RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 ZCRB1Q8TBF4 217 aaKnown RBP6.95□□□□□ -1.3
PTCD3-211ENST00000476215 USP7Q93009 1102 aa6.95□□□□□ -1.3
PTCD3-211ENST00000476215 SPATA25Q9BR10 227 aa6.95□□□□□ -1.3
PTCD3-211ENST00000476215 THG1LQ9NWX6 298 aaKnown RBP6.95□□□□□ -1.3
PTCD3-211ENST00000476215 COL4A3BPQ9Y5P4 624 aa6.95□□□□□ -1.3
PTCD3-211ENST00000476215 ZBTB48P10074 688 aaPredicted RBP6.94□□□□□ -1.3
PTCD3-211ENST00000476215 FAHP16930 419 aa6.94□□□□□ -1.3
PTCD3-211ENST00000476215 SARSP49591 514 aaKnown RBP6.94□□□□□ -1.3
PTCD3-211ENST00000476215 IL2P60568 153 aa6.94□□□□□ -1.3
PTCD3-211ENST00000476215 ADAM9Q13443 819 aa6.94□□□□□ -1.3
PTCD3-211ENST00000476215 SEC23AQ15436 765 aa6.94□□□□□ -1.3
PTCD3-211ENST00000476215 ZNF174Q15697 407 aa6.94□□□□□ -1.3
PTCD3-211ENST00000476215 TEPPQ6URK8 271 aa6.94□□□□□ -1.3
PTCD3-211ENST00000476215 TTLL7Q6ZT98 887 aa6.94□□□□□ -1.3
PTCD3-211ENST00000476215 ZNF761Q86XN6 746 aaPredicted RBP6.94□□□□□ -1.3
PTCD3-211ENST00000476215 AFAP1L2Q8N4X5 818 aa6.94□□□□□ -1.3
PTCD3-211ENST00000476215 SMC1BQ8NDV3 1235 aa6.94□□□□□ -1.3
PTCD3-211ENST00000476215 CHTF18Q8WVB6 975 aa6.94□□□□□ -1.3
PTCD3-211ENST00000476215 GPR101Q96P66 508 aaPredicted RBP6.94□□□□□ -1.3
PTCD3-211ENST00000476215 FAM126AQ9BYI3 521 aaPredicted RBP6.94□□□□□ -1.3
PTCD3-211ENST00000476215 PCIF1Q9H4Z3 704 aa6.94□□□□□ -1.3
PTCD3-211ENST00000476215 B3GALT1Q9Y5Z6 326 aa6.94□□□□□ -1.3
PTCD3-211ENST00000476215 PRAMEF25A6NGN4 478 aa6.93□□□□□ -1.3
PTCD3-211ENST00000476215 ACOT7O00154 380 aa6.93□□□□□ -1.3
PTCD3-211ENST00000476215 LRG1P02750 347 aa6.93□□□□□ -1.3
PTCD3-211ENST00000476215 CPEP16870 476 aa6.93□□□□□ -1.3
PTCD3-211ENST00000476215 SYN1P17600 705 aa6.93□□□□□ -1.3
PTCD3-211ENST00000476215 IBSPP21815 317 aaPredicted RBP6.93□□□□□ -1.3
PTCD3-211ENST00000476215 KIF11P52732 1056 aa6.93□□□□□ -1.3
PTCD3-211ENST00000476215 NKX3-2P78367 333 aa6.93□□□□□ -1.3
PTCD3-211ENST00000476215 TMEM132BQ14DG7 1078 aa6.93□□□□□ -1.3
PTCD3-211ENST00000476215 FAM26FQ5R3K3 315 aa6.93□□□□□ -1.3
PTCD3-211ENST00000476215 GPATCH3Q96I76 525 aa6.93□□□□□ -1.3
PTCD3-211ENST00000476215 TTC1Q99614 292 aa6.93□□□□□ -1.3
PTCD3-211ENST00000476215 SYT3Q9BQG1 590 aa6.93□□□□□ -1.3
PTCD3-211ENST00000476215 KRTAP9-3Q9BYQ3 159 aa6.93□□□□□ -1.3
PTCD3-211ENST00000476215 PCDH12Q9NPG4 1184 aa6.93□□□□□ -1.3
PTCD3-211ENST00000476215 KCNH7Q9NS40 1196 aa6.93□□□□□ -1.3
PTCD3-211ENST00000476215 OXSMQ9NWU1 459 aa6.93□□□□□ -1.3
PTCD3-211ENST00000476215 H2AFY2Q9P0M6 372 aaPredicted RBP6.93□□□□□ -1.3
PTCD3-211ENST00000476215 CNOT11Q9UKZ1 510 aaKnown RBP6.93□□□□□ -1.3
PTCD3-211ENST00000476215 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.92□□□□□ -1.3
PTCD3-211ENST00000476215 FKBP9O95302 570 aa6.92□□□□□ -1.3
PTCD3-211ENST00000476215 C4BPAP04003 597 aaKnown RBP6.92□□□□□ -1.3
PTCD3-211ENST00000476215 ADCYAP1R1P41586 468 aa6.92□□□□□ -1.3
PTCD3-211ENST00000476215 KPNA1P52294 538 aaPredicted RBP6.92□□□□□ -1.3
PTCD3-211ENST00000476215 AMPD3Q01432 767 aa6.92□□□□□ -1.3
PTCD3-211ENST00000476215 SMAD4Q13485 552 aaKnown RBP6.92□□□□□ -1.3
PTCD3-211ENST00000476215 NT5DC1Q5TFE4 455 aa6.92□□□□□ -1.3
PTCD3-211ENST00000476215 FKBP9P1Q75LS8 142 aa6.92□□□□□ -1.3
PTCD3-211ENST00000476215 KIAA1958Q8N8K9 716 aa6.92□□□□□ -1.3
PTCD3-211ENST00000476215 ATL2Q8NHH9 583 aa6.92□□□□□ -1.3
PTCD3-211ENST00000476215 ADAMTS17Q8TE56 1095 aa6.92□□□□□ -1.3
PTCD3-211ENST00000476215 DLG3Q92796 817 aa6.92□□□□□ -1.3
PTCD3-211ENST00000476215 IFT22Q9H7X7 185 aa6.92□□□□□ -1.3
PTCD3-211ENST00000476215 NEMP1O14524 444 aa6.91□□□□□ -1.3
PTCD3-211ENST00000476215 ZNF28P17035 718 aa6.91□□□□□ -1.3
PTCD3-211ENST00000476215 SLC9A1P19634 815 aa6.91□□□□□ -1.3
PTCD3-211ENST00000476215 POU3F3P20264 500 aaPredicted RBP6.91□□□□□ -1.3
PTCD3-211ENST00000476215 OCRLQ01968 901 aa6.91□□□□□ -1.3
PTCD3-211ENST00000476215 CREB3L3Q68CJ9 461 aa6.91□□□□□ -1.3
PTCD3-211ENST00000476215 C11orf74Q86VG3 221 aa6.91□□□□□ -1.3
PTCD3-211ENST00000476215 ZDHHC14Q8IZN3 488 aa6.91□□□□□ -1.3
PTCD3-211ENST00000476215 ADAM7Q9H2U9 754 aa6.91□□□□□ -1.3
PTCD3-211ENST00000476215 MCM8Q9UJA3 840 aa6.91□□□□□ -1.3
PTCD3-211ENST00000476215 ATP8A1Q9Y2Q0 1164 aa6.91□□□□□ -1.3
PTCD3-211ENST00000476215 DVL2O14641 736 aa6.9□□□□□ -1.3
PTCD3-211ENST00000476215 BPIP17213 487 aa6.9□□□□□ -1.3
PTCD3-211ENST00000476215 ID4P47928 161 aa6.9□□□□□ -1.3
PTCD3-211ENST00000476215 LSSP48449 732 aa6.9□□□□□ -1.3
PTCD3-211ENST00000476215 CD276Q5ZPR3 534 aa6.9□□□□□ -1.3
PTCD3-211ENST00000476215 CC2D1AQ6P1N0 951 aaPredicted RBP6.9□□□□□ -1.3
PTCD3-211ENST00000476215 PROSER1Q86XN7 944 aa6.9□□□□□ -1.3
PTCD3-211ENST00000476215 DDX42Q86XP3 938 aaKnown RBP eCLIP6.9□□□□□ -1.3
PTCD3-211ENST00000476215 EFHBQ8N7U6 833 aa6.9□□□□□ -1.3
PTCD3-211ENST00000476215 ACSS2Q9NR19 701 aa6.9□□□□□ -1.3
PTCD3-211ENST00000476215 SPTLC3Q9NUV7 552 aa6.9□□□□□ -1.3
PTCD3-211ENST00000476215 RBPJLQ9UBG7 517 aa6.9□□□□□ -1.3
PTCD3-211ENST00000476215 WASF3Q9UPY6 502 aa6.9□□□□□ -1.3
PTCD3-211ENST00000476215 NOP58Q9Y2X3 529 aaKnown RBP6.9□□□□□ -1.3
PTCD3-211ENST00000476215 hCG_2014768A0A024R1R8 64 aa6.89□□□□□ -1.31
PTCD3-211ENST00000476215 C9orf118A6NHY6 69 aa6.89□□□□□ -1.31
PTCD3-211ENST00000476215 FOXP2O15409 715 aa6.89□□□□□ -1.31
PTCD3-211ENST00000476215 PRICKLE3O43900 615 aaPredicted RBP6.89□□□□□ -1.31
PTCD3-211ENST00000476215 ZEB2O60315 1214 aa6.89□□□□□ -1.31
PTCD3-211ENST00000476215 BRINP1O60477 761 aa6.89□□□□□ -1.31
PTCD3-211ENST00000476215 EYA4O95677 639 aa6.89□□□□□ -1.31
PTCD3-211ENST00000476215 MMEP08473 750 aa6.89□□□□□ -1.31
PTCD3-211ENST00000476215 BUD31P41223 144 aaPredicted RBP6.89□□□□□ -1.31
PTCD3-211ENST00000476215 GJA9P57773 515 aa6.89□□□□□ -1.31
PTCD3-211ENST00000476215 DBPQ10586 325 aaPredicted RBP6.89□□□□□ -1.31
PTCD3-211ENST00000476215 STAT4Q14765 748 aa6.89□□□□□ -1.31
PTCD3-211ENST00000476215 ATP13A4Q4VNC1 1196 aa6.89□□□□□ -1.31
PTCD3-211ENST00000476215 LCE5AQ5TCM9 118 aa6.89□□□□□ -1.31
PTCD3-211ENST00000476215 VASNQ6EMK4 673 aa6.89□□□□□ -1.31
PTCD3-211ENST00000476215 TMC5Q6UXY8 1006 aa6.89□□□□□ -1.31
PTCD3-211ENST00000476215 PASD1Q8IV76 773 aa6.89□□□□□ -1.31
PTCD3-211ENST00000476215 WRNIP1Q96S55 665 aa6.89□□□□□ -1.31
PTCD3-211ENST00000476215 TMEM209Q96SK2 561 aa6.89□□□□□ -1.31
PTCD3-211ENST00000476215 ELF4Q99607 663 aaPredicted RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms