RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 PSMC4P43686 418 aa5.05□□□□□ -1.6
VPS13D-206ENST00000476045 MAPK8P45983 427 aa5.05□□□□□ -1.6
VPS13D-206ENST00000476045 PICALMQ13492 652 aa5.05□□□□□ -1.6
VPS13D-206ENST00000476045 MOGSQ13724 837 aa5.05□□□□□ -1.6
VPS13D-206ENST00000476045 TTF1Q15361 905 aaPredicted RBP5.05□□□□□ -1.6
VPS13D-206ENST00000476045 SLC4A8Q2Y0W8 1093 aa5.05□□□□□ -1.6
VPS13D-206ENST00000476045 NAA16Q6N069 864 aaPredicted RBP5.05□□□□□ -1.6
VPS13D-206ENST00000476045 MIGA2Q7L4E1 593 aa5.05□□□□□ -1.6
VPS13D-206ENST00000476045 TMEM57Q8N5G2 664 aa5.05□□□□□ -1.6
VPS13D-206ENST00000476045 RNF214Q8ND24 703 aa5.05□□□□□ -1.6
VPS13D-206ENST00000476045 GPBAR1Q8TDU6 330 aa5.05□□□□□ -1.6
VPS13D-206ENST00000476045 SOCS4Q8WXH5 440 aa5.05□□□□□ -1.6
VPS13D-206ENST00000476045 NEUROD6Q96NK8 337 aa5.05□□□□□ -1.6
VPS13D-206ENST00000476045 HTATIP2Q9BUP3 242 aa5.05□□□□□ -1.6
VPS13D-206ENST00000476045 UPF2Q9HAU5 1272 aaKnown RBP5.05□□□□□ -1.6
VPS13D-206ENST00000476045 MKNK2Q9HBH9 465 aa5.05□□□□□ -1.6
VPS13D-206ENST00000476045 DDX4Q9NQI0 724 aaKnown RBP5.05□□□□□ -1.6
VPS13D-206ENST00000476045 PI4KBQ9UBF8 816 aa5.05□□□□□ -1.6
VPS13D-206ENST00000476045 AFG3L2Q9Y4W6 797 aa5.05□□□□□ -1.6
VPS13D-206ENST00000476045 MYH4Q9Y623 1939 aa5.05□□□□□ -1.6
VPS13D-206ENST00000476045 DNAH12Q6ZR08 3092 aa5.05□□□□□ -1.6
VPS13D-206ENST00000476045 PNMA6EA0A0J9YXQ4 647 aa5.04□□□□□ -1.6
VPS13D-206ENST00000476045 RBM47A0AV96 593 aaKnown RBP5.04□□□□□ -1.6
VPS13D-206ENST00000476045 DDTLA6NHG4 134 aaPredicted RBP5.04□□□□□ -1.6
VPS13D-206ENST00000476045 TNPO2O14787 897 aaKnown RBP5.04□□□□□ -1.6
VPS13D-206ENST00000476045 CYP26A1O43174 497 aa5.04□□□□□ -1.6
VPS13D-206ENST00000476045 PRPF40AO75400 957 aaKnown RBP5.04□□□□□ -1.6
VPS13D-206ENST00000476045 PAGE1O75459 146 aa5.04□□□□□ -1.6
VPS13D-206ENST00000476045 GNA15P30679 374 aa5.04□□□□□ -1.6
VPS13D-206ENST00000476045 GRK4P32298 578 aa5.04□□□□□ -1.6
VPS13D-206ENST00000476045 TIMM10P62072 90 aa5.04□□□□□ -1.6
VPS13D-206ENST00000476045 IRX3P78415 501 aaPredicted RBP5.04□□□□□ -1.6
VPS13D-206ENST00000476045 ATP8B2P98198 1209 aa5.04□□□□□ -1.6
VPS13D-206ENST00000476045 ATP2B2Q01814 1243 aa5.04□□□□□ -1.6
VPS13D-206ENST00000476045 MAP3K12Q12852 859 aa5.04□□□□□ -1.6
VPS13D-206ENST00000476045 TTLL4Q14679 1199 aa5.04□□□□□ -1.6
VPS13D-206ENST00000476045 RASIP1Q5U651 963 aa5.04□□□□□ -1.6
VPS13D-206ENST00000476045 GADL1Q6ZQY3 521 aa5.04□□□□□ -1.6
VPS13D-206ENST00000476045 METTL16Q86W50 562 aaKnown RBP5.04□□□□□ -1.6
VPS13D-206ENST00000476045 SMYD4Q8IYR2 804 aaPredicted RBP5.04□□□□□ -1.6
VPS13D-206ENST00000476045 CRACR2BQ8N4Y2 399 aaPredicted RBP5.04□□□□□ -1.6
VPS13D-206ENST00000476045 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.04□□□□□ -1.6
VPS13D-206ENST00000476045 COA7Q96BR5 231 aa5.04□□□□□ -1.6
VPS13D-206ENST00000476045 FBXL18Q96ME1 805 aa5.04□□□□□ -1.6
VPS13D-206ENST00000476045 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.04□□□□□ -1.6
VPS13D-206ENST00000476045 TMOD4Q9NZQ9 345 aa5.04□□□□□ -1.6
VPS13D-206ENST00000476045 ZC3H7BQ9UGR2 993 aaKnown RBP5.04□□□□□ -1.6
VPS13D-206ENST00000476045 DDX19BQ9UMR2 479 aa5.04□□□□□ -1.6
VPS13D-206ENST00000476045 ZHX2Q9Y6X8 837 aa5.04□□□□□ -1.6
VPS13D-206ENST00000476045 PLXNA1Q9UIW2 1896 aa5.04□□□□□ -1.6
VPS13D-206ENST00000476045 RLFQ13129 1914 aa5.03□□□□□ -1.6
VPS13D-206ENST00000476045 NCOR1O75376 2440 aa5.03□□□□□ -1.6
VPS13D-206ENST00000476045 COL11A1P12107 1806 aaPredicted RBP5.03□□□□□ -1.6
VPS13D-206ENST00000476045 A0A1W2PPC1 479 aa5.03□□□□□ -1.6
VPS13D-206ENST00000476045 TRIM75PA6NK02 468 aa5.03□□□□□ -1.6
VPS13D-206ENST00000476045 C19orf81C9J6K1 198 aa5.03□□□□□ -1.6
VPS13D-206ENST00000476045 SURF6O75683 361 aaKnown RBP5.03□□□□□ -1.6
VPS13D-206ENST00000476045 HMGCRP04035 888 aa5.03□□□□□ -1.6
VPS13D-206ENST00000476045 GJB1P08034 283 aa5.03□□□□□ -1.6
VPS13D-206ENST00000476045 CAP2P40123 477 aa5.03□□□□□ -1.6
VPS13D-206ENST00000476045 GJA8P48165 433 aa5.03□□□□□ -1.6
VPS13D-206ENST00000476045 IRAK1P51617 712 aa5.03□□□□□ -1.6
VPS13D-206ENST00000476045 USP14P54578 494 aa5.03□□□□□ -1.6
VPS13D-206ENST00000476045 PRKCZQ05513 592 aa5.03□□□□□ -1.6
VPS13D-206ENST00000476045 CEP85Q6P2H3 762 aa5.03□□□□□ -1.6
VPS13D-206ENST00000476045 DNAJC14Q6Y2X3 702 aaPredicted RBP5.03□□□□□ -1.6
VPS13D-206ENST00000476045 SV2BQ7L1I2 683 aa5.03□□□□□ -1.6
VPS13D-206ENST00000476045 KRTAP19-1Q8IUB9 90 aa5.03□□□□□ -1.6
VPS13D-206ENST00000476045 ZNF384Q8TF68 577 aa5.03□□□□□ -1.6
VPS13D-206ENST00000476045 GAL3ST3Q96A11 431 aa5.03□□□□□ -1.6
VPS13D-206ENST00000476045 ISL2Q96A47 359 aa5.03□□□□□ -1.6
VPS13D-206ENST00000476045 KIF1BPQ96EK5 621 aa5.03□□□□□ -1.6
VPS13D-206ENST00000476045 ARHGAP39Q9C0H5 1083 aa5.03□□□□□ -1.6
VPS13D-206ENST00000476045 PIDD1Q9HB75 910 aa5.03□□□□□ -1.6
VPS13D-206ENST00000476045 AATFQ9NY61 560 aaKnown RBP eCLIP5.03□□□□□ -1.6
VPS13D-206ENST00000476045 MORF4L1Q9UBU8 362 aa5.03□□□□□ -1.6
VPS13D-206ENST00000476045 CPA4Q9UI42 421 aa5.03□□□□□ -1.6
VPS13D-206ENST00000476045 SERPINB13Q9UIV8 391 aa5.03□□□□□ -1.6
VPS13D-206ENST00000476045 DBNLQ9UJU6 430 aaKnown RBP5.03□□□□□ -1.6
VPS13D-206ENST00000476045 PCOLCE2Q9UKZ9 415 aa5.03□□□□□ -1.6
VPS13D-206ENST00000476045 ZBTB21Q9ULJ3 1066 aa5.03□□□□□ -1.6
VPS13D-206ENST00000476045 SAMM50Q9Y512 469 aa5.03□□□□□ -1.6
VPS13D-206ENST00000476045 LAMA2P24043 3122 aaKnown RBP5.03□□□□□ -1.6
VPS13D-206ENST00000476045 RAB11FIP3O75154 756 aa5.02□□□□□ -1.61
VPS13D-206ENST00000476045 IDH1O75874 414 aaKnown RBP5.02□□□□□ -1.61
VPS13D-206ENST00000476045 GLRX3O76003 335 aaKnown RBP5.02□□□□□ -1.61
VPS13D-206ENST00000476045 FARP2O94887 1054 aaPredicted RBP5.02□□□□□ -1.61
VPS13D-206ENST00000476045 CELA3AP09093 270 aa5.02□□□□□ -1.61
VPS13D-206ENST00000476045 USP17L7P0C7H9 530 aa5.02□□□□□ -1.61
VPS13D-206ENST00000476045 CYP2C8P10632 490 aa5.02□□□□□ -1.61
VPS13D-206ENST00000476045 ITGB5P18084 799 aa5.02□□□□□ -1.61
VPS13D-206ENST00000476045 ERCC3P19447 782 aa5.02□□□□□ -1.61
VPS13D-206ENST00000476045 MAPK4P31152 587 aa5.02□□□□□ -1.61
VPS13D-206ENST00000476045 HOXA7P31268 230 aaPredicted RBP5.02□□□□□ -1.61
VPS13D-206ENST00000476045 HMGCS2P54868 508 aa5.02□□□□□ -1.61
VPS13D-206ENST00000476045 BACE1P56817 501 aa5.02□□□□□ -1.61
VPS13D-206ENST00000476045 CCNA1P78396 465 aa5.02□□□□□ -1.61
VPS13D-206ENST00000476045 FGD1P98174 961 aa5.02□□□□□ -1.61
VPS13D-206ENST00000476045 CDK5R2Q13319 367 aa5.02□□□□□ -1.61
VPS13D-206ENST00000476045 HDAC1Q13547 482 aaPredicted RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms