RNA–Protein interactions for RNA: ENST00000475378.5

RNF220-212, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-212ENST00000475378 HDAC1Q13547 482 aaPredicted RBP20.65■□□□□ 0.9
RNF220-212ENST00000475378 USP17L6PQ6QN14 398 aa20.65■□□□□ 0.9
RNF220-212ENST00000475378 NLRX1Q86UT6 975 aa20.65■□□□□ 0.9
RNF220-212ENST00000475378 MICAL1Q8TDZ2 1067 aa20.65■□□□□ 0.9
RNF220-212ENST00000475378 GPRASP2Q96D09 838 aa20.65■□□□□ 0.9
RNF220-212ENST00000475378 FAM49AQ9H0Q0 323 aaPredicted RBP20.65■□□□□ 0.9
RNF220-212ENST00000475378 SMARCAD1Q9H4L7 1026 aa20.65■□□□□ 0.9
RNF220-212ENST00000475378 SENP2Q9HC62 589 aa20.65■□□□□ 0.9
RNF220-212ENST00000475378 PIK3CDO00329 1044 aa20.64■□□□□ 0.89
RNF220-212ENST00000475378 INSRRP14616 1297 aa20.64■□□□□ 0.89
RNF220-212ENST00000475378 IGBP1P78318 339 aa20.64■□□□□ 0.89
RNF220-212ENST00000475378 TROAPQ12815 778 aa20.64■□□□□ 0.89
RNF220-212ENST00000475378 GLG1Q92896 1179 aa20.64■□□□□ 0.89
RNF220-212ENST00000475378 PCYT2Q99447 389 aa20.64■□□□□ 0.89
RNF220-212ENST00000475378 LNPKQ9C0E8 428 aa20.64■□□□□ 0.89
RNF220-212ENST00000475378 PCDHB12Q9Y5F1 795 aa20.64■□□□□ 0.89
RNF220-212ENST00000475378 GVINP1Q7Z2Y8 2422 aa20.63■□□□□ 0.89
RNF220-212ENST00000475378 KDM3AQ9Y4C1 1321 aa20.63■□□□□ 0.89
RNF220-212ENST00000475378 PRR23AA6NEV1 266 aa20.63■□□□□ 0.89
RNF220-212ENST00000475378 RRN3P2A6NIE6 340 aa20.63■□□□□ 0.89
RNF220-212ENST00000475378 FGF18O76093 207 aa20.63■□□□□ 0.89
RNF220-212ENST00000475378 NBL1P41271 181 aa20.63■□□□□ 0.89
RNF220-212ENST00000475378 SARSP49591 514 aaKnown RBP20.63■□□□□ 0.89
RNF220-212ENST00000475378 TMEM62Q0P6H9 643 aa20.63■□□□□ 0.89
RNF220-212ENST00000475378 PAK2Q13177 524 aa20.63■□□□□ 0.89
RNF220-212ENST00000475378 ANKRD54Q6NXT1 300 aa20.63■□□□□ 0.89
RNF220-212ENST00000475378 SYCE2Q6PIF2 218 aa20.63■□□□□ 0.89
RNF220-212ENST00000475378 SMARCC2Q8TAQ2 1214 aa20.63■□□□□ 0.89
RNF220-212ENST00000475378 RASGRP4Q8TDF6 673 aa20.63■□□□□ 0.89
RNF220-212ENST00000475378 DIAPH3Q9NSV4 1193 aa20.63■□□□□ 0.89
RNF220-212ENST00000475378 LRFN2Q9ULH4 789 aa20.63■□□□□ 0.89
RNF220-212ENST00000475378 ITGB5P18084 799 aa20.62■□□□□ 0.89
RNF220-212ENST00000475378 PDE12Q6L8Q7 609 aaKnown RBP20.62■□□□□ 0.89
RNF220-212ENST00000475378 CDHR1Q96JP9 859 aa20.62■□□□□ 0.89
RNF220-212ENST00000475378 CELF4Q9BZC1 486 aaKnown RBP20.62■□□□□ 0.89
RNF220-212ENST00000475378 IL25Q9H293 177 aa20.62■□□□□ 0.89
RNF220-212ENST00000475378 HCSTQ9UBK5 93 aa20.62■□□□□ 0.89
RNF220-212ENST00000475378 PCDHA2Q9Y5H9 948 aa20.62■□□□□ 0.89
RNF220-212ENST00000475378 M0QZ92 97 aa20.61■□□□□ 0.89
RNF220-212ENST00000475378 MGEA5O60502 916 aa20.61■□□□□ 0.89
RNF220-212ENST00000475378 PLEKHM2Q8IWE5 1019 aa20.61■□□□□ 0.89
RNF220-212ENST00000475378 CUL5Q93034 780 aa20.61■□□□□ 0.89
RNF220-212ENST00000475378 OSBPL3Q9H4L5 887 aa20.61■□□□□ 0.89
RNF220-212ENST00000475378 AAASQ9NRG9 546 aa20.61■□□□□ 0.89
RNF220-212ENST00000475378 CACNA1AO00555 2505 aa20.61■□□□□ 0.89
RNF220-212ENST00000475378 TECP42680 631 aa20.6■□□□□ 0.89
RNF220-212ENST00000475378 TMEM266Q2M3C6 531 aa20.6■□□□□ 0.89
RNF220-212ENST00000475378 TMEM105Q8N8V8 129 aa20.6■□□□□ 0.89
RNF220-212ENST00000475378 COLGALT1Q8NBJ5 622 aa20.6■□□□□ 0.89
RNF220-212ENST00000475378 KREMEN2Q8NCW0 462 aa20.6■□□□□ 0.89
RNF220-212ENST00000475378 PIBF1Q8WXW3 757 aa20.6■□□□□ 0.89
RNF220-212ENST00000475378 TRPC6Q9Y210 931 aa20.6■□□□□ 0.89
RNF220-212ENST00000475378 PCDHB7Q9Y5E2 793 aa20.6■□□□□ 0.89
RNF220-212ENST00000475378 UBIAD1Q9Y5Z9 338 aa20.6■□□□□ 0.89
RNF220-212ENST00000475378 TBKBP1A7MCY6 615 aa20.59■□□□□ 0.89
RNF220-212ENST00000475378 HIP1O00291 1037 aa20.59■□□□□ 0.89
RNF220-212ENST00000475378 SP100P23497 879 aaPredicted RBP20.59■□□□□ 0.89
RNF220-212ENST00000475378 SPOUT1Q5T280 376 aaKnown RBP20.59■□□□□ 0.89
RNF220-212ENST00000475378 FAM102BQ5T8I3 360 aa20.59■□□□□ 0.89
RNF220-212ENST00000475378 ZBTB33Q86T24 672 aa20.59■□□□□ 0.89
RNF220-212ENST00000475378 TRAPPC12Q8WVT3 735 aa20.59■□□□□ 0.89
RNF220-212ENST00000475378 APOL5Q9BWW9 433 aa20.59■□□□□ 0.89
RNF220-212ENST00000475378 CWH43Q9H720 699 aa20.59■□□□□ 0.89
RNF220-212ENST00000475378 ERVK-5Q9HDB9 667 aa20.59■□□□□ 0.89
RNF220-212ENST00000475378 TYW1Q9NV66 732 aaKnown RBP20.59■□□□□ 0.89
RNF220-212ENST00000475378 TMEM260Q9NX78 707 aa20.59■□□□□ 0.89
RNF220-212ENST00000475378 LZTS1Q9Y250 596 aa20.59■□□□□ 0.89
RNF220-212ENST00000475378 SMIM35A0A1B0GVV1 85 aa20.58■□□□□ 0.89
RNF220-212ENST00000475378 IFIT3O14879 490 aaKnown RBP20.58■□□□□ 0.89
RNF220-212ENST00000475378 BRD1O95696 1058 aa20.58■□□□□ 0.89
RNF220-212ENST00000475378 SRGAP2BP0DMP2 458 aa20.58■□□□□ 0.89
RNF220-212ENST00000475378 KRT76Q01546 638 aa20.58■□□□□ 0.89
RNF220-212ENST00000475378 MTMR1Q13613 665 aa20.58■□□□□ 0.89
RNF220-212ENST00000475378 PLCB4Q15147 1175 aa20.58■□□□□ 0.89
RNF220-212ENST00000475378 PLPP4Q5VZY2 271 aa20.58■□□□□ 0.89
RNF220-212ENST00000475378 DIEXFQ68CQ4 756 aaKnown RBP20.58■□□□□ 0.89
RNF220-212ENST00000475378 FAM43BQ6ZT52 329 aaPredicted RBP20.58■□□□□ 0.89
RNF220-212ENST00000475378 ERMP1Q7Z2K6 904 aa20.58■□□□□ 0.89
RNF220-212ENST00000475378 UBALD2Q8IYN6 164 aa20.58■□□□□ 0.89
RNF220-212ENST00000475378 THNSL1Q8IYQ7 743 aa20.58■□□□□ 0.89
RNF220-212ENST00000475378 NME8Q8N427 588 aa20.58■□□□□ 0.89
RNF220-212ENST00000475378 SPZ1Q9BXG8 430 aa20.58■□□□□ 0.89
RNF220-212ENST00000475378 PKD2L1Q9P0L9 805 aa20.58■□□□□ 0.89
RNF220-212ENST00000475378 CDH22Q9UJ99 828 aa20.58■□□□□ 0.89
RNF220-212ENST00000475378 SORCS3Q9UPU3 1222 aa20.58■□□□□ 0.89
RNF220-212ENST00000475378 WDR87Q6ZQQ6 2873 aa20.58■□□□□ 0.88
RNF220-212ENST00000475378 C9IYK1 514 aa20.57■□□□□ 0.88
RNF220-212ENST00000475378 HOXB8P17481 243 aaPredicted RBP20.57■□□□□ 0.88
RNF220-212ENST00000475378 IBSPP21815 317 aaPredicted RBP20.57■□□□□ 0.88
RNF220-212ENST00000475378 PLCB3Q01970 1234 aa20.57■□□□□ 0.88
RNF220-212ENST00000475378 APOBRQ0VD83 1088 aa20.57■□□□□ 0.88
RNF220-212ENST00000475378 NFX1Q12986 1120 aaKnown RBP20.57■□□□□ 0.88
RNF220-212ENST00000475378 MTMR3Q13615 1198 aa20.57■□□□□ 0.88
RNF220-212ENST00000475378 MRPS27Q92552 414 aaKnown RBP20.57■□□□□ 0.88
RNF220-212ENST00000475378 JADE2Q9NQC1 790 aa20.57■□□□□ 0.88
RNF220-212ENST00000475378 RGS18Q9NS28 235 aa20.57■□□□□ 0.88
RNF220-212ENST00000475378 NR2E1Q9Y466 385 aa20.57■□□□□ 0.88
RNF220-212ENST00000475378 DMXL1Q9Y485 3027 aa20.56■□□□□ 0.88
RNF220-212ENST00000475378 HIDE1A8MVS5 230 aa20.56■□□□□ 0.88
RNF220-212ENST00000475378 C2CD4DB7Z1M9 353 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 794.4 ms