RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 ZNF365Q70YC5 407 aa18.28■□□□□ 0.52
SRM-204ENST00000475189 LRRC8DQ7L1W4 858 aa18.28■□□□□ 0.52
SRM-204ENST00000475189 RPUSD2Q8IZ73 545 aaKnown RBP18.28■□□□□ 0.52
SRM-204ENST00000475189 TRAPPC12Q8WVT3 735 aa18.28■□□□□ 0.52
SRM-204ENST00000475189 INTS4Q96HW7 963 aaKnown RBP18.28■□□□□ 0.52
SRM-204ENST00000475189 MTMR9Q96QG7 549 aa18.28■□□□□ 0.52
SRM-204ENST00000475189 TUBE1Q9UJT0 475 aa18.28■□□□□ 0.52
SRM-204ENST00000475189 MCM7P33993 719 aa18.27■□□□□ 0.52
SRM-204ENST00000475189 RFC2P35250 354 aa18.27■□□□□ 0.52
SRM-204ENST00000475189 THPOP40225 353 aa18.27■□□□□ 0.52
SRM-204ENST00000475189 TRAPPC10P48553 1259 aa18.27■□□□□ 0.52
SRM-204ENST00000475189 SPIRE1Q08AE8 756 aa18.27■□□□□ 0.52
SRM-204ENST00000475189 GPNMBQ14956 572 aa18.27■□□□□ 0.52
SRM-204ENST00000475189 ZNF174Q15697 407 aa18.27■□□□□ 0.52
SRM-204ENST00000475189 TTC38Q5R3I4 469 aa18.27■□□□□ 0.52
SRM-204ENST00000475189 MCTP1Q6DN14 999 aa18.27■□□□□ 0.52
SRM-204ENST00000475189 DEFB128Q7Z7B8 93 aa18.27■□□□□ 0.52
SRM-204ENST00000475189 CKAP2LQ8IYA6 745 aa18.27■□□□□ 0.52
SRM-204ENST00000475189 BBXQ8WY36 941 aaPredicted RBP18.27■□□□□ 0.52
SRM-204ENST00000475189 ZBTB10Q96DT7 871 aa18.27■□□□□ 0.52
SRM-204ENST00000475189 TMEM60Q9H2L4 133 aa18.27■□□□□ 0.52
SRM-204ENST00000475189 NOL7Q9UMY1 257 aaKnown RBP18.27■□□□□ 0.52
SRM-204ENST00000475189 LOXHD1Q8IVV2 1947 aa18.26■□□□□ 0.51
SRM-204ENST00000475189 ZBTB42B2RXF5 422 aa18.26■□□□□ 0.51
SRM-204ENST00000475189 TOB1P50616 345 aaPredicted RBP18.26■□□□□ 0.51
SRM-204ENST00000475189 ORC2Q13416 577 aaPredicted RBP18.26■□□□□ 0.51
SRM-204ENST00000475189 ZNF484Q5JVG2 852 aa18.26■□□□□ 0.51
SRM-204ENST00000475189 PSRC1Q6PGN9 363 aaPredicted RBP18.26■□□□□ 0.51
SRM-204ENST00000475189 TRMT1LQ7Z2T5 733 aaKnown RBP18.26■□□□□ 0.51
SRM-204ENST00000475189 COL1A2P08123 1366 aa18.26■□□□□ 0.51
SRM-204ENST00000475189 SIP14410 1827 aa18.26■□□□□ 0.51
SRM-204ENST00000475189 CAND2O75155 1236 aa18.25■□□□□ 0.51
SRM-204ENST00000475189 PARNO95453 639 aaKnown RBP18.25■□□□□ 0.51
SRM-204ENST00000475189 FGBP02675 491 aa18.25■□□□□ 0.51
SRM-204ENST00000475189 OATP04181 439 aa18.25■□□□□ 0.51
SRM-204ENST00000475189 KLRC1P26715 233 aa18.25■□□□□ 0.51
SRM-204ENST00000475189 TXKP42681 527 aa18.25■□□□□ 0.51
SRM-204ENST00000475189 PRKCEQ02156 737 aa18.25■□□□□ 0.51
SRM-204ENST00000475189 NBR1Q14596 966 aa18.25■□□□□ 0.51
SRM-204ENST00000475189 MBTPS1Q14703 1052 aa18.25■□□□□ 0.51
SRM-204ENST00000475189 EPHA7Q15375 998 aa18.25■□□□□ 0.51
SRM-204ENST00000475189 LRIT3Q3SXY7 679 aa18.25■□□□□ 0.51
SRM-204ENST00000475189 NCAPH2Q6IBW4 605 aa18.25■□□□□ 0.51
SRM-204ENST00000475189 TAF2Q6P1X5 1199 aa18.25■□□□□ 0.51
SRM-204ENST00000475189 MTHFD1LQ6UB35 978 aa18.25■□□□□ 0.51
SRM-204ENST00000475189 RPAINQ86UA6 219 aa18.25■□□□□ 0.51
SRM-204ENST00000475189 FAM167AQ96KS9 214 aa18.25■□□□□ 0.51
SRM-204ENST00000475189 TTC12Q9H892 705 aaPredicted RBP18.25■□□□□ 0.51
SRM-204ENST00000475189 NRBP2Q9NSY0 501 aa18.25■□□□□ 0.51
SRM-204ENST00000475189 FOXD4L1Q9NU39 408 aa18.25■□□□□ 0.51
SRM-204ENST00000475189 PCDHA12Q9UN75 941 aa18.25■□□□□ 0.51
SRM-204ENST00000475189 PCDHA2Q9Y5H9 948 aa18.25■□□□□ 0.51
SRM-204ENST00000475189 RSPH10B2B2RC85 870 aa18.24■□□□□ 0.51
SRM-204ENST00000475189 NBNO60934 754 aa18.24■□□□□ 0.51
SRM-204ENST00000475189 STBD1O95210 358 aa18.24■□□□□ 0.51
SRM-204ENST00000475189 PFKMP08237 780 aa18.24■□□□□ 0.51
SRM-204ENST00000475189 RSPH10BP0C881 870 aa18.24■□□□□ 0.51
SRM-204ENST00000475189 RASIP1Q5U651 963 aa18.24■□□□□ 0.51
SRM-204ENST00000475189 HSCBQ8IWL3 235 aa18.24■□□□□ 0.51
SRM-204ENST00000475189 C4orf32Q8N8J7 132 aa18.24■□□□□ 0.51
SRM-204ENST00000475189 BANK1Q8NDB2 785 aa18.24■□□□□ 0.51
SRM-204ENST00000475189 DNAJB3Q8WWF6 145 aa18.24■□□□□ 0.51
SRM-204ENST00000475189 HERVK_113Q902F9 699 aa18.24■□□□□ 0.51
SRM-204ENST00000475189 RNPC3Q96LT9 517 aaKnown RBP18.24■□□□□ 0.51
SRM-204ENST00000475189 PCDHB6Q9Y5E3 794 aa18.24■□□□□ 0.51
SRM-204ENST00000475189 RBAK-RBAKDNI3L0D1 243 aa18.23■□□□□ 0.51
SRM-204ENST00000475189 SOX1O00570 391 aaPredicted RBP18.23■□□□□ 0.51
SRM-204ENST00000475189 CXCL10P02778 98 aa18.23■□□□□ 0.51
SRM-204ENST00000475189 P4HBP07237 508 aaKnown RBP18.23■□□□□ 0.51
SRM-204ENST00000475189 CTSHP09668 335 aa18.23■□□□□ 0.51
SRM-204ENST00000475189 PDCP20941 246 aa18.23■□□□□ 0.51
SRM-204ENST00000475189 PSMC5P62195 406 aa18.23■□□□□ 0.51
SRM-204ENST00000475189 FAM26DQ5JW98 314 aa18.23■□□□□ 0.51
SRM-204ENST00000475189 OTOP2Q7RTS6 562 aa18.23■□□□□ 0.51
SRM-204ENST00000475189 FTOQ9C0B1 505 aaKnown RBP eCLIP18.23■□□□□ 0.51
SRM-204ENST00000475189 SMIM35A0A1B0GVV1 85 aa18.22■□□□□ 0.51
SRM-204ENST00000475189 C22orf31O95567 290 aa18.22■□□□□ 0.51
SRM-204ENST00000475189 OR52Z1P0C646 297 aa18.22■□□□□ 0.51
SRM-204ENST00000475189 QARSP47897 775 aaKnown RBP18.22■□□□□ 0.51
SRM-204ENST00000475189 MGAT3Q09327 533 aa18.22■□□□□ 0.51
SRM-204ENST00000475189 XKR3Q5GH77 459 aa18.22■□□□□ 0.51
SRM-204ENST00000475189 RSPH3Q86UC2 560 aa18.22■□□□□ 0.51
SRM-204ENST00000475189 DYDC2Q96IM9 177 aa18.22■□□□□ 0.51
SRM-204ENST00000475189 NIFKQ9BYG3 293 aaKnown RBP18.22■□□□□ 0.51
SRM-204ENST00000475189 FAM49AQ9H0Q0 323 aaPredicted RBP18.22■□□□□ 0.51
SRM-204ENST00000475189 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.22■□□□□ 0.51
SRM-204ENST00000475189 RGL1Q9NZL6 768 aa18.22■□□□□ 0.51
SRM-204ENST00000475189 CXXC1Q9P0U4 656 aaPredicted RBP18.22■□□□□ 0.51
SRM-204ENST00000475189 WRAP73Q9P2S5 460 aaPredicted RBP18.22■□□□□ 0.51
SRM-204ENST00000475189 CEP131Q9UPN4 1083 aa18.22■□□□□ 0.51
SRM-204ENST00000475189 CHRNA1P02708 482 aa18.21■□□□□ 0.51
SRM-204ENST00000475189 SYT1P21579 422 aa18.21■□□□□ 0.51
SRM-204ENST00000475189 TARBP2Q15633 366 aaKnown RBP18.21■□□□□ 0.51
SRM-204ENST00000475189 TCTN1Q2MV58 587 aa18.21■□□□□ 0.51
SRM-204ENST00000475189 RILPL1Q5EBL4 403 aa18.21■□□□□ 0.51
SRM-204ENST00000475189 EIF2AK1Q9BQI3 630 aaKnown RBP18.21■□□□□ 0.51
SRM-204ENST00000475189 OSBPL7Q9BZF2 842 aa18.21■□□□□ 0.51
SRM-204ENST00000475189 LAMA3Q16787 3333 aa18.21■□□□□ 0.51
SRM-204ENST00000475189 PTPRSQ13332 1948 aa18.2■□□□□ 0.5
SRM-204ENST00000475189 VPS37CA5D8V6 355 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms