RNA–Protein interactions for RNA: ENST00000474557.1

HMGN1P10-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 10, humanhuman

BASIC

Gene HMGN1P10, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P10-201ENST00000474557 CCDC140Q96MF4 163 aa4.72□□□□□ -1.65
HMGN1P10-201ENST00000474557 ITGB1P05556 798 aa4.71□□□□□ -1.66
HMGN1P10-201ENST00000474557 CXXC5Q7LFL8 322 aaKnown RBP4.71□□□□□ -1.66
HMGN1P10-201ENST00000474557 GRASPQ7Z6J2 395 aaPredicted RBP4.71□□□□□ -1.66
HMGN1P10-201ENST00000474557 RTKN2Q8IZC4 609 aa4.71□□□□□ -1.66
HMGN1P10-201ENST00000474557 THAP3Q8WTV1 239 aaPredicted RBP4.71□□□□□ -1.66
HMGN1P10-201ENST00000474557 SYNPO2LQ9H987 977 aa4.71□□□□□ -1.66
HMGN1P10-201ENST00000474557 RSAD1Q9HA92 442 aa4.71□□□□□ -1.66
HMGN1P10-201ENST00000474557 FZD1Q9UP38 647 aa4.71□□□□□ -1.66
HMGN1P10-201ENST00000474557 A0A1W2PQH9 124 aa4.7□□□□□ -1.66
HMGN1P10-201ENST00000474557 FAM20BO75063 409 aa4.7□□□□□ -1.66
HMGN1P10-201ENST00000474557 POU3F3P20264 500 aaPredicted RBP4.7□□□□□ -1.66
HMGN1P10-201ENST00000474557 OR6P1Q8NGX9 317 aa4.7□□□□□ -1.66
HMGN1P10-201ENST00000474557 OR14K1Q8NGZ2 314 aa4.7□□□□□ -1.66
HMGN1P10-201ENST00000474557 SCARB1Q8WTV0 552 aa4.7□□□□□ -1.66
HMGN1P10-201ENST00000474557 BCL11AQ9H165 835 aa4.7□□□□□ -1.66
HMGN1P10-201ENST00000474557 SH3BP1Q9Y3L3 701 aa4.7□□□□□ -1.66
HMGN1P10-201ENST00000474557 GRID2IPA4D2P6 1211 aa4.69□□□□□ -1.66
HMGN1P10-201ENST00000474557 MRE11P49959 708 aa4.69□□□□□ -1.66
HMGN1P10-201ENST00000474557 SMAD3P84022 425 aaKnown RBP4.69□□□□□ -1.66
HMGN1P10-201ENST00000474557 SPIRE1Q08AE8 756 aa4.69□□□□□ -1.66
HMGN1P10-201ENST00000474557 ERCC6LQ2NKX8 1250 aa4.69□□□□□ -1.66
HMGN1P10-201ENST00000474557 FBXO42Q6P3S6 717 aa4.69□□□□□ -1.66
HMGN1P10-201ENST00000474557 VHLLQ6RSH7 139 aa4.69□□□□□ -1.66
HMGN1P10-201ENST00000474557 Q6ZRM9 215 aa4.69□□□□□ -1.66
HMGN1P10-201ENST00000474557 RHOUQ7L0Q8 258 aa4.69□□□□□ -1.66
HMGN1P10-201ENST00000474557 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.69□□□□□ -1.66
HMGN1P10-201ENST00000474557 C9orf106Q8NAJ2 232 aa4.69□□□□□ -1.66
HMGN1P10-201ENST00000474557 MRGPRX3Q96LB0 322 aa4.69□□□□□ -1.66
HMGN1P10-201ENST00000474557 GPR87Q9BY21 358 aa4.69□□□□□ -1.66
HMGN1P10-201ENST00000474557 INSL6Q9Y581 213 aa4.69□□□□□ -1.66
HMGN1P10-201ENST00000474557 A0A1W2PRX2 142 aa4.68□□□□□ -1.66
HMGN1P10-201ENST00000474557 MYADML2A6NDP7 307 aa4.68□□□□□ -1.66
HMGN1P10-201ENST00000474557 PATL2C9JE40 543 aaKnown RBP4.68□□□□□ -1.66
HMGN1P10-201ENST00000474557 C1RP00736 705 aa4.68□□□□□ -1.66
HMGN1P10-201ENST00000474557 SCG5P05408 212 aa4.68□□□□□ -1.66
HMGN1P10-201ENST00000474557 KCNJ6P48051 423 aa4.68□□□□□ -1.66
HMGN1P10-201ENST00000474557 EIF6P56537 245 aaKnown RBP4.68□□□□□ -1.66
HMGN1P10-201ENST00000474557 COL9A2Q14055 689 aaPredicted RBP4.68□□□□□ -1.66
HMGN1P10-201ENST00000474557 PPP2R5EQ16537 467 aa4.68□□□□□ -1.66
HMGN1P10-201ENST00000474557 RABL3Q5HYI8 236 aa4.68□□□□□ -1.66
HMGN1P10-201ENST00000474557 LARP4Q71RC2 724 aaKnown RBP eCLIP4.68□□□□□ -1.66
HMGN1P10-201ENST00000474557 OTOP2Q7RTS6 562 aa4.68□□□□□ -1.66
HMGN1P10-201ENST00000474557 FBXO33Q7Z6M2 555 aa4.68□□□□□ -1.66
HMGN1P10-201ENST00000474557 FILIP1Q7Z7B0 1213 aa4.68□□□□□ -1.66
HMGN1P10-201ENST00000474557 RBM12BQ8IXT5 1001 aaKnown RBP4.68□□□□□ -1.66
HMGN1P10-201ENST00000474557 WDR48Q8TAF3 677 aa4.68□□□□□ -1.66
HMGN1P10-201ENST00000474557 BTN2A2Q8WVV5 523 aa4.68□□□□□ -1.66
HMGN1P10-201ENST00000474557 MLST8Q9BVC4 326 aa4.68□□□□□ -1.66
HMGN1P10-201ENST00000474557 JAM3Q9BX67 310 aa4.68□□□□□ -1.66
HMGN1P10-201ENST00000474557 SLC39A2Q9NP94 309 aa4.68□□□□□ -1.66
HMGN1P10-201ENST00000474557 ARHGAP28Q9P2N2 729 aa4.68□□□□□ -1.66
HMGN1P10-201ENST00000474557 FAM184BQ9ULE4 1060 aa4.68□□□□□ -1.66
HMGN1P10-201ENST00000474557 ARNTLO00327 626 aa4.67□□□□□ -1.66
HMGN1P10-201ENST00000474557 LCP1P13796 627 aa4.67□□□□□ -1.66
HMGN1P10-201ENST00000474557 USP14P54578 494 aa4.67□□□□□ -1.66
HMGN1P10-201ENST00000474557 ELLP55199 621 aaPredicted RBP4.67□□□□□ -1.66
HMGN1P10-201ENST00000474557 CYP4F3Q08477 520 aa4.67□□□□□ -1.66
HMGN1P10-201ENST00000474557 RIN1Q13671 783 aa4.67□□□□□ -1.66
HMGN1P10-201ENST00000474557 EIF4HQ15056 248 aaKnown RBP4.67□□□□□ -1.66
HMGN1P10-201ENST00000474557 LRRC55Q6ZSA7 311 aa4.67□□□□□ -1.66
HMGN1P10-201ENST00000474557 OTOP3Q7RTS5 596 aa4.67□□□□□ -1.66
HMGN1P10-201ENST00000474557 ZNF366Q8N895 744 aa4.67□□□□□ -1.66
HMGN1P10-201ENST00000474557 SUPT20HQ8NEM7 779 aa4.67□□□□□ -1.66
HMGN1P10-201ENST00000474557 UHMK1Q8TAS1 419 aaKnown RBP4.67□□□□□ -1.66
HMGN1P10-201ENST00000474557 ARID3AQ99856 593 aa4.67□□□□□ -1.66
HMGN1P10-201ENST00000474557 R3HDMLQ9H3Y0 253 aa4.67□□□□□ -1.66
HMGN1P10-201ENST00000474557 RNF7Q9UBF6 113 aa4.67□□□□□ -1.66
HMGN1P10-201ENST00000474557 XDHP47989 1333 aa4.67□□□□□ -1.66
HMGN1P10-201ENST00000474557 GOLGA6L6A8MZA4 724 aa4.66□□□□□ -1.66
HMGN1P10-201ENST00000474557 LTFP02788 710 aa4.66□□□□□ -1.66
HMGN1P10-201ENST00000474557 PRR16Q569H4 304 aa4.66□□□□□ -1.66
HMGN1P10-201ENST00000474557 KREMEN2Q8NCW0 462 aa4.66□□□□□ -1.66
HMGN1P10-201ENST00000474557 SPATA5L1Q9BVQ7 753 aa4.66□□□□□ -1.66
HMGN1P10-201ENST00000474557 GNAT1P11488 350 aa4.65□□□□□ -1.67
HMGN1P10-201ENST00000474557 ADCY8P40145 1251 aa4.65□□□□□ -1.67
HMGN1P10-201ENST00000474557 CLK3P49761 638 aaKnown RBP4.65□□□□□ -1.67
HMGN1P10-201ENST00000474557 HGFACQ04756 655 aa4.65□□□□□ -1.67
HMGN1P10-201ENST00000474557 DBPQ10586 325 aaPredicted RBP4.65□□□□□ -1.67
HMGN1P10-201ENST00000474557 TIGD2Q4W5G0 525 aa4.65□□□□□ -1.67
HMGN1P10-201ENST00000474557 TRIM68Q6AZZ1 485 aa4.65□□□□□ -1.67
HMGN1P10-201ENST00000474557 SP5Q6BEB4 398 aaPredicted RBP4.65□□□□□ -1.67
HMGN1P10-201ENST00000474557 CCDC81Q6ZN84 652 aa4.65□□□□□ -1.67
HMGN1P10-201ENST00000474557 BEND2Q8NDZ0 799 aa4.65□□□□□ -1.67
HMGN1P10-201ENST00000474557 C16orf92Q96LL3 132 aa4.65□□□□□ -1.67
HMGN1P10-201ENST00000474557 SLC29A3Q9BZD2 475 aa4.65□□□□□ -1.67
HMGN1P10-201ENST00000474557 TESQ9UGI8 421 aaKnown RBP4.65□□□□□ -1.67
HMGN1P10-201ENST00000474557 DSEQ9UL01 958 aa4.65□□□□□ -1.67
HMGN1P10-201ENST00000474557 ZFPL1O95159 310 aa4.64□□□□□ -1.67
HMGN1P10-201ENST00000474557 LCE1EQ5T753 118 aa4.64□□□□□ -1.67
HMGN1P10-201ENST00000474557 NBPF6Q5VWK0 638 aa4.64□□□□□ -1.67
HMGN1P10-201ENST00000474557 RABGGTAQ92696 567 aa4.64□□□□□ -1.67
HMGN1P10-201ENST00000474557 NBPF4Q96M43 638 aa4.64□□□□□ -1.67
HMGN1P10-201ENST00000474557 AGO3Q9H9G7 860 aaKnown RBP4.64□□□□□ -1.67
HMGN1P10-201ENST00000474557 LRP2BPQ9P2M1 347 aa4.64□□□□□ -1.67
HMGN1P10-201ENST00000474557 CDC42EP3Q9UKI2 254 aa4.64□□□□□ -1.67
HMGN1P10-201ENST00000474557 COL4A3Q01955 1670 aa4.64□□□□□ -1.67
HMGN1P10-201ENST00000474557 A0A0G2JNJ9 132 aa4.63□□□□□ -1.67
HMGN1P10-201ENST00000474557 EPHA5P54756 1037 aa4.63□□□□□ -1.67
HMGN1P10-201ENST00000474557 ELAVL1Q15717 326 aaKnown RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms