RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 MB21D2Q8IYB1 491 aaPredicted RBP23.44■■□□□ 1.34
VPS36-203ENST00000475375 CMTR1Q8N1G2 835 aaKnown RBP23.44■■□□□ 1.34
VPS36-203ENST00000475375 SMRP1Q8NCR6 262 aa23.44■■□□□ 1.34
VPS36-203ENST00000475375 TRAPPC12Q8WVT3 735 aa23.44■■□□□ 1.34
VPS36-203ENST00000475375 BARX2Q9UMQ3 279 aaPredicted RBP23.44■■□□□ 1.34
VPS36-203ENST00000475375 SQORQ9Y6N5 450 aa23.44■■□□□ 1.34
VPS36-203ENST00000475375 TECTAO75443 2155 aa23.44■■□□□ 1.34
VPS36-203ENST00000475375 CHMLP26374 656 aa23.43■■□□□ 1.34
VPS36-203ENST00000475375 SRBD1Q8N5C6 995 aaKnown RBP23.43■■□□□ 1.34
VPS36-203ENST00000475375 EXOC6Q8TAG9 804 aa23.43■■□□□ 1.34
VPS36-203ENST00000475375 PCYT2Q99447 389 aa23.43■■□□□ 1.34
VPS36-203ENST00000475375 JADE2Q9NQC1 790 aa23.43■■□□□ 1.34
VPS36-203ENST00000475375 SLC9A2Q9UBY0 812 aa23.43■■□□□ 1.34
VPS36-203ENST00000475375 USP15Q9Y4E8 981 aaPredicted RBP23.43■■□□□ 1.34
VPS36-203ENST00000475375 PCDHGC5Q9Y5F6 944 aa23.43■■□□□ 1.34
VPS36-203ENST00000475375 hCG_1642624A0A1W2PR95 340 aa23.42■■□□□ 1.34
VPS36-203ENST00000475375 CCDC69A6NI79 296 aa23.42■■□□□ 1.34
VPS36-203ENST00000475375 MAFGO15525 162 aa23.42■■□□□ 1.34
VPS36-203ENST00000475375 COASYQ13057 564 aa23.42■■□□□ 1.34
VPS36-203ENST00000475375 TMEM266Q2M3C6 531 aa23.42■■□□□ 1.34
VPS36-203ENST00000475375 CRIPAKQ8N1N5 446 aa23.42■■□□□ 1.34
VPS36-203ENST00000475375 CELF4Q9BZC1 486 aaKnown RBP23.42■■□□□ 1.34
VPS36-203ENST00000475375 TLE6Q9H808 572 aa23.42■■□□□ 1.34
VPS36-203ENST00000475375 PCDHA6Q9UN73 950 aa23.42■■□□□ 1.34
VPS36-203ENST00000475375 PCDHA8Q9Y5H6 950 aa23.42■■□□□ 1.34
VPS36-203ENST00000475375 PCDHA2Q9Y5H9 948 aa23.42■■□□□ 1.34
VPS36-203ENST00000475375 IGSF9BQ9UPX0 1349 aa23.41■■□□□ 1.34
VPS36-203ENST00000475375 PRC1O43663 620 aa23.41■■□□□ 1.34
VPS36-203ENST00000475375 RXRAP19793 462 aa23.41■■□□□ 1.34
VPS36-203ENST00000475375 PTPN5P54829 565 aa23.41■■□□□ 1.34
VPS36-203ENST00000475375 KRT76Q01546 638 aa23.41■■□□□ 1.34
VPS36-203ENST00000475375 NFX1Q12986 1120 aaKnown RBP23.41■■□□□ 1.34
VPS36-203ENST00000475375 PLCB4Q15147 1175 aa23.41■■□□□ 1.34
VPS36-203ENST00000475375 BMP8AQ7Z5Y6 402 aa23.41■■□□□ 1.34
VPS36-203ENST00000475375 CCDC82Q8N4S0 544 aa23.41■■□□□ 1.34
VPS36-203ENST00000475375 PRSS33Q8NF86 280 aa23.41■■□□□ 1.34
VPS36-203ENST00000475375 PHOX2BQ99453 314 aa23.41■■□□□ 1.34
VPS36-203ENST00000475375 SDF4Q9BRK5 362 aa23.41■■□□□ 1.34
VPS36-203ENST00000475375 GINS2Q9Y248 185 aa23.41■■□□□ 1.34
VPS36-203ENST00000475375 PCDHB7Q9Y5E2 793 aa23.41■■□□□ 1.34
VPS36-203ENST00000475375 PCDHB12Q9Y5F1 795 aa23.41■■□□□ 1.34
VPS36-203ENST00000475375 LOC730098B7Z3J9 87 aa23.4■■□□□ 1.34
VPS36-203ENST00000475375 PDE4AP27815 886 aa23.4■■□□□ 1.34
VPS36-203ENST00000475375 ZXDAP98168 799 aa23.4■■□□□ 1.34
VPS36-203ENST00000475375 IER5LQ5T953 404 aa23.4■■□□□ 1.34
VPS36-203ENST00000475375 HEATR3Q7Z4Q2 680 aa23.4■■□□□ 1.34
VPS36-203ENST00000475375 RPGRIP1Q96KN7 1286 aa23.4■■□□□ 1.34
VPS36-203ENST00000475375 KIAA1671Q9BY89 1806 aa23.39■■□□□ 1.33
VPS36-203ENST00000475375 PER2O15055 1255 aa23.39■■□□□ 1.33
VPS36-203ENST00000475375 GLP2RO95838 553 aa23.39■■□□□ 1.33
VPS36-203ENST00000475375 STAT5BP51692 787 aa23.39■■□□□ 1.33
VPS36-203ENST00000475375 PKN1Q16512 942 aa23.39■■□□□ 1.33
VPS36-203ENST00000475375 RAB11FIP4Q86YS3 637 aa23.39■■□□□ 1.33
VPS36-203ENST00000475375 TMTC2Q8N394 836 aa23.39■■□□□ 1.33
VPS36-203ENST00000475375 PHF7Q9BWX1 381 aaPredicted RBP23.39■■□□□ 1.33
VPS36-203ENST00000475375 AAASQ9NRG9 546 aa23.39■■□□□ 1.33
VPS36-203ENST00000475375 KCNH7Q9NS40 1196 aa23.39■■□□□ 1.33
VPS36-203ENST00000475375 RBM8AQ9Y5S9 174 aaKnown RBP23.39■■□□□ 1.33
VPS36-203ENST00000475375 SARSP49591 514 aaKnown RBP23.38■■□□□ 1.33
VPS36-203ENST00000475375 ACTR2P61160 394 aa23.38■■□□□ 1.33
VPS36-203ENST00000475375 PLPPR4Q7Z2D5 763 aa23.38■■□□□ 1.33
VPS36-203ENST00000475375 NME8Q8N427 588 aa23.38■■□□□ 1.33
VPS36-203ENST00000475375 PRRX2Q99811 253 aa23.38■■□□□ 1.33
VPS36-203ENST00000475375 MXRA8Q9BRK3 442 aa23.38■■□□□ 1.33
VPS36-203ENST00000475375 TMX1Q9H3N1 280 aa23.38■■□□□ 1.33
VPS36-203ENST00000475375 SMIM35A0A1B0GVV1 85 aa23.37■■□□□ 1.33
VPS36-203ENST00000475375 DENND3A2RUS2 1198 aa23.37■■□□□ 1.33
VPS36-203ENST00000475375 TBKBP1A7MCY6 615 aa23.37■■□□□ 1.33
VPS36-203ENST00000475375 SGSM2O43147 1006 aa23.37■■□□□ 1.33
VPS36-203ENST00000475375 CALM1P0DP23 149 aa23.37■■□□□ 1.33
VPS36-203ENST00000475375 CALM2P0DP24 149 aa23.37■■□□□ 1.33
VPS36-203ENST00000475375 CALM3P0DP25 149 aa23.37■■□□□ 1.33
VPS36-203ENST00000475375 CBX2Q14781 532 aaPredicted RBP23.37■■□□□ 1.33
VPS36-203ENST00000475375 MTHFD1LQ6UB35 978 aa23.37■■□□□ 1.33
VPS36-203ENST00000475375 THNSL1Q8IYQ7 743 aa23.37■■□□□ 1.33
VPS36-203ENST00000475375 TLR9Q9NR96 1032 aa23.37■■□□□ 1.33
VPS36-203ENST00000475375 KDM3AQ9Y4C1 1321 aa23.36■■□□□ 1.33
VPS36-203ENST00000475375 SH2B2O14492 632 aaPredicted RBP23.36■■□□□ 1.33
VPS36-203ENST00000475375 RPS6KA5O75582 802 aa23.36■■□□□ 1.33
VPS36-203ENST00000475375 MCM5P33992 734 aa23.36■■□□□ 1.33
VPS36-203ENST00000475375 RBM10P98175 930 aaKnown RBP23.36■■□□□ 1.33
VPS36-203ENST00000475375 UBE3AQ05086 875 aa23.36■■□□□ 1.33
VPS36-203ENST00000475375 FBXL6Q8N531 539 aa23.36■■□□□ 1.33
VPS36-203ENST00000475375 CYP2W1Q8TAV3 490 aa23.36■■□□□ 1.33
VPS36-203ENST00000475375 MAP4K1Q92918 833 aa23.36■■□□□ 1.33
VPS36-203ENST00000475375 TMEM87BQ96K49 555 aa23.36■■□□□ 1.33
VPS36-203ENST00000475375 RNF216Q9NWF9 866 aaPredicted RBP23.36■■□□□ 1.33
VPS36-203ENST00000475375 SLC12A7Q9Y666 1083 aa23.36■■□□□ 1.33
VPS36-203ENST00000475375 NFASCO94856 1347 aa23.35■■□□□ 1.33
VPS36-203ENST00000475375 BACH1O14867 736 aa23.35■■□□□ 1.33
VPS36-203ENST00000475375 FGF18O76093 207 aa23.35■■□□□ 1.33
VPS36-203ENST00000475375 KLRC1P26715 233 aa23.35■■□□□ 1.33
VPS36-203ENST00000475375 NEK1Q96PY6 1258 aa23.35■■□□□ 1.33
VPS36-203ENST00000475375 ADAM2Q99965 735 aa23.35■■□□□ 1.33
VPS36-203ENST00000475375 MTA3Q9BTC8 594 aa23.35■■□□□ 1.33
VPS36-203ENST00000475375 TMEM260Q9NX78 707 aa23.35■■□□□ 1.33
VPS36-203ENST00000475375 NOC2LQ9Y3T9 749 aaKnown RBP23.35■■□□□ 1.33
VPS36-203ENST00000475375 ZDBF2Q9HCK1 2354 aa23.35■■□□□ 1.33
VPS36-203ENST00000475375 FSD2A1L4K1 749 aa23.34■■□□□ 1.33
VPS36-203ENST00000475375 DDX39AO00148 427 aaKnown RBP23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms