RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 PDIA5Q14554 519 aa17.82■□□□□ 0.44
COPS3-207ENST00000477299 TMEM266Q2M3C6 531 aa17.82■□□□□ 0.44
COPS3-207ENST00000477299 MARCH8Q5T0T0 291 aa17.82■□□□□ 0.44
COPS3-207ENST00000477299 ARL6IP4Q66PJ3 421 aaKnown RBP17.82■□□□□ 0.44
COPS3-207ENST00000477299 PLA2G4FQ68DD2 849 aa17.82■□□□□ 0.44
COPS3-207ENST00000477299 NFRKBQ6P4R8 1299 aa17.82■□□□□ 0.44
COPS3-207ENST00000477299 POTEBQ6S5H4 581 aa17.82■□□□□ 0.44
COPS3-207ENST00000477299 FAM126BQ8IXS8 530 aa17.82■□□□□ 0.44
COPS3-207ENST00000477299 CKAP2LQ8IYA6 745 aa17.82■□□□□ 0.44
COPS3-207ENST00000477299 C7orf31Q8N865 590 aa17.82■□□□□ 0.44
COPS3-207ENST00000477299 ATP8B4Q8TF62 1192 aa17.82■□□□□ 0.44
COPS3-207ENST00000477299 LMBR1Q8WVP7 490 aa17.82■□□□□ 0.44
COPS3-207ENST00000477299 PLIN2Q99541 437 aa17.82■□□□□ 0.44
COPS3-207ENST00000477299 KATNAL1Q9BW62 490 aa17.82■□□□□ 0.44
COPS3-207ENST00000477299 CSRNP2Q9H175 543 aa17.82■□□□□ 0.44
COPS3-207ENST00000477299 GTF2IRD1Q9UHL9 959 aa17.82■□□□□ 0.44
COPS3-207ENST00000477299 ZNF215Q9UL58 517 aaPredicted RBP17.82■□□□□ 0.44
COPS3-207ENST00000477299 TRPC6Q9Y210 931 aa17.82■□□□□ 0.44
COPS3-207ENST00000477299 SCN5AQ14524 2016 aa17.81■□□□□ 0.44
COPS3-207ENST00000477299 DDX11L8A8MPP1 907 aa17.81■□□□□ 0.44
COPS3-207ENST00000477299 SPTLC2O15270 562 aa17.81■□□□□ 0.44
COPS3-207ENST00000477299 TREHO43280 583 aa17.81■□□□□ 0.44
COPS3-207ENST00000477299 CD4P01730 458 aa17.81■□□□□ 0.44
COPS3-207ENST00000477299 P4HBP07237 508 aaKnown RBP17.81■□□□□ 0.44
COPS3-207ENST00000477299 CYP2C9P11712 490 aa17.81■□□□□ 0.44
COPS3-207ENST00000477299 NCLP19338 710 aaKnown RBP17.81■□□□□ 0.44
COPS3-207ENST00000477299 QARSP47897 775 aaKnown RBP17.81■□□□□ 0.44
COPS3-207ENST00000477299 PSMC5P62195 406 aa17.81■□□□□ 0.44
COPS3-207ENST00000477299 ADAM17P78536 824 aa17.81■□□□□ 0.44
COPS3-207ENST00000477299 GRIK4Q16099 956 aa17.81■□□□□ 0.44
COPS3-207ENST00000477299 C1orf53Q5VUE5 145 aa17.81■□□□□ 0.44
COPS3-207ENST00000477299 POTEGQ6S5H5 508 aa17.81■□□□□ 0.44
COPS3-207ENST00000477299 ANO5Q75V66 913 aa17.81■□□□□ 0.44
COPS3-207ENST00000477299 LRRC15Q8TF66 581 aa17.81■□□□□ 0.44
COPS3-207ENST00000477299 RCOR1Q9UKL0 485 aa17.81■□□□□ 0.44
COPS3-207ENST00000477299 CEP131Q9UPN4 1083 aa17.81■□□□□ 0.44
COPS3-207ENST00000477299 SRPRBQ9Y5M8 271 aaKnown RBP17.81■□□□□ 0.44
COPS3-207ENST00000477299 OATP04181 439 aa17.8■□□□□ 0.44
COPS3-207ENST00000477299 HOXC8P31273 242 aa17.8■□□□□ 0.44
COPS3-207ENST00000477299 CCT6AP40227 531 aaKnown RBP17.8■□□□□ 0.44
COPS3-207ENST00000477299 NPEPPSP55786 919 aa17.8■□□□□ 0.44
COPS3-207ENST00000477299 MLLT1Q03111 559 aaPredicted RBP17.8■□□□□ 0.44
COPS3-207ENST00000477299 PPFIA1Q13136 1202 aa17.8■□□□□ 0.44
COPS3-207ENST00000477299 PTGISQ16647 500 aa17.8■□□□□ 0.44
COPS3-207ENST00000477299 ANKRD33Q7Z3H0 272 aa17.8■□□□□ 0.44
COPS3-207ENST00000477299 SESTD1Q86VW0 696 aa17.8■□□□□ 0.44
COPS3-207ENST00000477299 C7orf61Q8IZ16 206 aa17.8■□□□□ 0.44
COPS3-207ENST00000477299 PIGOQ8TEQ8 1089 aa17.8■□□□□ 0.44
COPS3-207ENST00000477299 DPF3Q92784 378 aa17.8■□□□□ 0.44
COPS3-207ENST00000477299 EPSTI1Q96J88 318 aa17.8■□□□□ 0.44
COPS3-207ENST00000477299 PNMA5Q96PV4 448 aa17.8■□□□□ 0.44
COPS3-207ENST00000477299 CHMP5Q9NZZ3 219 aa17.8■□□□□ 0.44
COPS3-207ENST00000477299 CIZ1Q9ULV3 898 aaPredicted RBP17.8■□□□□ 0.44
COPS3-207ENST00000477299 UMODL1Q5DID0 1318 aa17.79■□□□□ 0.44
COPS3-207ENST00000477299 C17orf102A2RUQ5 167 aa17.79■□□□□ 0.44
COPS3-207ENST00000477299 TRIM43BA6NCK2 446 aa17.79■□□□□ 0.44
COPS3-207ENST00000477299 BMP15O95972 392 aa17.79■□□□□ 0.44
COPS3-207ENST00000477299 ITGB8P26012 769 aa17.79■□□□□ 0.44
COPS3-207ENST00000477299 ZRSR1Q15695 479 aaKnown RBP17.79■□□□□ 0.44
COPS3-207ENST00000477299 TPRNQ4KMQ1 711 aa17.79■□□□□ 0.44
COPS3-207ENST00000477299 AXDND1Q5T1B0 1012 aaPredicted RBP17.79■□□□□ 0.44
COPS3-207ENST00000477299 RUFY4Q6ZNE9 571 aa17.79■□□□□ 0.44
COPS3-207ENST00000477299 KCNK18Q7Z418 384 aa17.79■□□□□ 0.44
COPS3-207ENST00000477299 SNX29Q8TEQ0 813 aa17.79■□□□□ 0.44
COPS3-207ENST00000477299 LEO1Q8WVC0 666 aaPredicted RBP17.79■□□□□ 0.44
COPS3-207ENST00000477299 BBXQ8WY36 941 aaPredicted RBP17.79■□□□□ 0.44
COPS3-207ENST00000477299 DHX38Q92620 1227 aaKnown RBP17.79■□□□□ 0.44
COPS3-207ENST00000477299 TRIM43Q96BQ3 446 aaPredicted RBP17.79■□□□□ 0.44
COPS3-207ENST00000477299 CEP89Q96ST8 783 aa17.79■□□□□ 0.44
COPS3-207ENST00000477299 POLR3CQ9BUI4 534 aaPredicted RBP17.79■□□□□ 0.44
COPS3-207ENST00000477299 SEPT9Q9UHD8 586 aaPredicted RBP17.79■□□□□ 0.44
COPS3-207ENST00000477299 PCDHA7Q9UN72 937 aa17.79■□□□□ 0.44
COPS3-207ENST00000477299 SIP14410 1827 aa17.78■□□□□ 0.44
COPS3-207ENST00000477299 HBP1O60381 514 aa17.78■□□□□ 0.44
COPS3-207ENST00000477299 YEATS4O95619 227 aa17.78■□□□□ 0.44
COPS3-207ENST00000477299 SYN1P17600 705 aa17.78■□□□□ 0.44
COPS3-207ENST00000477299 RPA1P27694 616 aa17.78■□□□□ 0.44
COPS3-207ENST00000477299 SLC26A2P50443 739 aa17.78■□□□□ 0.44
COPS3-207ENST00000477299 PTPN11Q06124 597 aaPredicted RBP17.78■□□□□ 0.44
COPS3-207ENST00000477299 GRB10Q13322 594 aa17.78■□□□□ 0.44
COPS3-207ENST00000477299 TARBP2Q15633 366 aaKnown RBP17.78■□□□□ 0.44
COPS3-207ENST00000477299 MTERF2Q49AM1 385 aa17.78■□□□□ 0.44
COPS3-207ENST00000477299 XKR3Q5GH77 459 aa17.78■□□□□ 0.44
COPS3-207ENST00000477299 C4orf19Q8IY42 314 aa17.78■□□□□ 0.44
COPS3-207ENST00000477299 KRI1Q8N9T8 703 aaKnown RBP17.78■□□□□ 0.44
COPS3-207ENST00000477299 TNPO1Q92973 898 aaKnown RBP17.78■□□□□ 0.44
COPS3-207ENST00000477299 ATP6V0A1Q93050 837 aa17.78■□□□□ 0.44
COPS3-207ENST00000477299 TOX2Q96NM4 488 aa17.78■□□□□ 0.44
COPS3-207ENST00000477299 PANK2Q9BZ23 570 aa17.78■□□□□ 0.44
COPS3-207ENST00000477299 ZSWIM4Q9H7M6 989 aa17.78■□□□□ 0.44
COPS3-207ENST00000477299 PDLIM7Q9NR12 457 aa17.78■□□□□ 0.44
COPS3-207ENST00000477299 BMP2KQ9NSY1 1161 aaPredicted RBP17.78■□□□□ 0.44
COPS3-207ENST00000477299 KIAA1024Q9UPX6 916 aa17.78■□□□□ 0.44
COPS3-207ENST00000477299 DCDC2CA8MYV0 355 aa17.77■□□□□ 0.44
COPS3-207ENST00000477299 E9PMD0 336 aa17.77■□□□□ 0.44
COPS3-207ENST00000477299 PPP6R2O75170 966 aa17.77■□□□□ 0.44
COPS3-207ENST00000477299 KLRC1P26715 233 aa17.77■□□□□ 0.44
COPS3-207ENST00000477299 YWHABP31946 246 aaKnown RBP17.77■□□□□ 0.44
COPS3-207ENST00000477299 KRT85P78386 507 aa17.77■□□□□ 0.44
COPS3-207ENST00000477299 ATL3Q6DD88 541 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms