RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 ASIC4Q96FT7 647 aa23.15■■□□□ 1.3
APP-215ENST00000474136 TLE6Q9H808 572 aa23.15■■□□□ 1.3
APP-215ENST00000474136 PADI3Q9ULW8 664 aa23.15■■□□□ 1.3
APP-215ENST00000474136 GFRA3O60609 400 aa23.14■■□□□ 1.3
APP-215ENST00000474136 STAG3L1P0CL83 205 aa23.14■■□□□ 1.3
APP-215ENST00000474136 SCG2P13521 617 aa23.14■■□□□ 1.3
APP-215ENST00000474136 INSRRP14616 1297 aa23.14■■□□□ 1.3
APP-215ENST00000474136 ITGB5P18084 799 aa23.14■■□□□ 1.3
APP-215ENST00000474136 TRDNQ13061 729 aa23.14■■□□□ 1.3
APP-215ENST00000474136 GPRASP2Q96D09 838 aa23.14■■□□□ 1.3
APP-215ENST00000474136 PCYT2Q99447 389 aa23.14■■□□□ 1.3
APP-215ENST00000474136 FTHL17Q9BXU8 183 aa23.14■■□□□ 1.3
APP-215ENST00000474136 SMARCAD1Q9H4L7 1026 aa23.14■■□□□ 1.3
APP-215ENST00000474136 TRPV2Q9Y5S1 764 aa23.14■■□□□ 1.3
APP-215ENST00000474136 TAF6LQ9Y6J9 622 aa23.14■■□□□ 1.3
APP-215ENST00000474136 KIAA1671Q9BY89 1806 aa23.14■■□□□ 1.29
APP-215ENST00000474136 WTAPQ15007 396 aa23.13■■□□□ 1.29
APP-215ENST00000474136 IER5Q5VY09 327 aa23.13■■□□□ 1.29
APP-215ENST00000474136 MICAL1Q8TDZ2 1067 aa23.13■■□□□ 1.29
APP-215ENST00000474136 TRAPPC12Q8WVT3 735 aa23.13■■□□□ 1.29
APP-215ENST00000474136 TMX1Q9H3N1 280 aa23.13■■□□□ 1.29
APP-215ENST00000474136 ZFHX2Q9C0A1 2572 aaPredicted RBP23.13■■□□□ 1.29
APP-215ENST00000474136 ERICH2A1L162 156 aa23.12■■□□□ 1.29
APP-215ENST00000474136 PIK3CDO00329 1044 aa23.12■■□□□ 1.29
APP-215ENST00000474136 ATP8B4Q8TF62 1192 aa23.12■■□□□ 1.29
APP-215ENST00000474136 SUSD6Q92537 303 aa23.12■■□□□ 1.29
APP-215ENST00000474136 SQORQ9Y6N5 450 aa23.12■■□□□ 1.29
APP-215ENST00000474136 KMT2EQ8IZD2 1858 aa23.12■■□□□ 1.29
APP-215ENST00000474136 RRN3P2A6NIE6 340 aa23.11■■□□□ 1.29
APP-215ENST00000474136 CYP21A2P08686 494 aa23.11■■□□□ 1.29
APP-215ENST00000474136 AVPR2P30518 371 aa23.11■■□□□ 1.29
APP-215ENST00000474136 PAK2Q13177 524 aa23.11■■□□□ 1.29
APP-215ENST00000474136 TMEM266Q2M3C6 531 aa23.11■■□□□ 1.29
APP-215ENST00000474136 HCSTQ9UBK5 93 aa23.11■■□□□ 1.29
APP-215ENST00000474136 LRFN2Q9ULH4 789 aa23.11■■□□□ 1.29
APP-215ENST00000474136 IGSF9BQ9UPX0 1349 aa23.11■■□□□ 1.29
APP-215ENST00000474136 PDGFBP01127 241 aaPredicted RBP23.1■■□□□ 1.29
APP-215ENST00000474136 ERVFC1P60507 584 aa23.1■■□□□ 1.29
APP-215ENST00000474136 CATIPQ7Z7H3 387 aa23.1■■□□□ 1.29
APP-215ENST00000474136 ATOH1Q92858 354 aaPredicted RBP23.1■■□□□ 1.29
APP-215ENST00000474136 RRP36Q96EU6 259 aaKnown RBP23.1■■□□□ 1.29
APP-215ENST00000474136 CDHR1Q96JP9 859 aa23.1■■□□□ 1.29
APP-215ENST00000474136 MYL10Q9BUA6 226 aa23.1■■□□□ 1.29
APP-215ENST00000474136 CELF4Q9BZC1 486 aaKnown RBP23.1■■□□□ 1.29
APP-215ENST00000474136 UBIAD1Q9Y5Z9 338 aa23.1■■□□□ 1.29
APP-215ENST00000474136 M0QZ92 97 aa23.09■■□□□ 1.29
APP-215ENST00000474136 MGEA5O60502 916 aa23.09■■□□□ 1.29
APP-215ENST00000474136 ATF7P17544 494 aaPredicted RBP23.09■■□□□ 1.29
APP-215ENST00000474136 MTMR1Q13613 665 aa23.09■■□□□ 1.29
APP-215ENST00000474136 DUSP6Q16828 381 aa23.09■■□□□ 1.29
APP-215ENST00000474136 SPOUT1Q5T280 376 aaKnown RBP23.09■■□□□ 1.29
APP-215ENST00000474136 SPZ1Q9BXG8 430 aa23.09■■□□□ 1.29
APP-215ENST00000474136 ANO2Q9NQ90 1003 aa23.09■■□□□ 1.29
APP-215ENST00000474136 TLR9Q9NR96 1032 aa23.09■■□□□ 1.29
APP-215ENST00000474136 TRPC6Q9Y210 931 aa23.09■■□□□ 1.29
APP-215ENST00000474136 PLXNA4Q9HCM2 1894 aa23.09■■□□□ 1.29
APP-215ENST00000474136 SP100P23497 879 aaPredicted RBP23.08■■□□□ 1.29
APP-215ENST00000474136 ANTXR2P58335 489 aa23.08■■□□□ 1.29
APP-215ENST00000474136 PTH1RQ03431 593 aa23.08■■□□□ 1.29
APP-215ENST00000474136 UBE2SQ16763 222 aa23.08■■□□□ 1.29
APP-215ENST00000474136 PTPN21Q16825 1174 aa23.08■■□□□ 1.29
APP-215ENST00000474136 NEK1Q96PY6 1258 aa23.08■■□□□ 1.29
APP-215ENST00000474136 APOL5Q9BWW9 433 aa23.08■■□□□ 1.29
APP-215ENST00000474136 PCDHB12Q9Y5F1 795 aa23.08■■□□□ 1.29
APP-215ENST00000474136 PCDHA2Q9Y5H9 948 aa23.08■■□□□ 1.29
APP-215ENST00000474136 TBKBP1A7MCY6 615 aa23.08■■□□□ 1.28
APP-215ENST00000474136 H0Y858 1186 aa23.08■■□□□ 1.28
APP-215ENST00000474136 FGF18O76093 207 aa23.08■■□□□ 1.28
APP-215ENST00000474136 RPLP2P05387 115 aaKnown RBP23.08■■□□□ 1.28
APP-215ENST00000474136 SARSP49591 514 aaKnown RBP23.08■■□□□ 1.28
APP-215ENST00000474136 UBE3AQ05086 875 aa23.08■■□□□ 1.28
APP-215ENST00000474136 NFX1Q12986 1120 aaKnown RBP23.08■■□□□ 1.28
APP-215ENST00000474136 PLCB4Q15147 1175 aa23.08■■□□□ 1.28
APP-215ENST00000474136 FAM102BQ5T8I3 360 aa23.08■■□□□ 1.28
APP-215ENST00000474136 RALYLQ86SE5 291 aaKnown RBP23.08■■□□□ 1.28
APP-215ENST00000474136 IGDCC4Q8TDY8 1250 aa23.08■■□□□ 1.28
APP-215ENST00000474136 S1PR5Q9H228 398 aa23.08■■□□□ 1.28
APP-215ENST00000474136 JADE2Q9NQC1 790 aa23.08■■□□□ 1.28
APP-215ENST00000474136 PCDHB7Q9Y5E2 793 aa23.08■■□□□ 1.28
APP-215ENST00000474136 U3KPZ7 1027 aaPredicted RBP23.08■■□□□ 1.28
APP-215ENST00000474136 E7EWF7 191 aa23.07■■□□□ 1.28
APP-215ENST00000474136 PLEKHA8P1O95397 391 aa23.07■■□□□ 1.28
APP-215ENST00000474136 SEC24BO95487 1268 aa23.07■■□□□ 1.28
APP-215ENST00000474136 KRT76Q01546 638 aa23.07■■□□□ 1.28
APP-215ENST00000474136 APOBRQ0VD83 1088 aa23.07■■□□□ 1.28
APP-215ENST00000474136 SART3Q15020 963 aaKnown RBP23.07■■□□□ 1.28
APP-215ENST00000474136 CMTR1Q8N1G2 835 aaKnown RBP23.07■■□□□ 1.28
APP-215ENST00000474136 PSTPIP2Q9H939 334 aa23.07■■□□□ 1.28
APP-215ENST00000474136 CDHR5Q9HBB8 845 aa23.07■■□□□ 1.28
APP-215ENST00000474136 JPH1Q9HDC5 661 aaPredicted RBP23.07■■□□□ 1.28
APP-215ENST00000474136 SEC63Q9UGP8 760 aaKnown RBP23.07■■□□□ 1.28
APP-215ENST00000474136 GINS2Q9Y248 185 aa23.07■■□□□ 1.28
APP-215ENST00000474136 PTPRZ1P23471 2315 aaPredicted RBP23.06■■□□□ 1.28
APP-215ENST00000474136 KDM3AQ9Y4C1 1321 aa23.06■■□□□ 1.28
APP-215ENST00000474136 FSCN2O14926 492 aa23.06■■□□□ 1.28
APP-215ENST00000474136 THNSL1Q8IYQ7 743 aa23.06■■□□□ 1.28
APP-215ENST00000474136 COLGALT1Q8NBJ5 622 aa23.06■■□□□ 1.28
APP-215ENST00000474136 NCOA7Q8NI08 942 aa23.06■■□□□ 1.28
APP-215ENST00000474136 CDCA3Q99618 268 aaPredicted RBP23.06■■□□□ 1.28
APP-215ENST00000474136 AZI2Q9H6S1 392 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms