RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 IL25Q9H293 177 aa7.66□□□□□ -1.18
RTFDC1-206ENST00000477485 AGO3Q9H9G7 860 aaKnown RBP7.66□□□□□ -1.18
RTFDC1-206ENST00000477485 RC3H2Q9HBD1 1191 aaKnown RBP7.66□□□□□ -1.18
RTFDC1-206ENST00000477485 JPH1Q9HDC5 661 aaPredicted RBP7.66□□□□□ -1.18
RTFDC1-206ENST00000477485 TSHZ2Q9NRE2 1034 aa7.66□□□□□ -1.18
RTFDC1-206ENST00000477485 USP15Q9Y4E8 981 aaPredicted RBP7.66□□□□□ -1.18
RTFDC1-206ENST00000477485 PCDHB7Q9Y5E2 793 aa7.66□□□□□ -1.18
RTFDC1-206ENST00000477485 PCDHB12Q9Y5F1 795 aa7.66□□□□□ -1.18
RTFDC1-206ENST00000477485 GSTTP1A0A1W2PQM5 241 aa7.65□□□□□ -1.18
RTFDC1-206ENST00000477485 hCG_1642624A0A1W2PR95 340 aa7.65□□□□□ -1.18
RTFDC1-206ENST00000477485 CCDC69A6NI79 296 aa7.65□□□□□ -1.18
RTFDC1-206ENST00000477485 RRN3P2A6NIE6 340 aa7.65□□□□□ -1.18
RTFDC1-206ENST00000477485 TBKBP1A7MCY6 615 aa7.65□□□□□ -1.18
RTFDC1-206ENST00000477485 DDX39AO00148 427 aaKnown RBP7.65□□□□□ -1.18
RTFDC1-206ENST00000477485 MEIS2O14770 477 aa7.65□□□□□ -1.18
RTFDC1-206ENST00000477485 TRIOO75962 3097 aa7.65□□□□□ -1.18
RTFDC1-206ENST00000477485 PLEKHA8P1O95397 391 aa7.65□□□□□ -1.18
RTFDC1-206ENST00000477485 SRGAP2BP0DMP2 458 aa7.65□□□□□ -1.18
RTFDC1-206ENST00000477485 KCNA2P16389 499 aa7.65□□□□□ -1.18
RTFDC1-206ENST00000477485 RXRAP19793 462 aa7.65□□□□□ -1.18
RTFDC1-206ENST00000477485 RBM10P98175 930 aaKnown RBP7.65□□□□□ -1.18
RTFDC1-206ENST00000477485 KRT76Q01546 638 aa7.65□□□□□ -1.18
RTFDC1-206ENST00000477485 NUCB1Q02818 461 aa7.65□□□□□ -1.18
RTFDC1-206ENST00000477485 TROAPQ12815 778 aa7.65□□□□□ -1.18
RTFDC1-206ENST00000477485 CAMK1Q14012 370 aa7.65□□□□□ -1.18
RTFDC1-206ENST00000477485 NAALADL2Q58DX5 795 aa7.65□□□□□ -1.18
RTFDC1-206ENST00000477485 MARCH8Q5T0T0 291 aa7.65□□□□□ -1.18
RTFDC1-206ENST00000477485 PLPP4Q5VZY2 271 aa7.65□□□□□ -1.18
RTFDC1-206ENST00000477485 XRRA1Q6P2D8 792 aa7.65□□□□□ -1.18
RTFDC1-206ENST00000477485 TRMT1LQ7Z2T5 733 aaKnown RBP7.65□□□□□ -1.18
RTFDC1-206ENST00000477485 SMC5Q8IY18 1101 aa7.65□□□□□ -1.18
RTFDC1-206ENST00000477485 ZNF654Q8IZM8 581 aa7.65□□□□□ -1.18
RTFDC1-206ENST00000477485 CCDC82Q8N4S0 544 aa7.65□□□□□ -1.18
RTFDC1-206ENST00000477485 FBXL6Q8N531 539 aa7.65□□□□□ -1.18
RTFDC1-206ENST00000477485 SMRP1Q8NCR6 262 aa7.65□□□□□ -1.18
RTFDC1-206ENST00000477485 SPPL3Q8TCT6 385 aa7.65□□□□□ -1.18
RTFDC1-206ENST00000477485 ATOH1Q92858 354 aaPredicted RBP7.65□□□□□ -1.18
RTFDC1-206ENST00000477485 TNPO1Q92973 898 aaKnown RBP7.65□□□□□ -1.18
RTFDC1-206ENST00000477485 MSLNLQ96KJ4 702 aa7.65□□□□□ -1.18
RTFDC1-206ENST00000477485 NEK1Q96PY6 1258 aa7.65□□□□□ -1.18
RTFDC1-206ENST00000477485 SDF4Q9BRK5 362 aa7.65□□□□□ -1.18
RTFDC1-206ENST00000477485 OSBPL3Q9H4L5 887 aa7.65□□□□□ -1.18
RTFDC1-206ENST00000477485 PSTPIP2Q9H939 334 aa7.65□□□□□ -1.18
RTFDC1-206ENST00000477485 ENTPD7Q9NQZ7 604 aa7.65□□□□□ -1.18
RTFDC1-206ENST00000477485 AAASQ9NRG9 546 aa7.65□□□□□ -1.18
RTFDC1-206ENST00000477485 CLEC1BQ9P126 229 aa7.65□□□□□ -1.18
RTFDC1-206ENST00000477485 SLC9A2Q9UBY0 812 aa7.65□□□□□ -1.18
RTFDC1-206ENST00000477485 PADI3Q9ULW8 664 aa7.65□□□□□ -1.18
RTFDC1-206ENST00000477485 MYO10Q9HD67 2058 aa7.64□□□□□ -1.19
RTFDC1-206ENST00000477485 PLXNA3P51805 1871 aa7.64□□□□□ -1.19
RTFDC1-206ENST00000477485 MBLAC1A4D2B0 266 aaPredicted RBP7.64□□□□□ -1.19
RTFDC1-206ENST00000477485 BACH1O14867 736 aa7.64□□□□□ -1.19
RTFDC1-206ENST00000477485 GFRA3O60609 400 aa7.64□□□□□ -1.19
RTFDC1-206ENST00000477485 DDAH1O94760 285 aa7.64□□□□□ -1.19
RTFDC1-206ENST00000477485 EYA4O95677 639 aa7.64□□□□□ -1.19
RTFDC1-206ENST00000477485 GLP2RO95838 553 aa7.64□□□□□ -1.19
RTFDC1-206ENST00000477485 IGHDP01880 384 aa7.64□□□□□ -1.19
RTFDC1-206ENST00000477485 RPLP2P05387 115 aaKnown RBP7.64□□□□□ -1.19
RTFDC1-206ENST00000477485 ITGB5P18084 799 aa7.64□□□□□ -1.19
RTFDC1-206ENST00000477485 TECP42680 631 aa7.64□□□□□ -1.19
RTFDC1-206ENST00000477485 VCPP55072 806 aaKnown RBP7.64□□□□□ -1.19
RTFDC1-206ENST00000477485 PTH1RQ03431 593 aa7.64□□□□□ -1.19
RTFDC1-206ENST00000477485 SIGLEC14Q08ET2 396 aa7.64□□□□□ -1.19
RTFDC1-206ENST00000477485 APOBRQ0VD83 1088 aa7.64□□□□□ -1.19
RTFDC1-206ENST00000477485 COASYQ13057 564 aa7.64□□□□□ -1.19
RTFDC1-206ENST00000477485 PLCB4Q15147 1175 aa7.64□□□□□ -1.19
RTFDC1-206ENST00000477485 PKN1Q16512 942 aa7.64□□□□□ -1.19
RTFDC1-206ENST00000477485 HEATR3Q7Z4Q2 680 aa7.64□□□□□ -1.19
RTFDC1-206ENST00000477485 RTN4RL1Q86UN2 441 aaPredicted RBP7.64□□□□□ -1.19
RTFDC1-206ENST00000477485 PGBD1Q96JS3 809 aa7.64□□□□□ -1.19
RTFDC1-206ENST00000477485 SNX27Q96L92 541 aa7.64□□□□□ -1.19
RTFDC1-206ENST00000477485 PRRX2Q99811 253 aa7.64□□□□□ -1.19
RTFDC1-206ENST00000477485 PHF7Q9BWX1 381 aaPredicted RBP7.64□□□□□ -1.19
RTFDC1-206ENST00000477485 SPZ1Q9BXG8 430 aa7.64□□□□□ -1.19
RTFDC1-206ENST00000477485 CELF4Q9BZC1 486 aaKnown RBP7.64□□□□□ -1.19
RTFDC1-206ENST00000477485 TLR9Q9NR96 1032 aa7.64□□□□□ -1.19
RTFDC1-206ENST00000477485 TMEM260Q9NX78 707 aa7.64□□□□□ -1.19
RTFDC1-206ENST00000477485 TCEAL9Q9UHQ7 104 aa7.64□□□□□ -1.19
RTFDC1-206ENST00000477485 PCDHA6Q9UN73 950 aa7.64□□□□□ -1.19
RTFDC1-206ENST00000477485 PCDHA8Q9Y5H6 950 aa7.64□□□□□ -1.19
RTFDC1-206ENST00000477485 TAF6LQ9Y6J9 622 aa7.64□□□□□ -1.19
RTFDC1-206ENST00000477485 IGSF9BQ9UPX0 1349 aa7.63□□□□□ -1.19
RTFDC1-206ENST00000477485 LOC730098B7Z3J9 87 aa7.63□□□□□ -1.19
RTFDC1-206ENST00000477485 PIK3CDO00329 1044 aa7.63□□□□□ -1.19
RTFDC1-206ENST00000477485 PRC1O43663 620 aa7.63□□□□□ -1.19
RTFDC1-206ENST00000477485 ST18O60284 1047 aa7.63□□□□□ -1.19
RTFDC1-206ENST00000477485 RPS6KA5O75582 802 aa7.63□□□□□ -1.19
RTFDC1-206ENST00000477485 FGF18O76093 207 aa7.63□□□□□ -1.19
RTFDC1-206ENST00000477485 ZNF76P36508 570 aa7.63□□□□□ -1.19
RTFDC1-206ENST00000477485 SARSP49591 514 aaKnown RBP7.63□□□□□ -1.19
RTFDC1-206ENST00000477485 GNAQP50148 359 aa7.63□□□□□ -1.19
RTFDC1-206ENST00000477485 STAT5BP51692 787 aa7.63□□□□□ -1.19
RTFDC1-206ENST00000477485 ANTXR2P58335 489 aa7.63□□□□□ -1.19
RTFDC1-206ENST00000477485 ACTR2P61160 394 aa7.63□□□□□ -1.19
RTFDC1-206ENST00000477485 TCF15Q12870 199 aa7.63□□□□□ -1.19
RTFDC1-206ENST00000477485 FAM102BQ5T8I3 360 aa7.63□□□□□ -1.19
RTFDC1-206ENST00000477485 TTC22Q5TAA0 569 aa7.63□□□□□ -1.19
RTFDC1-206ENST00000477485 MTHFD1LQ6UB35 978 aa7.63□□□□□ -1.19
RTFDC1-206ENST00000477485 BMP8AQ7Z5Y6 402 aa7.63□□□□□ -1.19
RTFDC1-206ENST00000477485 CKAP2LQ8IYA6 745 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms