RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 ATP4AP20648 1035 aa16.05■□□□□ 0.16
COL4A6-206ENST00000477085 CCNE1P24864 410 aa16.05■□□□□ 0.16
COL4A6-206ENST00000477085 MAPK7Q13164 816 aa16.05■□□□□ 0.16
COL4A6-206ENST00000477085 TAF1CQ15572 869 aaPredicted RBP16.05■□□□□ 0.16
COL4A6-206ENST00000477085 CCDC62Q6P9F0 684 aa16.05■□□□□ 0.16
COL4A6-206ENST00000477085 ARMCX2Q7L311 632 aa16.05■□□□□ 0.16
COL4A6-206ENST00000477085 SFR1Q86XK3 245 aa16.05■□□□□ 0.16
COL4A6-206ENST00000477085 DAW1Q8N136 415 aa16.05■□□□□ 0.16
COL4A6-206ENST00000477085 GUF1Q8N442 669 aaKnown RBP16.05■□□□□ 0.16
COL4A6-206ENST00000477085 SCFD1Q8WVM8 642 aa16.05■□□□□ 0.16
COL4A6-206ENST00000477085 CCDC102AQ96A19 550 aa16.05■□□□□ 0.16
COL4A6-206ENST00000477085 B4DLN1 442 aa16.04■□□□□ 0.16
COL4A6-206ENST00000477085 TOMM70O94826 608 aa16.04■□□□□ 0.16
COL4A6-206ENST00000477085 PSAPP07602 524 aa16.04■□□□□ 0.16
COL4A6-206ENST00000477085 SUPT20HL2P0C7V6 817 aa16.04■□□□□ 0.16
COL4A6-206ENST00000477085 CDC25BP30305 580 aa16.04■□□□□ 0.16
COL4A6-206ENST00000477085 NPEPPSP55786 919 aa16.04■□□□□ 0.16
COL4A6-206ENST00000477085 INHBEP58166 350 aa16.04■□□□□ 0.16
COL4A6-206ENST00000477085 STIM1Q13586 685 aa16.04■□□□□ 0.16
COL4A6-206ENST00000477085 PTPN21Q16825 1174 aa16.04■□□□□ 0.16
COL4A6-206ENST00000477085 PLA2G4FQ68DD2 849 aa16.04■□□□□ 0.16
COL4A6-206ENST00000477085 PADI6Q6TGC4 694 aa16.04■□□□□ 0.16
COL4A6-206ENST00000477085 PLEKHH3Q7Z736 793 aa16.04■□□□□ 0.16
COL4A6-206ENST00000477085 EEF2KMTQ96G04 330 aa16.04■□□□□ 0.16
COL4A6-206ENST00000477085 PCYT2Q99447 389 aa16.04■□□□□ 0.16
COL4A6-206ENST00000477085 GTPBP4Q9BZE4 634 aaKnown RBP16.04■□□□□ 0.16
COL4A6-206ENST00000477085 KATNBL1Q9H079 304 aa16.04■□□□□ 0.16
COL4A6-206ENST00000477085 PLXNB2O15031 1838 aa16.04■□□□□ 0.16
COL4A6-206ENST00000477085 IGKV6D-21A0A0A0MT36 114 aa16.03■□□□□ 0.16
COL4A6-206ENST00000477085 LOC102724159A0A0B4J2E5 919 aa16.03■□□□□ 0.16
COL4A6-206ENST00000477085 ARHGEF35A5YM69 484 aa16.03■□□□□ 0.16
COL4A6-206ENST00000477085 TLR2O60603 784 aa16.03■□□□□ 0.16
COL4A6-206ENST00000477085 GGPS1O95749 300 aa16.03■□□□□ 0.16
COL4A6-206ENST00000477085 SNAI1O95863 264 aaPredicted RBP16.03■□□□□ 0.16
COL4A6-206ENST00000477085 GUCY2CP25092 1073 aa16.03■□□□□ 0.16
COL4A6-206ENST00000477085 MAPK4P31152 587 aa16.03■□□□□ 0.16
COL4A6-206ENST00000477085 HOXD13P35453 343 aa16.03■□□□□ 0.16
COL4A6-206ENST00000477085 TM4SF4P48230 202 aa16.03■□□□□ 0.16
COL4A6-206ENST00000477085 ZNF131P52739 623 aa16.03■□□□□ 0.16
COL4A6-206ENST00000477085 UBASH3AP57075 661 aa16.03■□□□□ 0.16
COL4A6-206ENST00000477085 PWP2Q15269 919 aaKnown RBP16.03■□□□□ 0.16
COL4A6-206ENST00000477085 CYP4F22Q6NT55 531 aa16.03■□□□□ 0.16
COL4A6-206ENST00000477085 TAPT1Q6NXT6 567 aa16.03■□□□□ 0.16
COL4A6-206ENST00000477085 EPM2AIP1Q7L775 607 aaPredicted RBP16.03■□□□□ 0.16
COL4A6-206ENST00000477085 NPLOC4Q8TAT6 608 aa16.03■□□□□ 0.16
COL4A6-206ENST00000477085 COPS5Q92905 334 aa16.03■□□□□ 0.16
COL4A6-206ENST00000477085 HHIPL1Q96JK4 782 aa16.03■□□□□ 0.16
COL4A6-206ENST00000477085 FIZ1Q96SL8 496 aa16.03■□□□□ 0.16
COL4A6-206ENST00000477085 TCEAL9Q9UHQ7 104 aa16.03■□□□□ 0.16
COL4A6-206ENST00000477085 ASB14A6NK59 587 aa16.03■□□□□ 0.16
COL4A6-206ENST00000477085 NKRFO15226 690 aaKnown RBP eCLIP16.03■□□□□ 0.16
COL4A6-206ENST00000477085 SERPINC1P01008 464 aa16.03■□□□□ 0.16
COL4A6-206ENST00000477085 NEDD9Q14511 834 aa16.03■□□□□ 0.16
COL4A6-206ENST00000477085 CCDC144BQ3MJ40 725 aa16.03■□□□□ 0.16
COL4A6-206ENST00000477085 MIS18BP1Q6P0N0 1132 aa16.03■□□□□ 0.16
COL4A6-206ENST00000477085 MAMDC4Q6UXC1 1216 aa16.03■□□□□ 0.16
COL4A6-206ENST00000477085 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.03■□□□□ 0.16
COL4A6-206ENST00000477085 MPHOSPH6Q99547 160 aaKnown RBP16.03■□□□□ 0.16
COL4A6-206ENST00000477085 SRRTQ9BXP5 876 aaKnown RBP16.03■□□□□ 0.16
COL4A6-206ENST00000477085 ANKEF1Q9NU02 776 aa16.03■□□□□ 0.16
COL4A6-206ENST00000477085 KCND2Q9NZV8 630 aa16.03■□□□□ 0.16
COL4A6-206ENST00000477085 MAFBQ9Y5Q3 323 aaPredicted RBP16.03■□□□□ 0.16
COL4A6-206ENST00000477085 IVNS1ABPQ9Y6Y0 642 aa16.03■□□□□ 0.16
COL4A6-206ENST00000477085 HIP1RO75146 1068 aa16.02■□□□□ 0.15
COL4A6-206ENST00000477085 MYBP10242 640 aa16.02■□□□□ 0.15
COL4A6-206ENST00000477085 CDK11BP21127 795 aaKnown RBP16.02■□□□□ 0.15
COL4A6-206ENST00000477085 PPP1R2P41236 205 aa16.02■□□□□ 0.15
COL4A6-206ENST00000477085 GRM1Q13255 1194 aa16.02■□□□□ 0.15
COL4A6-206ENST00000477085 CRHR2Q13324 411 aa16.02■□□□□ 0.15
COL4A6-206ENST00000477085 HSDL1Q3SXM5 330 aa16.02■□□□□ 0.15
COL4A6-206ENST00000477085 ZCWPW2Q504Y3 356 aa16.02■□□□□ 0.15
COL4A6-206ENST00000477085 CELF3Q5SZQ8 465 aaKnown RBP16.02■□□□□ 0.15
COL4A6-206ENST00000477085 MORN1Q5T089 497 aa16.02■□□□□ 0.15
COL4A6-206ENST00000477085 METTL7BQ6UX53 244 aa16.02■□□□□ 0.15
COL4A6-206ENST00000477085 MAEAQ7L5Y9 396 aa16.02■□□□□ 0.15
COL4A6-206ENST00000477085 ZNF467Q7Z7K2 595 aaPredicted RBP16.02■□□□□ 0.15
COL4A6-206ENST00000477085 MYOCDQ8IZQ8 938 aa16.02■□□□□ 0.15
COL4A6-206ENST00000477085 MAML3Q96JK9 1138 aa16.02■□□□□ 0.15
COL4A6-206ENST00000477085 KCTD10Q9H3F6 313 aa16.02■□□□□ 0.15
COL4A6-206ENST00000477085 COL4A3BPQ9Y5P4 624 aa16.02■□□□□ 0.15
COL4A6-206ENST00000477085 IGSF9BQ9UPX0 1349 aa16.02■□□□□ 0.15
COL4A6-206ENST00000477085 LRRC10BA6NIK2 292 aa16.01■□□□□ 0.15
COL4A6-206ENST00000477085 NR1I3Q14994 352 aa16.01■□□□□ 0.15
COL4A6-206ENST00000477085 TPD52L1Q16890 204 aaPredicted RBP16.01■□□□□ 0.15
COL4A6-206ENST00000477085 TCP11X2Q5H9J9 407 aa16.01■□□□□ 0.15
COL4A6-206ENST00000477085 DPP9Q86TI2 863 aa16.01■□□□□ 0.15
COL4A6-206ENST00000477085 NELFCDQ8IXH7 590 aa16.01■□□□□ 0.15
COL4A6-206ENST00000477085 ATP6V0A1Q93050 837 aa16.01■□□□□ 0.15
COL4A6-206ENST00000477085 TRIM47Q96LD4 638 aa16.01■□□□□ 0.15
COL4A6-206ENST00000477085 ZNF830Q96NB3 372 aaPredicted RBP16.01■□□□□ 0.15
COL4A6-206ENST00000477085 SLC15A5A6NIM6 579 aa16■□□□□ 0.15
COL4A6-206ENST00000477085 USO1O60763 962 aaKnown RBP16■□□□□ 0.15
COL4A6-206ENST00000477085 TBCAO75347 108 aaKnown RBP16■□□□□ 0.15
COL4A6-206ENST00000477085 TXNP10599 105 aaKnown RBP16■□□□□ 0.15
COL4A6-206ENST00000477085 CTGFP29279 349 aa16■□□□□ 0.15
COL4A6-206ENST00000477085 NMT1P30419 496 aaKnown RBP16■□□□□ 0.15
COL4A6-206ENST00000477085 PRKCEQ02156 737 aa16■□□□□ 0.15
COL4A6-206ENST00000477085 KCNA1Q09470 495 aa16■□□□□ 0.15
COL4A6-206ENST00000477085 KRT31Q15323 416 aa16■□□□□ 0.15
COL4A6-206ENST00000477085 XKR9Q5GH70 373 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms