RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 KCNJ15Q99712 375 aa5.66□□□□□ -1.5
NCKAP1-204ENST00000477988 SLC39A2Q9NP94 309 aa5.66□□□□□ -1.5
NCKAP1-204ENST00000477988 PRKAG3Q9UGI9 489 aa5.66□□□□□ -1.5
NCKAP1-204ENST00000477988 FAM47E-STBD1D6RA91 191 aa5.65□□□□□ -1.5
NCKAP1-204ENST00000477988 GPR85P60893 370 aa5.65□□□□□ -1.5
NCKAP1-204ENST00000477988 ZC3H6P61129 1189 aaKnown RBP5.65□□□□□ -1.5
NCKAP1-204ENST00000477988 HHEXQ03014 270 aa5.65□□□□□ -1.5
NCKAP1-204ENST00000477988 NOLC1Q14978 699 aaKnown RBP eCLIP5.65□□□□□ -1.5
NCKAP1-204ENST00000477988 WDR72Q3MJ13 1102 aa5.65□□□□□ -1.5
NCKAP1-204ENST00000477988 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.65□□□□□ -1.5
NCKAP1-204ENST00000477988 USP30Q70CQ3 517 aa5.65□□□□□ -1.5
NCKAP1-204ENST00000477988 ADGRE4PQ86SQ3 457 aa5.65□□□□□ -1.5
NCKAP1-204ENST00000477988 GLCCI1Q86VQ1 547 aa5.65□□□□□ -1.5
NCKAP1-204ENST00000477988 IFNL3Q8IZI9 196 aa5.65□□□□□ -1.5
NCKAP1-204ENST00000477988 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.65□□□□□ -1.5
NCKAP1-204ENST00000477988 CFHR4Q92496 578 aa5.65□□□□□ -1.5
NCKAP1-204ENST00000477988 TTPALQ9BTX7 342 aa5.65□□□□□ -1.5
NCKAP1-204ENST00000477988 ACBD3Q9H3P7 528 aa5.65□□□□□ -1.5
NCKAP1-204ENST00000477988 TLR9Q9NR96 1032 aa5.65□□□□□ -1.5
NCKAP1-204ENST00000477988 PLA2G3Q9NZ20 509 aa5.65□□□□□ -1.5
NCKAP1-204ENST00000477988 HMGCRP04035 888 aa5.64□□□□□ -1.51
NCKAP1-204ENST00000477988 SOD2P04179 222 aa5.64□□□□□ -1.51
NCKAP1-204ENST00000477988 SSBP05455 408 aaKnown RBP eCLIP5.64□□□□□ -1.51
NCKAP1-204ENST00000477988 MSX2P35548 267 aaPredicted RBP5.64□□□□□ -1.51
NCKAP1-204ENST00000477988 HSP90AA2PQ14568 343 aaPredicted RBP5.64□□□□□ -1.51
NCKAP1-204ENST00000477988 NLGN4XQ8N0W4 816 aa5.64□□□□□ -1.51
NCKAP1-204ENST00000477988 THEMISQ8N1K5 641 aaPredicted RBP5.64□□□□□ -1.51
NCKAP1-204ENST00000477988 SGSM3Q96HU1 749 aa5.64□□□□□ -1.51
NCKAP1-204ENST00000477988 PARPBPQ9NWS1 579 aa5.64□□□□□ -1.51
NCKAP1-204ENST00000477988 GIT1Q9Y2X7 761 aa5.64□□□□□ -1.51
NCKAP1-204ENST00000477988 MRVI1Q9Y6F6 885 aa5.64□□□□□ -1.51
NCKAP1-204ENST00000477988 KRTAP23-1A1A580 65 aa5.63□□□□□ -1.51
NCKAP1-204ENST00000477988 PMS2P1A4D2B8 440 aa5.63□□□□□ -1.51
NCKAP1-204ENST00000477988 CYP27B1O15528 508 aa5.63□□□□□ -1.51
NCKAP1-204ENST00000477988 EIF4HQ15056 248 aaKnown RBP5.63□□□□□ -1.51
NCKAP1-204ENST00000477988 TBR1Q16650 682 aa5.63□□□□□ -1.51
NCKAP1-204ENST00000477988 TMCO4Q5TGY1 634 aa5.63□□□□□ -1.51
NCKAP1-204ENST00000477988 BTBD8Q5XKL5 378 aa5.63□□□□□ -1.51
NCKAP1-204ENST00000477988 STYK1Q6J9G0 422 aa5.63□□□□□ -1.51
NCKAP1-204ENST00000477988 VPS37DQ86XT2 251 aa5.63□□□□□ -1.51
NCKAP1-204ENST00000477988 TMPRSS6Q8IU80 811 aa5.63□□□□□ -1.51
NCKAP1-204ENST00000477988 ARHGAP28Q9P2N2 729 aa5.63□□□□□ -1.51
NCKAP1-204ENST00000477988 GJB6O95452 261 aa5.62□□□□□ -1.51
NCKAP1-204ENST00000477988 FGFR1P11362 822 aa5.62□□□□□ -1.51
NCKAP1-204ENST00000477988 GRM7Q14831 915 aa5.62□□□□□ -1.51
NCKAP1-204ENST00000477988 STILQ15468 1287 aa5.62□□□□□ -1.51
NCKAP1-204ENST00000477988 KCNT2Q6UVM3 1135 aa5.62□□□□□ -1.51
NCKAP1-204ENST00000477988 DPH6Q7L8W6 267 aa5.62□□□□□ -1.51
NCKAP1-204ENST00000477988 SGMS1Q86VZ5 419 aa5.62□□□□□ -1.51
NCKAP1-204ENST00000477988 CCSER2Q9H7U1 834 aa5.62□□□□□ -1.51
NCKAP1-204ENST00000477988 PTPN1P18031 435 aaKnown RBP5.61□□□□□ -1.51
NCKAP1-204ENST00000477988 MRPS21P82921 87 aaKnown RBP5.61□□□□□ -1.51
NCKAP1-204ENST00000477988 TRIM68Q6AZZ1 485 aa5.61□□□□□ -1.51
NCKAP1-204ENST00000477988 RPUSD2Q8IZ73 545 aaKnown RBP5.61□□□□□ -1.51
NCKAP1-204ENST00000477988 SH3RF2Q8TEC5 729 aa5.61□□□□□ -1.51
NCKAP1-204ENST00000477988 WNK4Q96J92 1243 aa5.61□□□□□ -1.51
NCKAP1-204ENST00000477988 ALG1Q9BT22 464 aa5.61□□□□□ -1.51
NCKAP1-204ENST00000477988 AARSD1Q9BTE6 412 aaKnown RBP5.61□□□□□ -1.51
NCKAP1-204ENST00000477988 CD244Q9BZW8 370 aa5.61□□□□□ -1.51
NCKAP1-204ENST00000477988 OR10A2Q9H208 303 aa5.61□□□□□ -1.51
NCKAP1-204ENST00000477988 CAPN10Q9HC96 672 aa5.61□□□□□ -1.51
NCKAP1-204ENST00000477988 SLC2A4RGQ9NR83 387 aa5.61□□□□□ -1.51
NCKAP1-204ENST00000477988 GALNT8Q9NY28 637 aa5.61□□□□□ -1.51
NCKAP1-204ENST00000477988 IQCA1LA6NCM1 817 aa5.6□□□□□ -1.51
NCKAP1-204ENST00000477988 PTGS1P23219 599 aa5.6□□□□□ -1.51
NCKAP1-204ENST00000477988 GJA4P35212 333 aa5.6□□□□□ -1.51
NCKAP1-204ENST00000477988 KCNQ1P51787 676 aa5.6□□□□□ -1.51
NCKAP1-204ENST00000477988 IL13RA1P78552 427 aa5.6□□□□□ -1.51
NCKAP1-204ENST00000477988 NTRK3Q16288 839 aa5.6□□□□□ -1.51
NCKAP1-204ENST00000477988 LARP4Q71RC2 724 aaKnown RBP eCLIP5.6□□□□□ -1.51
NCKAP1-204ENST00000477988 GPR135Q8IZ08 494 aa5.6□□□□□ -1.51
NCKAP1-204ENST00000477988 NTN5Q8WTR8 489 aaPredicted RBP5.6□□□□□ -1.51
NCKAP1-204ENST00000477988 MPHOSPH9Q99550 1183 aa5.6□□□□□ -1.51
NCKAP1-204ENST00000477988 KIAA1683Q9H0B3 1180 aa5.6□□□□□ -1.51
NCKAP1-204ENST00000477988 IPPKQ9H8X2 491 aa5.6□□□□□ -1.51
NCKAP1-204ENST00000477988 INCENPQ9NQS7 918 aa5.6□□□□□ -1.51
NCKAP1-204ENST00000477988 SRPK3Q9UPE1 567 aa5.6□□□□□ -1.51
NCKAP1-204ENST00000477988 REXO2Q9Y3B8 237 aaKnown RBP5.6□□□□□ -1.51
NCKAP1-204ENST00000477988 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.59□□□□□ -1.51
NCKAP1-204ENST00000477988 TCRBV5S4A2TA0A5A2 114 aa5.59□□□□□ -1.51
NCKAP1-204ENST00000477988 TMEM191CA6NGB0 347 aa5.59□□□□□ -1.51
NCKAP1-204ENST00000477988 FAM90A27PA6NNH2 459 aa5.59□□□□□ -1.51
NCKAP1-204ENST00000477988 ETFBP38117 255 aa5.59□□□□□ -1.51
NCKAP1-204ENST00000477988 MEOX1P50221 254 aa5.59□□□□□ -1.51
NCKAP1-204ENST00000477988 PCOLCEQ15113 449 aa5.59□□□□□ -1.51
NCKAP1-204ENST00000477988 GPR19Q15760 415 aa5.59□□□□□ -1.51
NCKAP1-204ENST00000477988 D2HGDHQ8N465 521 aa5.59□□□□□ -1.51
NCKAP1-204ENST00000477988 ZNF764Q96H86 408 aaPredicted RBP5.59□□□□□ -1.51
NCKAP1-204ENST00000477988 BTBD2Q9BX70 525 aa5.59□□□□□ -1.51
NCKAP1-204ENST00000477988 RIC8BQ9NVN3 520 aa5.59□□□□□ -1.51
NCKAP1-204ENST00000477988 CAPN14A8MX76 684 aa5.58□□□□□ -1.52
NCKAP1-204ENST00000477988 WNT9AO14904 365 aa5.58□□□□□ -1.52
NCKAP1-204ENST00000477988 PRODHO43272 600 aa5.58□□□□□ -1.52
NCKAP1-204ENST00000477988 PABPC1P11940 636 aaKnown RBP5.58□□□□□ -1.52
NCKAP1-204ENST00000477988 PROZP22891 400 aa5.58□□□□□ -1.52
NCKAP1-204ENST00000477988 LAIR1Q6GTX8 287 aa5.58□□□□□ -1.52
NCKAP1-204ENST00000477988 PRIMA1Q86XR5 153 aa5.58□□□□□ -1.52
NCKAP1-204ENST00000477988 OSBP2Q969R2 916 aa5.58□□□□□ -1.52
NCKAP1-204ENST00000477988 A0A0G2JNJ9 132 aa5.57□□□□□ -1.52
NCKAP1-204ENST00000477988 SLC26A4O43511 780 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms