RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 TBX1O43435 398 aa7.5□□□□□ -1.21
NUP58-209ENST00000476553 LTBRP36941 435 aa7.5□□□□□ -1.21
NUP58-209ENST00000476553 PPP2R5EQ16537 467 aa7.5□□□□□ -1.21
NUP58-209ENST00000476553 ODR4Q5SWX8 454 aa7.5□□□□□ -1.21
NUP58-209ENST00000476553 POLNQ7Z5Q5 900 aa7.5□□□□□ -1.21
NUP58-209ENST00000476553 IL17DQ8TAD2 202 aa7.5□□□□□ -1.21
NUP58-209ENST00000476553 RASGRP4Q8TDF6 673 aa7.5□□□□□ -1.21
NUP58-209ENST00000476553 CLDND1Q9NY35 253 aa7.5□□□□□ -1.21
NUP58-209ENST00000476553 ZFP69BQ9UJL9 534 aa7.5□□□□□ -1.21
NUP58-209ENST00000476553 PTPN22Q9Y2R2 807 aa7.5□□□□□ -1.21
NUP58-209ENST00000476553 PCDHA2Q9Y5H9 948 aa7.5□□□□□ -1.21
NUP58-209ENST00000476553 MAFKO60675 156 aa7.49□□□□□ -1.21
NUP58-209ENST00000476553 ZNF888P0CJ79 500 aaPredicted RBP7.49□□□□□ -1.21
NUP58-209ENST00000476553 LCP1P13796 627 aa7.49□□□□□ -1.21
NUP58-209ENST00000476553 PTMSP20962 102 aa7.49□□□□□ -1.21
NUP58-209ENST00000476553 HOXC12P31275 282 aa7.49□□□□□ -1.21
NUP58-209ENST00000476553 USP10Q14694 798 aaKnown RBP7.49□□□□□ -1.21
NUP58-209ENST00000476553 FNDC7Q5VTL7 733 aa7.49□□□□□ -1.21
NUP58-209ENST00000476553 MAMDC4Q6UXC1 1216 aa7.49□□□□□ -1.21
NUP58-209ENST00000476553 C1orf210Q8IVY1 113 aa7.49□□□□□ -1.21
NUP58-209ENST00000476553 PNISRQ8TF01 805 aaKnown RBP7.49□□□□□ -1.21
NUP58-209ENST00000476553 SRPK1Q96SB4 655 aaKnown RBP7.49□□□□□ -1.21
NUP58-209ENST00000476553 CDIP1Q9H305 208 aa7.49□□□□□ -1.21
NUP58-209ENST00000476553 SIRPGQ9P1W8 387 aa7.49□□□□□ -1.21
NUP58-209ENST00000476553 OAZ3Q9UMX2 235 aa7.49□□□□□ -1.21
NUP58-209ENST00000476553 SNRPB2P08579 225 aaKnown RBP7.48□□□□□ -1.21
NUP58-209ENST00000476553 ACRV1P26436 265 aa7.48□□□□□ -1.21
NUP58-209ENST00000476553 RAC3P60763 192 aa7.48□□□□□ -1.21
NUP58-209ENST00000476553 DUSP8Q13202 625 aa7.48□□□□□ -1.21
NUP58-209ENST00000476553 SKIDA1Q1XH10 827 aa7.48□□□□□ -1.21
NUP58-209ENST00000476553 PPIL6Q8IXY8 311 aa7.48□□□□□ -1.21
NUP58-209ENST00000476553 PNMA2Q9UL42 364 aa7.48□□□□□ -1.21
NUP58-209ENST00000476553 CDC45O75419 566 aa7.47□□□□□ -1.21
NUP58-209ENST00000476553 FBXO21O94952 628 aa7.47□□□□□ -1.21
NUP58-209ENST00000476553 ECI1P42126 302 aa7.47□□□□□ -1.21
NUP58-209ENST00000476553 PRSS53Q2L4Q9 553 aa7.47□□□□□ -1.21
NUP58-209ENST00000476553 CCSAPQ6IQ19 270 aaPredicted RBP7.47□□□□□ -1.21
NUP58-209ENST00000476553 TRIM48Q8IWZ4 208 aa7.47□□□□□ -1.21
NUP58-209ENST00000476553 GPRASP2Q96D09 838 aa7.47□□□□□ -1.21
NUP58-209ENST00000476553 AGAP2Q99490 1192 aa7.47□□□□□ -1.21
NUP58-209ENST00000476553 IER2Q9BTL4 223 aa7.47□□□□□ -1.21
NUP58-209ENST00000476553 PPFIA2O75334 1257 aa7.46□□□□□ -1.22
NUP58-209ENST00000476553 ADH4P08319 380 aa7.46□□□□□ -1.22
NUP58-209ENST00000476553 NCAPHQ15003 741 aa7.46□□□□□ -1.22
NUP58-209ENST00000476553 ZNF568Q3ZCX4 644 aa7.46□□□□□ -1.22
NUP58-209ENST00000476553 DENND5AQ6IQ26 1287 aa7.46□□□□□ -1.22
NUP58-209ENST00000476553 CLEC4GQ6UXB4 293 aa7.46□□□□□ -1.22
NUP58-209ENST00000476553 C11orf96Q7Z7L8 435 aa7.46□□□□□ -1.22
NUP58-209ENST00000476553 ZNF227Q86WZ6 799 aa7.46□□□□□ -1.22
NUP58-209ENST00000476553 STPG3Q8N7X2 389 aa7.46□□□□□ -1.22
NUP58-209ENST00000476553 FAM169BQ8N8A8 192 aa7.46□□□□□ -1.22
NUP58-209ENST00000476553 GPATCH11Q8N954 259 aa7.46□□□□□ -1.22
NUP58-209ENST00000476553 LARP4BQ92615 738 aaKnown RBP7.46□□□□□ -1.22
NUP58-209ENST00000476553 PPP1R14AQ96A00 147 aa7.46□□□□□ -1.22
NUP58-209ENST00000476553 C1orf159Q96HA4 380 aa7.46□□□□□ -1.22
NUP58-209ENST00000476553 CHAMP1Q96JM3 812 aa7.46□□□□□ -1.22
NUP58-209ENST00000476553 PLEKHG4BQ96PX9 1271 aa7.46□□□□□ -1.22
NUP58-209ENST00000476553 CRAMP1Q96RY5 1269 aa7.46□□□□□ -1.22
NUP58-209ENST00000476553 SLC6A20Q9NP91 592 aa7.46□□□□□ -1.22
NUP58-209ENST00000476553 GNL3LQ9NVN8 582 aaKnown RBP7.46□□□□□ -1.22
NUP58-209ENST00000476553 FANCLQ9NW38 375 aa7.46□□□□□ -1.22
NUP58-209ENST00000476553 KRIT1O00522 736 aa7.45□□□□□ -1.22
NUP58-209ENST00000476553 CPP00450 1065 aa7.45□□□□□ -1.22
NUP58-209ENST00000476553 CKMP06732 381 aa7.45□□□□□ -1.22
NUP58-209ENST00000476553 TUBA3CQ13748 450 aa7.45□□□□□ -1.22
NUP58-209ENST00000476553 UBE4AQ14139 1066 aa7.45□□□□□ -1.22
NUP58-209ENST00000476553 RNF151Q2KHN1 245 aa7.45□□□□□ -1.22
NUP58-209ENST00000476553 TUBA3EQ6PEY2 450 aa7.45□□□□□ -1.22
NUP58-209ENST00000476553 CLEC4DQ8WXI8 215 aa7.45□□□□□ -1.22
NUP58-209ENST00000476553 VOPP1Q96AW1 172 aa7.45□□□□□ -1.22
NUP58-209ENST00000476553 ZG16BQ96DA0 208 aa7.45□□□□□ -1.22
NUP58-209ENST00000476553 FAM89AQ96GI7 184 aa7.45□□□□□ -1.22
NUP58-209ENST00000476553 PDGFDQ9GZP0 370 aaPredicted RBP7.45□□□□□ -1.22
NUP58-209ENST00000476553 ARHGAP20Q9P2F6 1191 aa7.45□□□□□ -1.22
NUP58-209ENST00000476553 TCEAL9Q9UHQ7 104 aa7.45□□□□□ -1.22
NUP58-209ENST00000476553 NPFFR2Q9Y5X5 522 aa7.45□□□□□ -1.22
NUP58-209ENST00000476553 H0Y858 1186 aa7.44□□□□□ -1.22
NUP58-209ENST00000476553 SSBP05455 408 aaKnown RBP eCLIP7.44□□□□□ -1.22
NUP58-209ENST00000476553 VIL1P09327 827 aaKnown RBP7.44□□□□□ -1.22
NUP58-209ENST00000476553 CR2P20023 1033 aa7.44□□□□□ -1.22
NUP58-209ENST00000476553 GFRA1P56159 465 aa7.44□□□□□ -1.22
NUP58-209ENST00000476553 FOXD4Q12950 439 aaPredicted RBP7.44□□□□□ -1.22
NUP58-209ENST00000476553 SF1Q15637 639 aaKnown RBP7.44□□□□□ -1.22
NUP58-209ENST00000476553 APPBP2Q92624 585 aa7.44□□□□□ -1.22
NUP58-209ENST00000476553 MMRN2Q9H8L6 949 aa7.44□□□□□ -1.22
NUP58-209ENST00000476553 ZNF408Q9H9D4 720 aa7.44□□□□□ -1.22
NUP58-209ENST00000476553 SNTG2Q9NY99 539 aa7.44□□□□□ -1.22
NUP58-209ENST00000476553 EID1Q9Y6B2 187 aa7.44□□□□□ -1.22
NUP58-209ENST00000476553 COMMD10Q9Y6G5 202 aa7.44□□□□□ -1.22
NUP58-209ENST00000476553 SLC27A2O14975 620 aa7.43□□□□□ -1.22
NUP58-209ENST00000476553 WDHD1O75717 1129 aaPredicted RBP7.43□□□□□ -1.22
NUP58-209ENST00000476553 IL18BPO95998 194 aa7.43□□□□□ -1.22
NUP58-209ENST00000476553 ITGAVP06756 1048 aa7.43□□□□□ -1.22
NUP58-209ENST00000476553 FAHP16930 419 aa7.43□□□□□ -1.22
NUP58-209ENST00000476553 GLRBP48167 497 aa7.43□□□□□ -1.22
NUP58-209ENST00000476553 GYS2P54840 703 aa7.43□□□□□ -1.22
NUP58-209ENST00000476553 GRIN1Q05586 938 aa7.43□□□□□ -1.22
NUP58-209ENST00000476553 OS9Q13438 667 aaPredicted RBP7.43□□□□□ -1.22
NUP58-209ENST00000476553 MAP9Q49MG5 647 aa7.43□□□□□ -1.22
NUP58-209ENST00000476553 CD276Q5ZPR3 534 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms