RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 DDX12PQ92771 950 aa19.34■□□□□ 0.69
CCM2-207ENST00000475551 NSUN4Q96CB9 384 aaKnown RBP19.34■□□□□ 0.69
CCM2-207ENST00000475551 CDK5RAP3Q96JB5 506 aa19.34■□□□□ 0.69
CCM2-207ENST00000475551 CCNL1Q9UK58 526 aaPredicted RBP19.34■□□□□ 0.69
CCM2-207ENST00000475551 PNMA2Q9UL42 364 aa19.34■□□□□ 0.69
CCM2-207ENST00000475551 C15orf41Q9Y2V0 281 aa19.34■□□□□ 0.69
CCM2-207ENST00000475551 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.34■□□□□ 0.69
CCM2-207ENST00000475551 LY75O60449 1722 aa19.34■□□□□ 0.69
CCM2-207ENST00000475551 TTI1O43156 1089 aa19.33■□□□□ 0.69
CCM2-207ENST00000475551 CHN1P15882 459 aa19.33■□□□□ 0.69
CCM2-207ENST00000475551 MMP13P45452 471 aa19.33■□□□□ 0.69
CCM2-207ENST00000475551 ZNF268Q14587 947 aaPredicted RBP19.33■□□□□ 0.69
CCM2-207ENST00000475551 SLFN11Q7Z7L1 901 aa19.33■□□□□ 0.69
CCM2-207ENST00000475551 TPCN2Q8NHX9 752 aa19.33■□□□□ 0.69
CCM2-207ENST00000475551 ATXN2LQ8WWM7 1075 aaKnown RBP19.33■□□□□ 0.69
CCM2-207ENST00000475551 MTMR9Q96QG7 549 aa19.33■□□□□ 0.69
CCM2-207ENST00000475551 LZTS2Q9BRK4 669 aa19.33■□□□□ 0.69
CCM2-207ENST00000475551 LRRC4CQ9HCJ2 640 aa19.33■□□□□ 0.69
CCM2-207ENST00000475551 SUCLA2Q9P2R7 463 aaPredicted RBP19.33■□□□□ 0.69
CCM2-207ENST00000475551 STXBP5LQ9Y2K9 1186 aa19.33■□□□□ 0.69
CCM2-207ENST00000475551 BZW2Q9Y6E2 419 aaKnown RBP19.33■□□□□ 0.69
CCM2-207ENST00000475551 CAND2O75155 1236 aa19.33■□□□□ 0.68
CCM2-207ENST00000475551 MMEP08473 750 aa19.33■□□□□ 0.68
CCM2-207ENST00000475551 NUDT17P0C025 328 aa19.33■□□□□ 0.68
CCM2-207ENST00000475551 ITGA4P13612 1032 aa19.33■□□□□ 0.68
CCM2-207ENST00000475551 GNA11P29992 359 aa19.33■□□□□ 0.68
CCM2-207ENST00000475551 TXKP42681 527 aa19.33■□□□□ 0.68
CCM2-207ENST00000475551 PGM2Q96G03 612 aa19.33■□□□□ 0.68
CCM2-207ENST00000475551 GOLPH3Q9H4A6 298 aa19.33■□□□□ 0.68
CCM2-207ENST00000475551 C6orf50Q9HD87 102 aa19.33■□□□□ 0.68
CCM2-207ENST00000475551 TNS1Q9HBL0 1735 aaKnown RBP19.32■□□□□ 0.68
CCM2-207ENST00000475551 KIAA1551Q9HCM1 1747 aa19.32■□□□□ 0.68
CCM2-207ENST00000475551 PALM3A6NDB9 673 aaPredicted RBP19.32■□□□□ 0.68
CCM2-207ENST00000475551 NAPAP54920 295 aa19.32■□□□□ 0.68
CCM2-207ENST00000475551 POU5F1Q01860 360 aaKnown RBP19.32■□□□□ 0.68
CCM2-207ENST00000475551 PTK2Q05397 1052 aa19.32■□□□□ 0.68
CCM2-207ENST00000475551 MYO1EQ12965 1108 aa19.32■□□□□ 0.68
CCM2-207ENST00000475551 GRIK3Q13003 919 aa19.32■□□□□ 0.68
CCM2-207ENST00000475551 UBE4AQ14139 1066 aa19.32■□□□□ 0.68
CCM2-207ENST00000475551 IRF2BP2Q7Z5L9 587 aa19.32■□□□□ 0.68
CCM2-207ENST00000475551 LMBR1Q8WVP7 490 aa19.32■□□□□ 0.68
CCM2-207ENST00000475551 TCP11Q8WWU5 503 aa19.32■□□□□ 0.68
CCM2-207ENST00000475551 FMO2Q99518 471 aa19.32■□□□□ 0.68
CCM2-207ENST00000475551 CCDC134Q9H6E4 229 aa19.32■□□□□ 0.68
CCM2-207ENST00000475551 KCNMB3Q9NPA1 279 aa19.32■□□□□ 0.68
CCM2-207ENST00000475551 CCDC88AQ3V6T2 1871 aa19.32■□□□□ 0.68
CCM2-207ENST00000475551 ANP32DO95626 131 aa19.32■□□□□ 0.68
CCM2-207ENST00000475551 ALADP13716 330 aa19.32■□□□□ 0.68
CCM2-207ENST00000475551 SEPT2Q15019 361 aa19.32■□□□□ 0.68
CCM2-207ENST00000475551 ENOX2Q16206 610 aaKnown RBP19.32■□□□□ 0.68
CCM2-207ENST00000475551 TRPM8Q7Z2W7 1104 aa19.32■□□□□ 0.68
CCM2-207ENST00000475551 ZNF571Q7Z3V5 609 aaPredicted RBP19.32■□□□□ 0.68
CCM2-207ENST00000475551 KIRREL3Q8IZU9 778 aa19.32■□□□□ 0.68
CCM2-207ENST00000475551 LINC00116Q8NCU8 138 aa19.32■□□□□ 0.68
CCM2-207ENST00000475551 SAMD15Q9P1V8 674 aa19.32■□□□□ 0.68
CCM2-207ENST00000475551 ATAD5Q96QE3 1844 aa19.32■□□□□ 0.68
CCM2-207ENST00000475551 SMCO2A6NFE2 343 aa19.31■□□□□ 0.68
CCM2-207ENST00000475551 C11orf91Q3C1V1 193 aa19.31■□□□□ 0.68
CCM2-207ENST00000475551 CAVIN4Q5BKX8 364 aa19.31■□□□□ 0.68
CCM2-207ENST00000475551 PEX26Q7Z412 305 aa19.31■□□□□ 0.68
CCM2-207ENST00000475551 TBCKQ8TEA7 893 aa19.31■□□□□ 0.68
CCM2-207ENST00000475551 L3MBTL3Q96JM7 780 aaPredicted RBP19.31■□□□□ 0.68
CCM2-207ENST00000475551 RAB17Q9H0T7 212 aa19.31■□□□□ 0.68
CCM2-207ENST00000475551 NAGPAQ9UK23 515 aa19.31■□□□□ 0.68
CCM2-207ENST00000475551 TTC7AQ9ULT0 858 aaPredicted RBP19.31■□□□□ 0.68
CCM2-207ENST00000475551 ATP8A1Q9Y2Q0 1164 aa19.31■□□□□ 0.68
CCM2-207ENST00000475551 MYH4Q9Y623 1939 aa19.31■□□□□ 0.68
CCM2-207ENST00000475551 A0A0A6YYK5 440 aaPredicted RBP19.31■□□□□ 0.68
CCM2-207ENST00000475551 CLTAP09496 248 aa19.31■□□□□ 0.68
CCM2-207ENST00000475551 COASYQ13057 564 aa19.31■□□□□ 0.68
CCM2-207ENST00000475551 ATP8B4Q8TF62 1192 aa19.31■□□□□ 0.68
CCM2-207ENST00000475551 ADAM7Q9H2U9 754 aa19.31■□□□□ 0.68
CCM2-207ENST00000475551 SLC24A3Q9HC58 644 aa19.31■□□□□ 0.68
CCM2-207ENST00000475551 LRRC4BQ9NT99 713 aa19.31■□□□□ 0.68
CCM2-207ENST00000475551 ANXA13P27216 316 aa19.3■□□□□ 0.68
CCM2-207ENST00000475551 MECOMQ03112 1051 aa19.3■□□□□ 0.68
CCM2-207ENST00000475551 PDIA5Q14554 519 aa19.3■□□□□ 0.68
CCM2-207ENST00000475551 TMEM266Q2M3C6 531 aa19.3■□□□□ 0.68
CCM2-207ENST00000475551 TMEM119Q4V9L6 283 aa19.3■□□□□ 0.68
CCM2-207ENST00000475551 NAIF1Q69YI7 327 aaPredicted RBP19.3■□□□□ 0.68
CCM2-207ENST00000475551 PNMA8AQ86V59 439 aaPredicted RBP19.3■□□□□ 0.68
CCM2-207ENST00000475551 LRRC34Q8IZ02 419 aa19.3■□□□□ 0.68
CCM2-207ENST00000475551 SYCE1Q8N0S2 351 aa19.3■□□□□ 0.68
CCM2-207ENST00000475551 SPZ1Q9BXG8 430 aa19.3■□□□□ 0.68
CCM2-207ENST00000475551 CELF4Q9BZC1 486 aaKnown RBP19.3■□□□□ 0.68
CCM2-207ENST00000475551 DPH5Q9H2P9 285 aa19.3■□□□□ 0.68
CCM2-207ENST00000475551 CRKLP46109 303 aaKnown RBP19.3■□□□□ 0.68
CCM2-207ENST00000475551 CALCRLQ16602 461 aa19.3■□□□□ 0.68
CCM2-207ENST00000475551 ALKBH5Q6P6C2 394 aaKnown RBP19.3■□□□□ 0.68
CCM2-207ENST00000475551 TBC1D1Q86TI0 1168 aaPredicted RBP19.3■□□□□ 0.68
CCM2-207ENST00000475551 DNAJC19Q96DA6 116 aa19.3■□□□□ 0.68
CCM2-207ENST00000475551 THOC1Q96FV9 657 aaKnown RBP19.3■□□□□ 0.68
CCM2-207ENST00000475551 RAB34Q9BZG1 259 aa19.3■□□□□ 0.68
CCM2-207ENST00000475551 EPB41L4BQ9H329 900 aa19.3■□□□□ 0.68
CCM2-207ENST00000475551 NOP53Q9NZM5 478 aaKnown RBP19.3■□□□□ 0.68
CCM2-207ENST00000475551 NENFQ9UMX5 172 aa19.3■□□□□ 0.68
CCM2-207ENST00000475551 TRPC6Q9Y210 931 aa19.3■□□□□ 0.68
CCM2-207ENST00000475551 ZNF831Q5JPB2 1677 aa19.29■□□□□ 0.68
CCM2-207ENST00000475551 CCDC169A6NNP5 214 aa19.29■□□□□ 0.68
CCM2-207ENST00000475551 NPEPPSP55786 919 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms