RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 GABBR1Q9UBS5 961 aa17.01■□□□□ 0.31
SNX13-207ENST00000475800 TRPC6Q9Y210 931 aa17.01■□□□□ 0.31
SNX13-207ENST00000475800 PRUNE2Q8WUY3 3088 aa17.01■□□□□ 0.31
SNX13-207ENST00000475800 CUL9Q8IWT3 2517 aa17.01■□□□□ 0.31
SNX13-207ENST00000475800 GRXCR1A8MXD5 290 aa17■□□□□ 0.31
SNX13-207ENST00000475800 FOSL2P15408 326 aa17■□□□□ 0.31
SNX13-207ENST00000475800 TXKP42681 527 aa17■□□□□ 0.31
SNX13-207ENST00000475800 PTK7Q13308 1070 aa17■□□□□ 0.31
SNX13-207ENST00000475800 BFSP2Q13515 415 aa17■□□□□ 0.31
SNX13-207ENST00000475800 PLCB4Q15147 1175 aa17■□□□□ 0.31
SNX13-207ENST00000475800 EPHA7Q15375 998 aa17■□□□□ 0.31
SNX13-207ENST00000475800 TMEM266Q2M3C6 531 aa17■□□□□ 0.31
SNX13-207ENST00000475800 CKAP2LQ8IYA6 745 aa17■□□□□ 0.31
SNX13-207ENST00000475800 CAGE1Q8TC20 777 aa17■□□□□ 0.31
SNX13-207ENST00000475800 ATP8B4Q8TF62 1192 aa17■□□□□ 0.31
SNX13-207ENST00000475800 BBXQ8WY36 941 aaPredicted RBP17■□□□□ 0.31
SNX13-207ENST00000475800 COL25A1Q9BXS0 654 aaPredicted RBP17■□□□□ 0.31
SNX13-207ENST00000475800 CDH23Q9H251 3354 aa17■□□□□ 0.31
SNX13-207ENST00000475800 TMEM60Q9H2L4 133 aa17■□□□□ 0.31
SNX13-207ENST00000475800 EIF4ENIF1Q9NRA8 985 aaKnown RBP17■□□□□ 0.31
SNX13-207ENST00000475800 MTMR6Q9Y217 621 aa17■□□□□ 0.31
SNX13-207ENST00000475800 COL1A2P08123 1366 aa17■□□□□ 0.31
SNX13-207ENST00000475800 EVPLQ92817 2033 aa16.99■□□□□ 0.31
SNX13-207ENST00000475800 RPLP2P05387 115 aaKnown RBP16.99■□□□□ 0.31
SNX13-207ENST00000475800 CSF2RAP15509 400 aa16.99■□□□□ 0.31
SNX13-207ENST00000475800 CYP2C18P33260 490 aa16.99■□□□□ 0.31
SNX13-207ENST00000475800 PRPHP41219 470 aa16.99■□□□□ 0.31
SNX13-207ENST00000475800 SPIRE1Q08AE8 756 aa16.99■□□□□ 0.31
SNX13-207ENST00000475800 PTGDRQ13258 359 aa16.99■□□□□ 0.31
SNX13-207ENST00000475800 GRIK4Q16099 956 aa16.99■□□□□ 0.31
SNX13-207ENST00000475800 NEK9Q8TD19 979 aa16.99■□□□□ 0.31
SNX13-207ENST00000475800 LMBR1Q8WVP7 490 aa16.99■□□□□ 0.31
SNX13-207ENST00000475800 RAB34Q9BZG1 259 aa16.99■□□□□ 0.31
SNX13-207ENST00000475800 HIPK3Q9H422 1215 aa16.99■□□□□ 0.31
SNX13-207ENST00000475800 NRBP2Q9NSY0 501 aa16.99■□□□□ 0.31
SNX13-207ENST00000475800 CEP131Q9UPN4 1083 aa16.99■□□□□ 0.31
SNX13-207ENST00000475800 PCDHB6Q9Y5E3 794 aa16.99■□□□□ 0.31
SNX13-207ENST00000475800 MYH15Q9Y2K3 1946 aa16.99■□□□□ 0.31
SNX13-207ENST00000475800 MYO9BQ13459 2157 aa16.98■□□□□ 0.31
SNX13-207ENST00000475800 PITPNM1O00562 1244 aa16.98■□□□□ 0.31
SNX13-207ENST00000475800 P4HBP07237 508 aaKnown RBP16.98■□□□□ 0.31
SNX13-207ENST00000475800 INSRRP14616 1297 aa16.98■□□□□ 0.31
SNX13-207ENST00000475800 DNAJB2P25686 324 aa16.98■□□□□ 0.31
SNX13-207ENST00000475800 PSMC5P62195 406 aa16.98■□□□□ 0.31
SNX13-207ENST00000475800 ADAM17P78536 824 aa16.98■□□□□ 0.31
SNX13-207ENST00000475800 RBL2Q08999 1139 aa16.98■□□□□ 0.31
SNX13-207ENST00000475800 ZNF484Q5JVG2 852 aa16.98■□□□□ 0.31
SNX13-207ENST00000475800 NCAPH2Q6IBW4 605 aa16.98■□□□□ 0.31
SNX13-207ENST00000475800 MFSD5Q6N075 450 aa16.98■□□□□ 0.31
SNX13-207ENST00000475800 FERMT3Q86UX7 667 aa16.98■□□□□ 0.31
SNX13-207ENST00000475800 SERINC5Q86VE9 423 aa16.98■□□□□ 0.31
SNX13-207ENST00000475800 PPP1R13LQ8WUF5 828 aa16.98■□□□□ 0.31
SNX13-207ENST00000475800 NOC4LQ9BVI4 516 aaKnown RBP16.98■□□□□ 0.31
SNX13-207ENST00000475800 SETD4Q9NVD3 440 aa16.98■□□□□ 0.31
SNX13-207ENST00000475800 STK24Q9Y6E0 443 aa16.98■□□□□ 0.31
SNX13-207ENST00000475800 UMODL1Q5DID0 1318 aa16.97■□□□□ 0.31
SNX13-207ENST00000475800 TANC1Q9C0D5 1861 aa16.97■□□□□ 0.31
SNX13-207ENST00000475800 MBLAC1A4D2B0 266 aaPredicted RBP16.97■□□□□ 0.31
SNX13-207ENST00000475800 EML1O00423 815 aa16.97■□□□□ 0.31
SNX13-207ENST00000475800 CAND2O75155 1236 aa16.97■□□□□ 0.31
SNX13-207ENST00000475800 OATP04181 439 aa16.97■□□□□ 0.31
SNX13-207ENST00000475800 CYP2C9P11712 490 aa16.97■□□□□ 0.31
SNX13-207ENST00000475800 PBX2P40425 430 aa16.97■□□□□ 0.31
SNX13-207ENST00000475800 QARSP47897 775 aaKnown RBP16.97■□□□□ 0.31
SNX13-207ENST00000475800 PRKCEQ02156 737 aa16.97■□□□□ 0.31
SNX13-207ENST00000475800 RESTQ13127 1097 aa16.97■□□□□ 0.31
SNX13-207ENST00000475800 NBR1Q14596 966 aa16.97■□□□□ 0.31
SNX13-207ENST00000475800 GRIN2CQ14957 1233 aa16.97■□□□□ 0.31
SNX13-207ENST00000475800 XKR3Q5GH77 459 aa16.97■□□□□ 0.31
SNX13-207ENST00000475800 ARL6IP4Q66PJ3 421 aaKnown RBP16.97■□□□□ 0.31
SNX13-207ENST00000475800 TAF2Q6P1X5 1199 aa16.97■□□□□ 0.31
SNX13-207ENST00000475800 C16orf59Q7L2K0 433 aa16.97■□□□□ 0.31
SNX13-207ENST00000475800 TMEM199Q8N511 208 aa16.97■□□□□ 0.31
SNX13-207ENST00000475800 C4orf32Q8N8J7 132 aa16.97■□□□□ 0.31
SNX13-207ENST00000475800 RETREG2Q8NC44 543 aa16.97■□□□□ 0.31
SNX13-207ENST00000475800 ERMNQ8TAM6 284 aa16.97■□□□□ 0.31
SNX13-207ENST00000475800 CTAGE1Q96RT6 745 aa16.97■□□□□ 0.31
SNX13-207ENST00000475800 TUBE1Q9UJT0 475 aa16.97■□□□□ 0.31
SNX13-207ENST00000475800 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.96■□□□□ 0.31
SNX13-207ENST00000475800 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.96■□□□□ 0.31
SNX13-207ENST00000475800 TREHO43280 583 aa16.96■□□□□ 0.31
SNX13-207ENST00000475800 PARNO95453 639 aaKnown RBP16.96■□□□□ 0.31
SNX13-207ENST00000475800 ATP4AP20648 1035 aa16.96■□□□□ 0.31
SNX13-207ENST00000475800 FXR2P51116 673 aaKnown RBP eCLIP16.96■□□□□ 0.31
SNX13-207ENST00000475800 CCL23P55773 120 aa16.96■□□□□ 0.31
SNX13-207ENST00000475800 ATP2C1P98194 919 aaPredicted RBP16.96■□□□□ 0.31
SNX13-207ENST00000475800 PPIGQ13427 754 aaKnown RBP eCLIP16.96■□□□□ 0.31
SNX13-207ENST00000475800 PDIA5Q14554 519 aa16.96■□□□□ 0.31
SNX13-207ENST00000475800 TMEM240Q5SV17 173 aa16.96■□□□□ 0.31
SNX13-207ENST00000475800 ZNF365Q70YC5 407 aa16.96■□□□□ 0.31
SNX13-207ENST00000475800 RSPH3Q86UC2 560 aa16.96■□□□□ 0.31
SNX13-207ENST00000475800 SPRYD3Q8NCJ5 442 aa16.96■□□□□ 0.31
SNX13-207ENST00000475800 PPM1EQ8WY54 764 aa16.96■□□□□ 0.31
SNX13-207ENST00000475800 ZNF862O60290 1169 aa16.95■□□□□ 0.3
SNX13-207ENST00000475800 TECP42680 631 aa16.95■□□□□ 0.3
SNX13-207ENST00000475800 ZNF200P98182 395 aaPredicted RBP16.95■□□□□ 0.3
SNX13-207ENST00000475800 HIC1Q14526 733 aa16.95■□□□□ 0.3
SNX13-207ENST00000475800 UGCGQ16739 394 aa16.95■□□□□ 0.3
SNX13-207ENST00000475800 HAUS3Q68CZ6 603 aa16.95■□□□□ 0.3
SNX13-207ENST00000475800 DTHD1Q6ZMT9 781 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms