RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 LINC00116Q8NCU8 138 aa8.76□□□□□ -1.01
CCDC93-208ENST00000474546 MORC4Q8TE76 937 aa8.76□□□□□ -1.01
CCDC93-208ENST00000474546 SEC14L1Q92503 715 aa8.76□□□□□ -1.01
CCDC93-208ENST00000474546 N4BP2L2Q92802 583 aaPredicted RBP8.76□□□□□ -1.01
CCDC93-208ENST00000474546 TATDN2Q93075 761 aa8.76□□□□□ -1.01
CCDC93-208ENST00000474546 ARL8AQ96BM9 186 aa8.76□□□□□ -1.01
CCDC93-208ENST00000474546 INPP4AQ96PE3 977 aaPredicted RBP8.76□□□□□ -1.01
CCDC93-208ENST00000474546 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.76□□□□□ -1.016e-6■□□□□ 9.2
CCDC93-208ENST00000474546 TMEM109Q9BVC6 243 aa8.76□□□□□ -1.01
CCDC93-208ENST00000474546 TMEM106CQ9BVX2 250 aa8.76□□□□□ -1.01
CCDC93-208ENST00000474546 SPZ1Q9BXG8 430 aa8.76□□□□□ -1.01
CCDC93-208ENST00000474546 METTL14Q9HCE5 456 aaKnown RBP8.76□□□□□ -1.01
CCDC93-208ENST00000474546 RBM12Q9NTZ6 932 aaKnown RBP8.76□□□□□ -1.01
CCDC93-208ENST00000474546 BARHL2Q9NY43 387 aa8.76□□□□□ -1.01
CCDC93-208ENST00000474546 NOP53Q9NZM5 478 aaKnown RBP8.76□□□□□ -1.01
CCDC93-208ENST00000474546 ARHGAP20Q9P2F6 1191 aa8.76□□□□□ -1.01
CCDC93-208ENST00000474546 SUCLA2Q9P2R7 463 aaPredicted RBP8.76□□□□□ -1.01
CCDC93-208ENST00000474546 CTNNAL1Q9UBT7 734 aa8.76□□□□□ -1.01
CCDC93-208ENST00000474546 TRIM10Q9UDY6 481 aa8.76□□□□□ -1.01
CCDC93-208ENST00000474546 MTRF1LQ9UGC7 380 aaKnown RBP8.76□□□□□ -1.01
CCDC93-208ENST00000474546 SLC12A6Q9UHW9 1150 aa8.76□□□□□ -1.01
CCDC93-208ENST00000474546 NFU1Q9UMS0 254 aa8.76□□□□□ -1.01
CCDC93-208ENST00000474546 RPL26L1Q9UNX3 145 aaKnown RBP8.76□□□□□ -1.01
CCDC93-208ENST00000474546 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.76□□□□□ -1.01
CCDC93-208ENST00000474546 COL4A3BPQ9Y5P4 624 aa8.76□□□□□ -1.01
CCDC93-208ENST00000474546 CAPN6Q9Y6Q1 641 aa8.76□□□□□ -1.01
CCDC93-208ENST00000474546 ROBO3Q96MS0 1386 aa8.75□□□□□ -1.01
CCDC93-208ENST00000474546 A0A0U1RQJ8 604 aa8.75□□□□□ -1.01
CCDC93-208ENST00000474546 LRRC53A6NM62 1247 aa8.75□□□□□ -1.01
CCDC93-208ENST00000474546 MINDY4BA8MYZ0 360 aa8.75□□□□□ -1.01
CCDC93-208ENST00000474546 NDC80O14777 642 aa8.75□□□□□ -1.01
CCDC93-208ENST00000474546 ZNF185O15231 689 aa8.75□□□□□ -1.01
CCDC93-208ENST00000474546 AGTP01019 485 aa8.75□□□□□ -1.01
CCDC93-208ENST00000474546 CCND1P24385 295 aa8.75□□□□□ -1.01
CCDC93-208ENST00000474546 PDE6CP51160 858 aa8.75□□□□□ -1.01
CCDC93-208ENST00000474546 GSTO1P78417 241 aa8.75□□□□□ -1.01
CCDC93-208ENST00000474546 ZRSR2Q15696 482 aaKnown RBP8.75□□□□□ -1.01
CCDC93-208ENST00000474546 ASIC2Q16515 512 aa8.75□□□□□ -1.01
CCDC93-208ENST00000474546 NAALADL2Q58DX5 795 aa8.75□□□□□ -1.01
CCDC93-208ENST00000474546 LRCH2Q5VUJ6 765 aa8.75□□□□□ -1.01
CCDC93-208ENST00000474546 KRT79Q5XKE5 535 aa8.75□□□□□ -1.01
CCDC93-208ENST00000474546 NFRKBQ6P4R8 1299 aa8.75□□□□□ -1.01
CCDC93-208ENST00000474546 PI16Q6UXB8 463 aa8.75□□□□□ -1.01
CCDC93-208ENST00000474546 Q7L0L9 218 aa8.75□□□□□ -1.01
CCDC93-208ENST00000474546 NEK8Q86SG6 692 aa8.75□□□□□ -1.01
CCDC93-208ENST00000474546 CCDC65Q8IXS2 484 aa8.75□□□□□ -1.01
CCDC93-208ENST00000474546 MYOCDQ8IZQ8 938 aa8.75□□□□□ -1.01
CCDC93-208ENST00000474546 TSEN2Q8NCE0 465 aaKnown RBP8.75□□□□□ -1.01
CCDC93-208ENST00000474546 IFT81Q8WYA0 676 aa8.75□□□□□ -1.01
CCDC93-208ENST00000474546 CUL5Q93034 780 aa8.75□□□□□ -1.01
CCDC93-208ENST00000474546 GRAMD1AQ96CP6 724 aa8.75□□□□□ -1.01
CCDC93-208ENST00000474546 SEC16BQ96JE7 1060 aa8.75□□□□□ -1.01
CCDC93-208ENST00000474546 ZFP91Q96JP5 570 aaPredicted RBP8.75□□□□□ -1.01
CCDC93-208ENST00000474546 RAB3IPQ96QF0 476 aaPredicted RBP8.75□□□□□ -1.01
CCDC93-208ENST00000474546 MTRQ99707 1265 aa8.75□□□□□ -1.01
CCDC93-208ENST00000474546 ROPN1BQ9BZX4 212 aaPredicted RBP8.75□□□□□ -1.01
CCDC93-208ENST00000474546 TRIM7Q9C029 511 aa8.75□□□□□ -1.01
CCDC93-208ENST00000474546 ZMYND12Q9H0C1 365 aa8.75□□□□□ -1.01
CCDC93-208ENST00000474546 ROPN1Q9HAT0 212 aaPredicted RBP8.75□□□□□ -1.01
CCDC93-208ENST00000474546 SEC63Q9UGP8 760 aaKnown RBP8.75□□□□□ -1.01
CCDC93-208ENST00000474546 TAOK2Q9UL54 1235 aa8.75□□□□□ -1.01
CCDC93-208ENST00000474546 ZNF652Q9Y2D9 606 aa8.75□□□□□ -1.01
CCDC93-208ENST00000474546 NOC2LQ9Y3T9 749 aaKnown RBP8.75□□□□□ -1.01
CCDC93-208ENST00000474546 SAMM50Q9Y512 469 aa8.75□□□□□ -1.01
CCDC93-208ENST00000474546 GTPBP10A4D1E9 387 aaKnown RBP8.74□□□□□ -1.01
CCDC93-208ENST00000474546 TRIM49BA6NDI0 452 aa8.74□□□□□ -1.01
CCDC93-208ENST00000474546 TSPY2A6NKD2 308 aa8.74□□□□□ -1.01
CCDC93-208ENST00000474546 CCT8L1PA6NM43 557 aa8.74□□□□□ -1.01
CCDC93-208ENST00000474546 MIF4GDA9UHW6 222 aaKnown RBP8.74□□□□□ -1.01
CCDC93-208ENST00000474546 FAM155AB1AL88 458 aaPredicted RBP8.74□□□□□ -1.01
CCDC93-208ENST00000474546 BHMG1C9JSJ3 638 aaPredicted RBP8.74□□□□□ -1.01
CCDC93-208ENST00000474546 M0R2N6 131 aa8.74□□□□□ -1.01
CCDC93-208ENST00000474546 PODXLO00592 558 aa8.74□□□□□ -1.01
CCDC93-208ENST00000474546 PPP1R12BO60237 982 aaPredicted RBP8.74□□□□□ -1.01
CCDC93-208ENST00000474546 HNRNPCL1O60812 293 aaKnown RBP8.74□□□□□ -1.01
CCDC93-208ENST00000474546 ZMYND10O75800 440 aa8.74□□□□□ -1.01
CCDC93-208ENST00000474546 WFS1O76024 890 aa8.74□□□□□ -1.01
CCDC93-208ENST00000474546 KIF4AO95239 1232 aa8.74□□□□□ -1.01
CCDC93-208ENST00000474546 ABL1P00519 1130 aa8.74□□□□□ -1.01
CCDC93-208ENST00000474546 KRT14P02533 472 aa8.74□□□□□ -1.01
CCDC93-208ENST00000474546 PLCG1P19174 1290 aa8.74□□□□□ -1.01
CCDC93-208ENST00000474546 RPL13P26373 211 aaKnown RBP8.74□□□□□ -1.01
CCDC93-208ENST00000474546 HSD17B3P37058 310 aa8.74□□□□□ -1.01
CCDC93-208ENST00000474546 PRKCIP41743 596 aa8.74□□□□□ -1.01
CCDC93-208ENST00000474546 MATR3P43243 847 aaKnown RBP eCLIP8.74□□□□□ -1.01
CCDC93-208ENST00000474546 SCTRP47872 440 aa8.74□□□□□ -1.01
CCDC93-208ENST00000474546 ATP1A2P50993 1020 aa8.74□□□□□ -1.01
CCDC93-208ENST00000474546 CLNS1AP54105 237 aaKnown RBP8.74□□□□□ -1.01
CCDC93-208ENST00000474546 CYP27A1Q02318 531 aa8.74□□□□□ -1.01
CCDC93-208ENST00000474546 KLHL30Q0D2K2 578 aa8.74□□□□□ -1.01
CCDC93-208ENST00000474546 ZNF34Q8IZ26 560 aa8.74□□□□□ -1.01
CCDC93-208ENST00000474546 RASGEF1CQ8N431 466 aa8.74□□□□□ -1.01
CCDC93-208ENST00000474546 CCDC82Q8N4S0 544 aa8.74□□□□□ -1.01
CCDC93-208ENST00000474546 CCDC63Q8NA47 563 aa8.74□□□□□ -1.01
CCDC93-208ENST00000474546 SCFD2Q8WU76 684 aa8.74□□□□□ -1.01
CCDC93-208ENST00000474546 BAP1Q92560 729 aa8.74□□□□□ -1.01
CCDC93-208ENST00000474546 LARP4BQ92615 738 aaKnown RBP8.74□□□□□ -1.01
CCDC93-208ENST00000474546 ARHGEF1Q92888 912 aaKnown RBP8.74□□□□□ -1.01
CCDC93-208ENST00000474546 RRP36Q96EU6 259 aaKnown RBP8.74□□□□□ -1.01
CCDC93-208ENST00000474546 GDAP1L1Q96MZ0 367 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms