RNA–Protein interactions for RNA: ENST00000474684.1

CPSF7-210, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-210ENST00000474684 CALM1P0DP23 149 aa6.78□□□□□ -1.32
CPSF7-210ENST00000474684 CALM2P0DP24 149 aa6.78□□□□□ -1.32
CPSF7-210ENST00000474684 CALM3P0DP25 149 aa6.78□□□□□ -1.32
CPSF7-210ENST00000474684 ARP10275 920 aa6.78□□□□□ -1.32
CPSF7-210ENST00000474684 GHRP10912 638 aa6.78□□□□□ -1.32
CPSF7-210ENST00000474684 GNAQP50148 359 aa6.78□□□□□ -1.32
CPSF7-210ENST00000474684 MGAT3Q09327 533 aa6.78□□□□□ -1.32
CPSF7-210ENST00000474684 APOBRQ0VD83 1088 aa6.78□□□□□ -1.32
CPSF7-210ENST00000474684 PPFIA1Q13136 1202 aa6.78□□□□□ -1.32
CPSF7-210ENST00000474684 ITGB3BPQ13352 177 aaPredicted RBP6.78□□□□□ -1.32
CPSF7-210ENST00000474684 MTMR1Q13613 665 aa6.78□□□□□ -1.32
CPSF7-210ENST00000474684 DHX32Q7L7V1 743 aaKnown RBP6.78□□□□□ -1.32
CPSF7-210ENST00000474684 NLRX1Q86UT6 975 aa6.78□□□□□ -1.32
CPSF7-210ENST00000474684 HS6ST3Q8IZP7 471 aa6.78□□□□□ -1.32
CPSF7-210ENST00000474684 MYOCDQ8IZQ8 938 aa6.78□□□□□ -1.32
CPSF7-210ENST00000474684 PHOSPHO2Q8TCD6 241 aa6.78□□□□□ -1.32
CPSF7-210ENST00000474684 RASGRP4Q8TDF6 673 aa6.78□□□□□ -1.32
CPSF7-210ENST00000474684 ADAMTS19Q8TE59 1207 aa6.78□□□□□ -1.32
CPSF7-210ENST00000474684 JAKMIP1Q96N16 626 aaKnown RBP6.78□□□□□ -1.32
CPSF7-210ENST00000474684 SENP7Q9BQF6 1050 aa6.78□□□□□ -1.32
CPSF7-210ENST00000474684 C17orf80Q9BSJ5 609 aa6.78□□□□□ -1.32
CPSF7-210ENST00000474684 JADE2Q9NQC1 790 aa6.78□□□□□ -1.32
CPSF7-210ENST00000474684 ZNF215Q9UL58 517 aaPredicted RBP6.78□□□□□ -1.32
CPSF7-210ENST00000474684 SNX14Q9Y5W7 946 aa6.78□□□□□ -1.32
CPSF7-210ENST00000474684 C2orf16Q68DN1 1984 aa6.78□□□□□ -1.32
CPSF7-210ENST00000474684 TECTAO75443 2155 aa6.78□□□□□ -1.32
CPSF7-210ENST00000474684 ABHD14A-ACY1A0A1B0GW23 586 aa6.77□□□□□ -1.33
CPSF7-210ENST00000474684 DDX39AO00148 427 aaKnown RBP6.77□□□□□ -1.33
CPSF7-210ENST00000474684 DTNBO60941 627 aa6.77□□□□□ -1.33
CPSF7-210ENST00000474684 CCNE2O96020 404 aa6.77□□□□□ -1.33
CPSF7-210ENST00000474684 CHRNA1P02708 482 aa6.77□□□□□ -1.33
CPSF7-210ENST00000474684 LINC00271P0C7V0 271 aa6.77□□□□□ -1.33
CPSF7-210ENST00000474684 HSPA4P34932 840 aa6.77□□□□□ -1.33
CPSF7-210ENST00000474684 ADD1P35611 737 aaKnown RBP6.77□□□□□ -1.33
CPSF7-210ENST00000474684 SREBF1P36956 1147 aa6.77□□□□□ -1.33
CPSF7-210ENST00000474684 CLK2P49760 499 aaKnown RBP6.77□□□□□ -1.33
CPSF7-210ENST00000474684 ADCY7P51828 1080 aa6.77□□□□□ -1.33
CPSF7-210ENST00000474684 IGBP1P78318 339 aa6.77□□□□□ -1.33
CPSF7-210ENST00000474684 HTRA4P83105 476 aaPredicted RBP6.77□□□□□ -1.33
CPSF7-210ENST00000474684 TMEM62Q0P6H9 643 aa6.77□□□□□ -1.33
CPSF7-210ENST00000474684 LPIN1Q14693 890 aa6.77□□□□□ -1.33
CPSF7-210ENST00000474684 GRIK4Q16099 956 aa6.77□□□□□ -1.33
CPSF7-210ENST00000474684 PKN1Q16512 942 aa6.77□□□□□ -1.33
CPSF7-210ENST00000474684 TSGA10IPQ3SY00 556 aa6.77□□□□□ -1.33
CPSF7-210ENST00000474684 MARCH8Q5T0T0 291 aa6.77□□□□□ -1.33
CPSF7-210ENST00000474684 RNF20Q5VTR2 975 aa6.77□□□□□ -1.33
CPSF7-210ENST00000474684 JAKMIP3Q5VZ66 844 aa6.77□□□□□ -1.33
CPSF7-210ENST00000474684 PPP1R18Q6NYC8 613 aa6.77□□□□□ -1.33
CPSF7-210ENST00000474684 XRRA1Q6P2D8 792 aa6.77□□□□□ -1.33
CPSF7-210ENST00000474684 Q6ZUG5 572 aa6.77□□□□□ -1.33
CPSF7-210ENST00000474684 TMTC2Q8N394 836 aa6.77□□□□□ -1.33
CPSF7-210ENST00000474684 CRYGNQ8WXF5 182 aa6.77□□□□□ -1.33
CPSF7-210ENST00000474684 KCNB2Q92953 911 aa6.77□□□□□ -1.33
CPSF7-210ENST00000474684 BRF1Q92994 677 aa6.77□□□□□ -1.33
CPSF7-210ENST00000474684 PHKBQ93100 1093 aa6.77□□□□□ -1.33
CPSF7-210ENST00000474684 ASB2Q96Q27 587 aa6.77□□□□□ -1.33
CPSF7-210ENST00000474684 MXRA8Q9BRK3 442 aa6.77□□□□□ -1.33
CPSF7-210ENST00000474684 USP26Q9BXU7 913 aa6.77□□□□□ -1.33
CPSF7-210ENST00000474684 FAM49AQ9H0Q0 323 aaPredicted RBP6.77□□□□□ -1.33
CPSF7-210ENST00000474684 SUGCTQ9HAC7 445 aa6.77□□□□□ -1.33
CPSF7-210ENST00000474684 RC3H2Q9HBD1 1191 aaKnown RBP6.77□□□□□ -1.33
CPSF7-210ENST00000474684 JPH1Q9HDC5 661 aaPredicted RBP6.77□□□□□ -1.33
CPSF7-210ENST00000474684 RIC8AQ9NPQ8 531 aa6.77□□□□□ -1.33
CPSF7-210ENST00000474684 KCNH7Q9NS40 1196 aa6.77□□□□□ -1.33
CPSF7-210ENST00000474684 RBM28Q9NW13 759 aaKnown RBP6.77□□□□□ -1.33
CPSF7-210ENST00000474684 TUBE1Q9UJT0 475 aa6.77□□□□□ -1.33
CPSF7-210ENST00000474684 NAP1L2Q9ULW6 460 aaPredicted RBP6.77□□□□□ -1.33
CPSF7-210ENST00000474684 DENND4AQ7Z401 1863 aa6.77□□□□□ -1.33
CPSF7-210ENST00000474684 ZDBF2Q9HCK1 2354 aa6.76□□□□□ -1.33
CPSF7-210ENST00000474684 DOCK6Q96HP0 2047 aa6.76□□□□□ -1.33
CPSF7-210ENST00000474684 IGLV3-22A0A075B6J6 115 aa6.76□□□□□ -1.33
CPSF7-210ENST00000474684 MBLAC1A4D2B0 266 aaPredicted RBP6.76□□□□□ -1.33
CPSF7-210ENST00000474684 KIF28PB7ZC32 967 aa6.76□□□□□ -1.33
CPSF7-210ENST00000474684 FAM86B1E9PN63 330 aa6.76□□□□□ -1.33
CPSF7-210ENST00000474684 GTPBP6O43824 516 aaPredicted RBP6.76□□□□□ -1.33
CPSF7-210ENST00000474684 EDIL3O43854 480 aa6.76□□□□□ -1.33
CPSF7-210ENST00000474684 UPP2O95045 317 aa6.76□□□□□ -1.33
CPSF7-210ENST00000474684 CSPG5O95196 566 aa6.76□□□□□ -1.33
CPSF7-210ENST00000474684 PARNO95453 639 aaKnown RBP6.76□□□□□ -1.33
CPSF7-210ENST00000474684 FAM86B2P0C5J1 330 aa6.76□□□□□ -1.33
CPSF7-210ENST00000474684 INSRRP14616 1297 aa6.76□□□□□ -1.33
CPSF7-210ENST00000474684 POU3F3P20264 500 aaPredicted RBP6.76□□□□□ -1.33
CPSF7-210ENST00000474684 METAP2P50579 478 aaKnown RBP eCLIP6.76□□□□□ -1.33
CPSF7-210ENST00000474684 ACTR2P61160 394 aa6.76□□□□□ -1.33
CPSF7-210ENST00000474684 ERVK-21P61565 698 aa6.76□□□□□ -1.33
CPSF7-210ENST00000474684 IKBKEQ14164 716 aa6.76□□□□□ -1.33
CPSF7-210ENST00000474684 PLCB4Q15147 1175 aa6.76□□□□□ -1.33
CPSF7-210ENST00000474684 SKIV2LQ15477 1246 aaKnown RBP6.76□□□□□ -1.33
CPSF7-210ENST00000474684 NTRK3Q16288 839 aa6.76□□□□□ -1.33
CPSF7-210ENST00000474684 PFKFB3Q16875 520 aaPredicted RBP6.76□□□□□ -1.33
CPSF7-210ENST00000474684 FAM26DQ5JW98 314 aa6.76□□□□□ -1.33
CPSF7-210ENST00000474684 FBXO47Q5MNV8 452 aa6.76□□□□□ -1.33
CPSF7-210ENST00000474684 CCDC60Q8IWA6 550 aaPredicted RBP6.76□□□□□ -1.33
CPSF7-210ENST00000474684 DNAJB3Q8WWF6 145 aa6.76□□□□□ -1.33
CPSF7-210ENST00000474684 ATXN2LQ8WWM7 1075 aaKnown RBP6.76□□□□□ -1.33
CPSF7-210ENST00000474684 SEPT1Q8WYJ6 367 aa6.76□□□□□ -1.33
CPSF7-210ENST00000474684 GLG1Q92896 1179 aa6.76□□□□□ -1.33
CPSF7-210ENST00000474684 TGS1Q96RS0 853 aaKnown RBP6.76□□□□□ -1.33
CPSF7-210ENST00000474684 RAD9AQ99638 391 aa6.76□□□□□ -1.33
CPSF7-210ENST00000474684 AGXT2Q9BYV1 514 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms