RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 CHGBP05060 677 aa4.7□□□□□ -1.66
ECHDC1-213ENST00000474240 JMJD7P0C870 316 aa4.7□□□□□ -1.66
ECHDC1-213ENST00000474240 COL6A2P12110 1019 aa4.7□□□□□ -1.66
ECHDC1-213ENST00000474240 FAHP16930 419 aa4.7□□□□□ -1.66
ECHDC1-213ENST00000474240 PTPN1P18031 435 aaKnown RBP4.7□□□□□ -1.66
ECHDC1-213ENST00000474240 SOX5P35711 763 aa4.7□□□□□ -1.66
ECHDC1-213ENST00000474240 GYS2P54840 703 aa4.7□□□□□ -1.66
ECHDC1-213ENST00000474240 ICAM4Q14773 271 aa4.7□□□□□ -1.66
ECHDC1-213ENST00000474240 RGL3Q3MIN7 710 aa4.7□□□□□ -1.66
ECHDC1-213ENST00000474240 PAN2Q504Q3 1202 aaKnown RBP4.7□□□□□ -1.66
ECHDC1-213ENST00000474240 RNF187Q5TA31 235 aaPredicted RBP4.7□□□□□ -1.66
ECHDC1-213ENST00000474240 PIK3R6Q5UE93 754 aa4.7□□□□□ -1.66
ECHDC1-213ENST00000474240 VASNQ6EMK4 673 aa4.7□□□□□ -1.66
ECHDC1-213ENST00000474240 TEPPQ6URK8 271 aa4.7□□□□□ -1.66
ECHDC1-213ENST00000474240 CD300LDQ6UXZ3 194 aa4.7□□□□□ -1.66
ECHDC1-213ENST00000474240 CISD2Q8N5K1 135 aaKnown RBP4.7□□□□□ -1.66
ECHDC1-213ENST00000474240 LINC00482Q8N8I6 264 aa4.7□□□□□ -1.66
ECHDC1-213ENST00000474240 KYQ8NBH2 561 aa4.7□□□□□ -1.66
ECHDC1-213ENST00000474240 ARRDC4Q8NCT1 418 aa4.7□□□□□ -1.66
ECHDC1-213ENST00000474240 E2F7Q96AV8 911 aa4.7□□□□□ -1.66
ECHDC1-213ENST00000474240 ZBTB8AQ96BR9 441 aa4.7□□□□□ -1.66
ECHDC1-213ENST00000474240 CLIC6Q96NY7 704 aa4.7□□□□□ -1.66
ECHDC1-213ENST00000474240 WDR26Q9H7D7 661 aa4.7□□□□□ -1.66
ECHDC1-213ENST00000474240 KCNH7Q9NS40 1196 aa4.7□□□□□ -1.66
ECHDC1-213ENST00000474240 COQ6Q9Y2Z9 468 aa4.7□□□□□ -1.66
ECHDC1-213ENST00000474240 H7C1D1 291 aa4.69□□□□□ -1.66
ECHDC1-213ENST00000474240 CBX4O00257 560 aa4.69□□□□□ -1.66
ECHDC1-213ENST00000474240 MAN2B1O00754 1011 aa4.69□□□□□ -1.66
ECHDC1-213ENST00000474240 AMY2AP04746 511 aa4.69□□□□□ -1.66
ECHDC1-213ENST00000474240 C8BP07358 591 aa4.69□□□□□ -1.66
ECHDC1-213ENST00000474240 ENO2P09104 434 aaPredicted RBP4.69□□□□□ -1.66
ECHDC1-213ENST00000474240 CPEP16870 476 aa4.69□□□□□ -1.66
ECHDC1-213ENST00000474240 KCNA6P17658 529 aa4.69□□□□□ -1.66
ECHDC1-213ENST00000474240 KRT15P19012 456 aa4.69□□□□□ -1.66
ECHDC1-213ENST00000474240 AMY2BP19961 511 aa4.69□□□□□ -1.66
ECHDC1-213ENST00000474240 SDSP20132 328 aa4.69□□□□□ -1.66
ECHDC1-213ENST00000474240 MECP2P51608 486 aaKnown RBP4.69□□□□□ -1.66
ECHDC1-213ENST00000474240 NEK4P51957 841 aa4.69□□□□□ -1.66
ECHDC1-213ENST00000474240 SMAD4Q13485 552 aaKnown RBP4.69□□□□□ -1.66
ECHDC1-213ENST00000474240 SART3Q15020 963 aaKnown RBP4.69□□□□□ -1.66
ECHDC1-213ENST00000474240 ZNF174Q15697 407 aa4.69□□□□□ -1.66
ECHDC1-213ENST00000474240 BTBD8Q5XKL5 378 aa4.69□□□□□ -1.66
ECHDC1-213ENST00000474240 EGFLAMQ63HQ2 1017 aa4.69□□□□□ -1.66
ECHDC1-213ENST00000474240 CDCA2Q69YH5 1023 aaPredicted RBP4.69□□□□□ -1.66
ECHDC1-213ENST00000474240 TTLL7Q6ZT98 887 aa4.69□□□□□ -1.66
ECHDC1-213ENST00000474240 OSTM1Q86WC4 334 aa4.69□□□□□ -1.66
ECHDC1-213ENST00000474240 NME9Q86XW9 330 aa4.69□□□□□ -1.66
ECHDC1-213ENST00000474240 PTRH1Q86Y79 214 aaKnown RBP4.69□□□□□ -1.66
ECHDC1-213ENST00000474240 LGI4Q8N135 537 aa4.69□□□□□ -1.66
ECHDC1-213ENST00000474240 OR2W6PQ8NHA6 318 aa4.69□□□□□ -1.66
ECHDC1-213ENST00000474240 KLC2Q9H0B6 622 aa4.69□□□□□ -1.66
ECHDC1-213ENST00000474240 SMURF1Q9HCE7 757 aa4.69□□□□□ -1.66
ECHDC1-213ENST00000474240 ACSS2Q9NR19 701 aa4.69□□□□□ -1.66
ECHDC1-213ENST00000474240 DLL4Q9NR61 685 aa4.69□□□□□ -1.66
ECHDC1-213ENST00000474240 RIC8BQ9NVN3 520 aa4.69□□□□□ -1.66
ECHDC1-213ENST00000474240 B4GALT6Q9UBX8 382 aa4.69□□□□□ -1.66
ECHDC1-213ENST00000474240 CADPSQ9ULU8 1353 aa4.68□□□□□ -1.66
ECHDC1-213ENST00000474240 M0R2C6 588 aa4.68□□□□□ -1.66
ECHDC1-213ENST00000474240 PDE8AO60658 829 aa4.68□□□□□ -1.66
ECHDC1-213ENST00000474240 GLRX3O76003 335 aaKnown RBP4.68□□□□□ -1.66
ECHDC1-213ENST00000474240 LRG1P02750 347 aa4.68□□□□□ -1.66
ECHDC1-213ENST00000474240 CYP17A1P05093 508 aa4.68□□□□□ -1.66
ECHDC1-213ENST00000474240 SDHAP31040 664 aa4.68□□□□□ -1.66
ECHDC1-213ENST00000474240 FNTBP49356 437 aa4.68□□□□□ -1.66
ECHDC1-213ENST00000474240 SCNN1BP51168 640 aa4.68□□□□□ -1.66
ECHDC1-213ENST00000474240 JAM2P57087 298 aa4.68□□□□□ -1.66
ECHDC1-213ENST00000474240 IRF9Q00978 393 aa4.68□□□□□ -1.66
ECHDC1-213ENST00000474240 CR1LQ2VPA4 569 aa4.68□□□□□ -1.66
ECHDC1-213ENST00000474240 CC2D1AQ6P1N0 951 aaPredicted RBP4.68□□□□□ -1.66
ECHDC1-213ENST00000474240 PASD1Q8IV76 773 aa4.68□□□□□ -1.66
ECHDC1-213ENST00000474240 NOSTRINQ8IVI9 506 aa4.68□□□□□ -1.66
ECHDC1-213ENST00000474240 DHX37Q8IY37 1157 aaKnown RBP4.68□□□□□ -1.66
ECHDC1-213ENST00000474240 ZZZ3Q8IYH5 903 aa4.68□□□□□ -1.66
ECHDC1-213ENST00000474240 SH3RF2Q8TEC5 729 aa4.68□□□□□ -1.66
ECHDC1-213ENST00000474240 CHAC2Q8WUX2 184 aa4.68□□□□□ -1.66
ECHDC1-213ENST00000474240 CLEC4DQ8WXI8 215 aa4.68□□□□□ -1.66
ECHDC1-213ENST00000474240 CD244Q9BZW8 370 aa4.68□□□□□ -1.66
ECHDC1-213ENST00000474240 PCIF1Q9H4Z3 704 aa4.68□□□□□ -1.66
ECHDC1-213ENST00000474240 CAAP1Q9H8G2 361 aa4.68□□□□□ -1.66
ECHDC1-213ENST00000474240 C11orf21Q9P2W6 132 aa4.68□□□□□ -1.66
ECHDC1-213ENST00000474240 B3GALT1Q9Y5Z6 326 aa4.68□□□□□ -1.66
ECHDC1-213ENST00000474240 TCRBV5S4A2TA0A5A2 114 aa4.67□□□□□ -1.66
ECHDC1-213ENST00000474240 MYCLP1P12525 358 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-213ENST00000474240 STAT3P40763 770 aa4.67□□□□□ -1.66
ECHDC1-213ENST00000474240 STAT5AP42229 794 aa4.67□□□□□ -1.66
ECHDC1-213ENST00000474240 ITGA1P56199 1179 aa4.67□□□□□ -1.66
ECHDC1-213ENST00000474240 ZNF460Q14592 562 aa4.67□□□□□ -1.66
ECHDC1-213ENST00000474240 DHCR24Q15392 516 aa4.67□□□□□ -1.66
ECHDC1-213ENST00000474240 CT47A1Q5JQC4 288 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-213ENST00000474240 CD276Q5ZPR3 534 aa4.67□□□□□ -1.66
ECHDC1-213ENST00000474240 ZNF585AQ6P3V2 769 aa4.67□□□□□ -1.66
ECHDC1-213ENST00000474240 CNNM4Q6P4Q7 775 aa4.67□□□□□ -1.66
ECHDC1-213ENST00000474240 ABHD17CQ6PCB6 329 aa4.67□□□□□ -1.66
ECHDC1-213ENST00000474240 DPP8Q6V1X1 898 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-213ENST00000474240 C11orf74Q86VG3 221 aa4.67□□□□□ -1.66
ECHDC1-213ENST00000474240 IGDCC4Q8TDY8 1250 aa4.67□□□□□ -1.66
ECHDC1-213ENST00000474240 CDK5RAP1Q96SZ6 601 aaKnown RBP4.67□□□□□ -1.66
ECHDC1-213ENST00000474240 C11orf84Q9BUA3 381 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-213ENST00000474240 TARS2Q9BW92 718 aaKnown RBP4.67□□□□□ -1.66
ECHDC1-213ENST00000474240 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms