940 238 aaKnown RBP eCLIP5.57□□□□□ -1.52
SF3B6-202ENST00000478050 PLEKHA8P1O95397 391 aa5.57□□□□□ -1.52
SF3B6-202ENST00000478050 SLFN14P0C7P3 912 aa5.57□□□□□ -1.52
SF3B6-202ENST00000478050 SCG2P13521 617 aa5.57□□□□□ -1.52
SF3B6-202ENST00000478050 ATP2B1P20020 1258 aa5.57□□□□□ -1.52
SF3B6-202ENST00000478050 CDK11BP21127 795 aaKnown RBP5.57□□□□□ -1.52
SF3B6-202ENST00000478050 BMP6P22004 513 aa5.57□□□□□ -1.52
SF3B6-202ENST00000478050 HOXA10P31260 410 aaPredicted RBP5.57□□□□□ -1.52
SF3B6-202ENST00000478050 GNAQP50148 359 aa5.57□□□□□ -1.52
SF3B6-202ENST00000478050 ETF1P62495 437 aaKnown RBP5.57□□□□□ -1.52
SF3B6-202ENST00000478050 GSTO1P78417 241 aa5.57□□□□□ -1.52
SF3B6-202ENST00000478050 ATP2C1P98194 919 aaPredicted RBP5.57□□□□□ -1.52
SF3B6-202ENST00000478050 TBX2Q13207 712 aaPredicted RBP5.57□□□□□ -1.52
SF3B6-202ENST00000478050 MTMR3Q13615 1198 aa5.57□□□□□ -1.52
SF3B6-202ENST00000478050 PFKFB3Q16875 520 aaPredicted RBP5.57□□□□□ -1.52
SF3B6-202ENST00000478050 SPECC1Q5M775 1068 aa5.57□□□□□ -1.52
SF3B6-202ENST00000478050 TPTE2Q6XPS3 522 aa5.57□□□□□ -1.52
SF3B6-202ENST00000478050 NBPF5PQ86XG9 351 aaPredicted RBP5.57□□□□□ -1.52
SF3B6-202ENST00000478050 CERS3Q8IU89 383 aa5.57□□□□□ -1.52
SF3B6-202ENST00000478050 NPAS4Q8IUM7 802 aa5.57□□□□□ -1.52
SF3B6-202ENST00000478050 AMOTL1Q8IY63 956 aa5.57□□□□□ -1.52
SF3B6-202ENST00000478050 KLHL23Q8NBE8 558 aa5.57□□□□□ -1.52
SF3B6-202ENST00000478050 ZNF397Q8NF99 534 aaPredicted RBP5.57□□□□□ -1.52
SF3B6-202ENST00000478050 WDR66Q8TBY9 1149 aa5.57□□□□□ -1.52
SF3B6-202ENST00000478050 ZNF384Q8TF68 577 aa5.57□□□□□ -1.52
SF3B6-202ENST00000478050 GTF3C2Q8WUA4 911 aaPredicted RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms