RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 PPFIA3O75145 1194 aa23.29■■□□□ 1.32
PDLIM1-202ENST00000477757 TROAPQ12815 778 aa23.29■■□□□ 1.32
PDLIM1-202ENST00000477757 RIF1Q5UIP0 2472 aaKnown RBP23.29■■□□□ 1.32
PDLIM1-202ENST00000477757 MICAL1Q8TDZ2 1067 aa23.29■■□□□ 1.32
PDLIM1-202ENST00000477757 CUL5Q93034 780 aa23.29■■□□□ 1.32
PDLIM1-202ENST00000477757 PTPRZ1P23471 2315 aaPredicted RBP23.28■■□□□ 1.32
PDLIM1-202ENST00000477757 MEIS2O14770 477 aa23.28■■□□□ 1.32
PDLIM1-202ENST00000477757 PDGFBP01127 241 aaPredicted RBP23.28■■□□□ 1.32
PDLIM1-202ENST00000477757 SRGAP2BP0DMP2 458 aa23.28■■□□□ 1.32
PDLIM1-202ENST00000477757 INSRRP14616 1297 aa23.28■■□□□ 1.32
PDLIM1-202ENST00000477757 SARSP49591 514 aaKnown RBP23.28■■□□□ 1.32
PDLIM1-202ENST00000477757 KCNC3Q14003 757 aa23.28■■□□□ 1.32
PDLIM1-202ENST00000477757 DIEXFQ68CQ4 756 aaKnown RBP23.28■■□□□ 1.32
PDLIM1-202ENST00000477757 PDE12Q6L8Q7 609 aaKnown RBP23.28■■□□□ 1.32
PDLIM1-202ENST00000477757 TMEM184AQ6ZMB5 413 aa23.28■■□□□ 1.32
PDLIM1-202ENST00000477757 RIPOR3Q96MK2 946 aa23.28■■□□□ 1.32
PDLIM1-202ENST00000477757 TMX1Q9H3N1 280 aa23.28■■□□□ 1.32
PDLIM1-202ENST00000477757 AAASQ9NRG9 546 aa23.28■■□□□ 1.32
PDLIM1-202ENST00000477757 KDM3AQ9Y4C1 1321 aa23.28■■□□□ 1.32
PDLIM1-202ENST00000477757 FSCN2O14926 492 aa23.27■■□□□ 1.32
PDLIM1-202ENST00000477757 FGF18O76093 207 aa23.27■■□□□ 1.32
PDLIM1-202ENST00000477757 ITGB5P18084 799 aa23.27■■□□□ 1.32
PDLIM1-202ENST00000477757 TMEM62Q0P6H9 643 aa23.27■■□□□ 1.32
PDLIM1-202ENST00000477757 ASCL5Q7RTU5 278 aa23.27■■□□□ 1.32
PDLIM1-202ENST00000477757 CELF4Q9BZC1 486 aaKnown RBP23.27■■□□□ 1.32
PDLIM1-202ENST00000477757 S1PR5Q9H228 398 aa23.27■■□□□ 1.32
PDLIM1-202ENST00000477757 OSBPL3Q9H4L5 887 aa23.27■■□□□ 1.32
PDLIM1-202ENST00000477757 SENP2Q9HC62 589 aa23.27■■□□□ 1.32
PDLIM1-202ENST00000477757 DCHS1Q96JQ0 3298 aa23.27■■□□□ 1.31
PDLIM1-202ENST00000477757 FNDC1Q4ZHG4 1894 aaPredicted RBP23.26■■□□□ 1.31
PDLIM1-202ENST00000477757 LOXHD1Q8IVV2 1947 aa23.26■■□□□ 1.31
PDLIM1-202ENST00000477757 FAM43BQ6ZT52 329 aaPredicted RBP23.26■■□□□ 1.31
PDLIM1-202ENST00000477757 ZBTB33Q86T24 672 aa23.26■■□□□ 1.31
PDLIM1-202ENST00000477757 RASGRP4Q8TDF6 673 aa23.26■■□□□ 1.31
PDLIM1-202ENST00000477757 PIBF1Q8WXW3 757 aa23.26■■□□□ 1.31
PDLIM1-202ENST00000477757 PCDHA2Q9Y5H9 948 aa23.26■■□□□ 1.31
PDLIM1-202ENST00000477757 FAM186AA6NE01 2351 aa23.26■■□□□ 1.31
PDLIM1-202ENST00000477757 PRR23AA6NEV1 266 aa23.25■■□□□ 1.31
PDLIM1-202ENST00000477757 IFIT3O14879 490 aaKnown RBP23.25■■□□□ 1.31
PDLIM1-202ENST00000477757 ERVFC1P60507 584 aa23.25■■□□□ 1.31
PDLIM1-202ENST00000477757 TRDNQ13061 729 aa23.25■■□□□ 1.31
PDLIM1-202ENST00000477757 SPOUT1Q5T280 376 aaKnown RBP23.25■■□□□ 1.31
PDLIM1-202ENST00000477757 ANKRD54Q6NXT1 300 aa23.25■■□□□ 1.31
PDLIM1-202ENST00000477757 PCYT2Q99447 389 aa23.25■■□□□ 1.31
PDLIM1-202ENST00000477757 CACNA1AO00555 2505 aa23.25■■□□□ 1.31
PDLIM1-202ENST00000477757 GVINP1Q7Z2Y8 2422 aa23.24■■□□□ 1.31
PDLIM1-202ENST00000477757 ERICH2A1L162 156 aa23.24■■□□□ 1.31
PDLIM1-202ENST00000477757 NBL1P41271 181 aa23.24■■□□□ 1.31
PDLIM1-202ENST00000477757 TECP42680 631 aa23.24■■□□□ 1.31
PDLIM1-202ENST00000477757 MTMR1Q13613 665 aa23.24■■□□□ 1.31
PDLIM1-202ENST00000477757 TMEM266Q2M3C6 531 aa23.24■■□□□ 1.31
PDLIM1-202ENST00000477757 SYCE2Q6PIF2 218 aa23.24■■□□□ 1.31
PDLIM1-202ENST00000477757 PLEKHM2Q8IWE5 1019 aa23.24■■□□□ 1.31
PDLIM1-202ENST00000477757 THNSL1Q8IYQ7 743 aa23.24■■□□□ 1.31
PDLIM1-202ENST00000477757 COLGALT1Q8NBJ5 622 aa23.24■■□□□ 1.31
PDLIM1-202ENST00000477757 KREMEN2Q8NCW0 462 aa23.24■■□□□ 1.31
PDLIM1-202ENST00000477757 SPZ1Q9BXG8 430 aa23.24■■□□□ 1.31
PDLIM1-202ENST00000477757 IL25Q9H293 177 aa23.24■■□□□ 1.31
PDLIM1-202ENST00000477757 PKD2L1Q9P0L9 805 aa23.24■■□□□ 1.31
PDLIM1-202ENST00000477757 TRPC6Q9Y210 931 aa23.24■■□□□ 1.31
PDLIM1-202ENST00000477757 LZTS1Q9Y250 596 aa23.24■■□□□ 1.31
PDLIM1-202ENST00000477757 PCDHB7Q9Y5E2 793 aa23.24■■□□□ 1.31
PDLIM1-202ENST00000477757 UBIAD1Q9Y5Z9 338 aa23.24■■□□□ 1.31
PDLIM1-202ENST00000477757 TBKBP1A7MCY6 615 aa23.23■■□□□ 1.31
PDLIM1-202ENST00000477757 MGEA5O60502 916 aa23.23■■□□□ 1.31
PDLIM1-202ENST00000477757 KRT76Q01546 638 aa23.23■■□□□ 1.31
PDLIM1-202ENST00000477757 MTMR3Q13615 1198 aa23.23■■□□□ 1.31
PDLIM1-202ENST00000477757 WTAPQ15007 396 aa23.23■■□□□ 1.31
PDLIM1-202ENST00000477757 UBALD2Q8IYN6 164 aa23.23■■□□□ 1.31
PDLIM1-202ENST00000477757 TRAPPC12Q8WVT3 735 aa23.23■■□□□ 1.31
PDLIM1-202ENST00000477757 TNPO1Q92973 898 aaKnown RBP23.23■■□□□ 1.31
PDLIM1-202ENST00000477757 RRP36Q96EU6 259 aaKnown RBP23.23■■□□□ 1.31
PDLIM1-202ENST00000477757 ERVK-5Q9HDB9 667 aa23.23■■□□□ 1.31
PDLIM1-202ENST00000477757 JPH1Q9HDC5 661 aaPredicted RBP23.23■■□□□ 1.31
PDLIM1-202ENST00000477757 RNF216Q9NWF9 866 aaPredicted RBP23.23■■□□□ 1.31
PDLIM1-202ENST00000477757 TMEM260Q9NX78 707 aa23.23■■□□□ 1.31
PDLIM1-202ENST00000477757 HCSTQ9UBK5 93 aa23.23■■□□□ 1.31
PDLIM1-202ENST00000477757 WDR87Q6ZQQ6 2873 aa23.23■■□□□ 1.31
PDLIM1-202ENST00000477757 SMIM35A0A1B0GVV1 85 aa23.22■■□□□ 1.31
PDLIM1-202ENST00000477757 HOXB8P17481 243 aaPredicted RBP23.22■■□□□ 1.31
PDLIM1-202ENST00000477757 IBSPP21815 317 aaPredicted RBP23.22■■□□□ 1.31
PDLIM1-202ENST00000477757 SP100P23497 879 aaPredicted RBP23.22■■□□□ 1.31
PDLIM1-202ENST00000477757 NME8Q8N427 588 aa23.22■■□□□ 1.31
PDLIM1-202ENST00000477757 AZI2Q9H6S1 392 aa23.22■■□□□ 1.31
PDLIM1-202ENST00000477757 C1orf112Q9NSG2 853 aa23.22■■□□□ 1.31
PDLIM1-202ENST00000477757 SORCS3Q9UPU3 1222 aa23.22■■□□□ 1.31
PDLIM1-202ENST00000477757 NR2E1Q9Y466 385 aa23.22■■□□□ 1.31
PDLIM1-202ENST00000477757 LAG3P18627 525 aa23.21■■□□□ 1.31
PDLIM1-202ENST00000477757 NFX1Q12986 1120 aaKnown RBP23.21■■□□□ 1.31
PDLIM1-202ENST00000477757 SART3Q15020 963 aaKnown RBP23.21■■□□□ 1.31
PDLIM1-202ENST00000477757 PLCB4Q15147 1175 aa23.21■■□□□ 1.31
PDLIM1-202ENST00000477757 PLPP4Q5VZY2 271 aa23.21■■□□□ 1.31
PDLIM1-202ENST00000477757 CATIPQ7Z7H3 387 aa23.21■■□□□ 1.31
PDLIM1-202ENST00000477757 SMC5Q8IY18 1101 aa23.21■■□□□ 1.31
PDLIM1-202ENST00000477757 TMEM105Q8N8V8 129 aa23.21■■□□□ 1.31
PDLIM1-202ENST00000477757 RGS18Q9NS28 235 aa23.21■■□□□ 1.31
PDLIM1-202ENST00000477757 TYW1Q9NV66 732 aaKnown RBP23.21■■□□□ 1.31
PDLIM1-202ENST00000477757 SEC63Q9UGP8 760 aaKnown RBP23.21■■□□□ 1.31
PDLIM1-202ENST00000477757 C9IYK1 514 aa23.2■■□□□ 1.3
PDLIM1-202ENST00000477757 MAFGO15525 162 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms