RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 LARGE1O95461 756 aa12.66□□□□□ -0.38
CKS1B-206ENST00000474215 FDPSP14324 419 aaKnown RBP12.66□□□□□ -0.38
CKS1B-206ENST00000474215 C8orf34Q49A92 452 aa12.66□□□□□ -0.38
CKS1B-206ENST00000474215 IER5Q5VY09 327 aa12.66□□□□□ -0.38
CKS1B-206ENST00000474215 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.66□□□□□ -0.38
CKS1B-206ENST00000474215 TMCO2Q7Z6W1 182 aaPredicted RBP12.66□□□□□ -0.38
CKS1B-206ENST00000474215 TRAPPC12Q8WVT3 735 aa12.66□□□□□ -0.38
CKS1B-206ENST00000474215 SLC5A5Q92911 643 aa12.66□□□□□ -0.38
CKS1B-206ENST00000474215 GTF3C6Q969F1 213 aa12.66□□□□□ -0.38
CKS1B-206ENST00000474215 GAS2L1Q99501 681 aaPredicted RBP12.66□□□□□ -0.38
CKS1B-206ENST00000474215 RAD9AQ99638 391 aa12.66□□□□□ -0.38
CKS1B-206ENST00000474215 GJB4Q9NTQ9 266 aa12.66□□□□□ -0.38
CKS1B-206ENST00000474215 SAMM50Q9Y512 469 aa12.66□□□□□ -0.38
CKS1B-206ENST00000474215 TET1Q8NFU7 2136 aa12.65□□□□□ -0.38
CKS1B-206ENST00000474215 CHD7Q9P2D1 2997 aa12.65□□□□□ -0.38
CKS1B-206ENST00000474215 CCDC194A0A1B0GVG4 234 aa12.65□□□□□ -0.38
CKS1B-206ENST00000474215 WDR64B1ANS9 1081 aa12.65□□□□□ -0.38
CKS1B-206ENST00000474215 GAS7O60861 476 aa12.65□□□□□ -0.38
CKS1B-206ENST00000474215 GJB5O95377 273 aa12.65□□□□□ -0.38
CKS1B-206ENST00000474215 TDP2O95551 362 aa12.65□□□□□ -0.38
CKS1B-206ENST00000474215 AMHP03971 560 aa12.65□□□□□ -0.38
CKS1B-206ENST00000474215 ATP4AP20648 1035 aa12.65□□□□□ -0.38
CKS1B-206ENST00000474215 KLRC1P26715 233 aa12.65□□□□□ -0.38
CKS1B-206ENST00000474215 MRPS6P82932 125 aaKnown RBP12.65□□□□□ -0.38
CKS1B-206ENST00000474215 TAP1Q03518 808 aa12.65□□□□□ -0.38
CKS1B-206ENST00000474215 MGAT3Q09327 533 aa12.65□□□□□ -0.38
CKS1B-206ENST00000474215 MKRN4PQ13434 485 aaPredicted RBP12.65□□□□□ -0.38
CKS1B-206ENST00000474215 INF2Q27J81 1249 aa12.65□□□□□ -0.38
CKS1B-206ENST00000474215 ZNF484Q5JVG2 852 aa12.65□□□□□ -0.38
CKS1B-206ENST00000474215 MTHFD1LQ6UB35 978 aa12.65□□□□□ -0.38
CKS1B-206ENST00000474215 MOXD1Q6UVY6 613 aa12.65□□□□□ -0.38
CKS1B-206ENST00000474215 CKAP2LQ8IYA6 745 aa12.65□□□□□ -0.38
CKS1B-206ENST00000474215 NME8Q8N427 588 aa12.65□□□□□ -0.38
CKS1B-206ENST00000474215 APBB2Q92870 758 aa12.65□□□□□ -0.38
CKS1B-206ENST00000474215 MBOAT7Q96N66 472 aa12.65□□□□□ -0.38
CKS1B-206ENST00000474215 TEKT3Q9BXF9 490 aa12.65□□□□□ -0.38
CKS1B-206ENST00000474215 IFIH1Q9BYX4 1025 aaKnown RBP12.65□□□□□ -0.38
CKS1B-206ENST00000474215 FAM49AQ9H0Q0 323 aaPredicted RBP12.65□□□□□ -0.38
CKS1B-206ENST00000474215 DISC1Q9NRI5 854 aa12.65□□□□□ -0.38
CKS1B-206ENST00000474215 A0A0C4DFX4 3053 aa12.65□□□□□ -0.38
CKS1B-206ENST00000474215 SMIM35A0A1B0GVV1 85 aa12.64□□□□□ -0.39
CKS1B-206ENST00000474215 ZBTB42B2RXF5 422 aa12.64□□□□□ -0.39
CKS1B-206ENST00000474215 PSMD10O75832 226 aa12.64□□□□□ -0.39
CKS1B-206ENST00000474215 GHRP10912 638 aa12.64□□□□□ -0.39
CKS1B-206ENST00000474215 SFNP31947 248 aa12.64□□□□□ -0.39
CKS1B-206ENST00000474215 ADGRE1Q14246 886 aa12.64□□□□□ -0.39
CKS1B-206ENST00000474215 LPIN1Q14693 890 aa12.64□□□□□ -0.39
CKS1B-206ENST00000474215 FBXO47Q5MNV8 452 aa12.64□□□□□ -0.39
CKS1B-206ENST00000474215 LRCH2Q5VUJ6 765 aa12.64□□□□□ -0.39
CKS1B-206ENST00000474215 OXER1Q8TDS5 423 aa12.64□□□□□ -0.39
CKS1B-206ENST00000474215 BBXQ8WY36 941 aaPredicted RBP12.64□□□□□ -0.39
CKS1B-206ENST00000474215 GABBR1Q9UBS5 961 aa12.64□□□□□ -0.39
CKS1B-206ENST00000474215 LIMCH1Q9UPQ0 1083 aa12.64□□□□□ -0.39
CKS1B-206ENST00000474215 CDY2AQ9Y6F7 541 aa12.64□□□□□ -0.39
CKS1B-206ENST00000474215 COL1A2P08123 1366 aa12.64□□□□□ -0.39
CKS1B-206ENST00000474215 M0QZ92 97 aa12.63□□□□□ -0.39
CKS1B-206ENST00000474215 ARHGEF15O94989 841 aa12.63□□□□□ -0.39
CKS1B-206ENST00000474215 IGFBP4P22692 258 aa12.63□□□□□ -0.39
CKS1B-206ENST00000474215 JAK3P52333 1124 aa12.63□□□□□ -0.39
CKS1B-206ENST00000474215 LETM2Q2VYF4 491 aa12.63□□□□□ -0.39
CKS1B-206ENST00000474215 PPP4R3AQ6IN85 833 aa12.63□□□□□ -0.39
CKS1B-206ENST00000474215 FAM117BQ6P1L5 589 aa12.63□□□□□ -0.39
CKS1B-206ENST00000474215 TRMT1LQ7Z2T5 733 aaKnown RBP12.63□□□□□ -0.39
CKS1B-206ENST00000474215 NEK8Q86SG6 692 aa12.63□□□□□ -0.39
CKS1B-206ENST00000474215 KIAA0319LQ8IZA0 1049 aa12.63□□□□□ -0.39
CKS1B-206ENST00000474215 MYOCDQ8IZQ8 938 aa12.63□□□□□ -0.39
CKS1B-206ENST00000474215 USP38Q8NB14 1042 aa12.63□□□□□ -0.39
CKS1B-206ENST00000474215 NSUN7Q8NE18 718 aaKnown RBP12.63□□□□□ -0.39
CKS1B-206ENST00000474215 ETNPPLQ8TBG4 499 aa12.63□□□□□ -0.39
CKS1B-206ENST00000474215 GJA10Q969M2 543 aa12.63□□□□□ -0.39
CKS1B-206ENST00000474215 TOP1MTQ969P6 601 aa12.63□□□□□ -0.39
CKS1B-206ENST00000474215 KIF2CQ99661 725 aa12.63□□□□□ -0.39
CKS1B-206ENST00000474215 CELF4Q9BZC1 486 aaKnown RBP12.63□□□□□ -0.39
CKS1B-206ENST00000474215 UNC45AQ9H3U1 944 aa12.63□□□□□ -0.39
CKS1B-206ENST00000474215 CERS4Q9HA82 394 aa12.63□□□□□ -0.39
CKS1B-206ENST00000474215 NRBP2Q9NSY0 501 aa12.63□□□□□ -0.39
CKS1B-206ENST00000474215 DDX25Q9UHL0 483 aaKnown RBP12.63□□□□□ -0.39
CKS1B-206ENST00000474215 INSL6Q9Y581 213 aa12.63□□□□□ -0.39
CKS1B-206ENST00000474215 SQORQ9Y6N5 450 aa12.63□□□□□ -0.39
CKS1B-206ENST00000474215 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.62□□□□□ -0.39
CKS1B-206ENST00000474215 LCHNA4D1U4 455 aa12.62□□□□□ -0.39
CKS1B-206ENST00000474215 CHMP2AO43633 222 aa12.62□□□□□ -0.39
CKS1B-206ENST00000474215 JAK2O60674 1132 aa12.62□□□□□ -0.39
CKS1B-206ENST00000474215 GCFC2P16383 781 aaKnown RBP12.62□□□□□ -0.39
CKS1B-206ENST00000474215 HTRA4P83105 476 aaPredicted RBP12.62□□□□□ -0.39
CKS1B-206ENST00000474215 TMEM62Q0P6H9 643 aa12.62□□□□□ -0.39
CKS1B-206ENST00000474215 B3GNT9Q6UX72 402 aa12.62□□□□□ -0.39
CKS1B-206ENST00000474215 TSHZ1Q6ZSZ6 1077 aa12.62□□□□□ -0.39
CKS1B-206ENST00000474215 PIK3AP1Q6ZUJ8 805 aa12.62□□□□□ -0.39
CKS1B-206ENST00000474215 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.62□□□□□ -0.39
CKS1B-206ENST00000474215 RDM1Q8NG50 284 aa12.62□□□□□ -0.39
CKS1B-206ENST00000474215 ARNTL2Q8WYA1 636 aa12.62□□□□□ -0.39
CKS1B-206ENST00000474215 FAM167AQ96KS9 214 aa12.62□□□□□ -0.39
CKS1B-206ENST00000474215 FAM20AQ96MK3 541 aa12.62□□□□□ -0.39
CKS1B-206ENST00000474215 NAP1L4Q99733 375 aaKnown RBP12.62□□□□□ -0.39
CKS1B-206ENST00000474215 AGO3Q9H9G7 860 aaKnown RBP12.62□□□□□ -0.39
CKS1B-206ENST00000474215 BRMS1Q9HCU9 246 aa12.62□□□□□ -0.39
CKS1B-206ENST00000474215 CEP131Q9UPN4 1083 aa12.62□□□□□ -0.39
CKS1B-206ENST00000474215 TRPV2Q9Y5S1 764 aa12.62□□□□□ -0.39
CKS1B-206ENST00000474215 TRANK1O15050 2925 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms