RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 DNAJB3Q8WWF6 145 aa23.15■■□□□ 1.3
SNX13-206ENST00000474067 GTF3C6Q969F1 213 aa23.15■■□□□ 1.3
SNX13-206ENST00000474067 PHF20Q9BVI0 1012 aa23.15■■□□□ 1.3
SNX13-206ENST00000474067 FTHL17Q9BXU8 183 aa23.15■■□□□ 1.3
SNX13-206ENST00000474067 ORC3Q9UBD5 711 aaPredicted RBP23.15■■□□□ 1.3
SNX13-206ENST00000474067 TET1Q8NFU7 2136 aa23.14■■□□□ 1.3
SNX13-206ENST00000474067 CYP3A7-CYP3A51PA0A087WV96 503 aa23.14■■□□□ 1.29
SNX13-206ENST00000474067 CYP3A7P24462 503 aa23.14■■□□□ 1.29
SNX13-206ENST00000474067 MARCH8Q5T0T0 291 aa23.14■■□□□ 1.29
SNX13-206ENST00000474067 TSHZ1Q6ZSZ6 1077 aa23.14■■□□□ 1.29
SNX13-206ENST00000474067 CCDC60Q8IWA6 550 aaPredicted RBP23.14■■□□□ 1.29
SNX13-206ENST00000474067 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.14■■□□□ 1.29
SNX13-206ENST00000474067 MYOCDQ8IZQ8 938 aa23.14■■□□□ 1.29
SNX13-206ENST00000474067 UPF2Q9HAU5 1272 aaKnown RBP23.14■■□□□ 1.29
SNX13-206ENST00000474067 NRBP2Q9NSY0 501 aa23.14■■□□□ 1.29
SNX13-206ENST00000474067 MAFBQ9Y5Q3 323 aaPredicted RBP23.14■■□□□ 1.29
SNX13-206ENST00000474067 TRPV2Q9Y5S1 764 aa23.14■■□□□ 1.29
SNX13-206ENST00000474067 MAGEB2O15479 319 aa23.13■■□□□ 1.29
SNX13-206ENST00000474067 DKC1O60832 514 aaKnown RBP eCLIP23.13■■□□□ 1.29
SNX13-206ENST00000474067 IGFBP4P22692 258 aa23.13■■□□□ 1.29
SNX13-206ENST00000474067 TMOD1P28289 359 aa23.13■■□□□ 1.29
SNX13-206ENST00000474067 DEFB103AP81534 67 aa23.13■■□□□ 1.29
SNX13-206ENST00000474067 MTHFD1LQ6UB35 978 aa23.13■■□□□ 1.29
SNX13-206ENST00000474067 RUFY4Q6ZNE9 571 aa23.13■■□□□ 1.29
SNX13-206ENST00000474067 NEK8Q86SG6 692 aa23.13■■□□□ 1.29
SNX13-206ENST00000474067 SAMD11Q96NU1 681 aa23.13■■□□□ 1.29
SNX13-206ENST00000474067 FAM49AQ9H0Q0 323 aaPredicted RBP23.13■■□□□ 1.29
SNX13-206ENST00000474067 DISC1Q9NRI5 854 aa23.13■■□□□ 1.29
SNX13-206ENST00000474067 CDY2AQ9Y6F7 541 aa23.13■■□□□ 1.29
SNX13-206ENST00000474067 M0R2N6 131 aa23.12■■□□□ 1.29
SNX13-206ENST00000474067 MSH4O15457 936 aa23.12■■□□□ 1.29
SNX13-206ENST00000474067 KLRC1P26715 233 aa23.12■■□□□ 1.29
SNX13-206ENST00000474067 MGAT3Q09327 533 aa23.12■■□□□ 1.29
SNX13-206ENST00000474067 SLC5A5Q92911 643 aa23.12■■□□□ 1.29
SNX13-206ENST00000474067 LENG9Q96B70 501 aa23.12■■□□□ 1.29
SNX13-206ENST00000474067 DDX25Q9UHL0 483 aaKnown RBP23.12■■□□□ 1.29
SNX13-206ENST00000474067 KDM3AQ9Y4C1 1321 aa23.11■■□□□ 1.29
SNX13-206ENST00000474067 MARCH6O60337 910 aa23.11■■□□□ 1.29
SNX13-206ENST00000474067 CHRNA1P02708 482 aa23.11■■□□□ 1.29
SNX13-206ENST00000474067 GHRP10912 638 aa23.11■■□□□ 1.29
SNX13-206ENST00000474067 MYOGP15173 224 aa23.11■■□□□ 1.29
SNX13-206ENST00000474067 KRT2P35908 639 aa23.11■■□□□ 1.29
SNX13-206ENST00000474067 TAP1Q03518 808 aa23.11■■□□□ 1.29
SNX13-206ENST00000474067 PPP4R3AQ6IN85 833 aa23.11■■□□□ 1.29
SNX13-206ENST00000474067 FAM20AQ96MK3 541 aa23.11■■□□□ 1.29
SNX13-206ENST00000474067 TGS1Q96RS0 853 aaKnown RBP23.11■■□□□ 1.29
SNX13-206ENST00000474067 YME1L1Q96TA2 773 aa23.11■■□□□ 1.29
SNX13-206ENST00000474067 GABBR1Q9UBS5 961 aa23.11■■□□□ 1.29
SNX13-206ENST00000474067 IGSF9BQ9UPX0 1349 aa23.1■■□□□ 1.29
SNX13-206ENST00000474067 MICAL3Q7RTP6 2002 aa23.1■■□□□ 1.29
SNX13-206ENST00000474067 TBX3O15119 743 aa23.1■■□□□ 1.29
SNX13-206ENST00000474067 ME3Q16798 604 aa23.1■■□□□ 1.29
SNX13-206ENST00000474067 LETM2Q2VYF4 491 aa23.1■■□□□ 1.29
SNX13-206ENST00000474067 FBXO47Q5MNV8 452 aa23.1■■□□□ 1.29
SNX13-206ENST00000474067 MIER3Q7Z3K6 550 aa23.1■■□□□ 1.29
SNX13-206ENST00000474067 TOP1MTQ969P6 601 aa23.1■■□□□ 1.29
SNX13-206ENST00000474067 ZSCAN31Q96LW9 406 aaPredicted RBP23.1■■□□□ 1.29
SNX13-206ENST00000474067 CELF4Q9BZC1 486 aaKnown RBP23.1■■□□□ 1.29
SNX13-206ENST00000474067 KCNJ14Q9UNX9 436 aa23.1■■□□□ 1.29
SNX13-206ENST00000474067 LIMCH1Q9UPQ0 1083 aa23.1■■□□□ 1.29
SNX13-206ENST00000474067 MYH9P35579 1960 aaKnown RBP23.1■■□□□ 1.29
SNX13-206ENST00000474067 BAG4O95429 457 aaKnown RBP23.09■■□□□ 1.29
SNX13-206ENST00000474067 PAK2Q13177 524 aa23.09■■□□□ 1.29
SNX13-206ENST00000474067 INF2Q27J81 1249 aa23.09■■□□□ 1.29
SNX13-206ENST00000474067 MBOAT7Q96N66 472 aa23.09■■□□□ 1.29
SNX13-206ENST00000474067 AIFM3Q96NN9 605 aa23.09■■□□□ 1.29
SNX13-206ENST00000474067 MAP7D2Q96T17 732 aa23.09■■□□□ 1.29
SNX13-206ENST00000474067 LMCD1Q9NZU5 365 aa23.09■■□□□ 1.29
SNX13-206ENST00000474067 RWDD3Q9Y3V2 267 aa23.09■■□□□ 1.29
SNX13-206ENST00000474067 OATP04181 439 aa23.08■■□□□ 1.29
SNX13-206ENST00000474067 POU3F3P20264 500 aaPredicted RBP23.08■■□□□ 1.29
SNX13-206ENST00000474067 HTRA4P83105 476 aaPredicted RBP23.08■■□□□ 1.29
SNX13-206ENST00000474067 CDC42EP1Q00587 391 aa23.08■■□□□ 1.29
SNX13-206ENST00000474067 MKRN4PQ13434 485 aaPredicted RBP23.08■■□□□ 1.29
SNX13-206ENST00000474067 LPIN1Q14693 890 aa23.08■■□□□ 1.29
SNX13-206ENST00000474067 SAFBQ15424 915 aaKnown RBP eCLIP23.08■■□□□ 1.29
SNX13-206ENST00000474067 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.08■■□□□ 1.29
SNX13-206ENST00000474067 EXOC8Q8IYI6 725 aa23.08■■□□□ 1.29
SNX13-206ENST00000474067 SLFN12Q8IYM2 578 aa23.08■■□□□ 1.29
SNX13-206ENST00000474067 ARNTL2Q8WYA1 636 aa23.08■■□□□ 1.29
SNX13-206ENST00000474067 LLPHQ9BRT6 129 aaKnown RBP23.08■■□□□ 1.29
SNX13-206ENST00000474067 ADAMTS3O15072 1205 aa23.07■■□□□ 1.28
SNX13-206ENST00000474067 CHMP2AO43633 222 aa23.07■■□□□ 1.28
SNX13-206ENST00000474067 PSMD10O75832 226 aa23.07■■□□□ 1.28
SNX13-206ENST00000474067 TDP2O95551 362 aa23.07■■□□□ 1.28
SNX13-206ENST00000474067 STAG3L1P0CL83 205 aa23.07■■□□□ 1.28
SNX13-206ENST00000474067 NPY5RQ15761 445 aa23.07■■□□□ 1.28
SNX13-206ENST00000474067 FAM117BQ6P1L5 589 aa23.07■■□□□ 1.28
SNX13-206ENST00000474067 SYMPKQ92797 1274 aaKnown RBP23.07■■□□□ 1.28
SNX13-206ENST00000474067 JPH2Q9BR39 696 aaPredicted RBP23.07■■□□□ 1.28
SNX13-206ENST00000474067 SH2B1Q9NRF2 756 aaPredicted RBP23.07■■□□□ 1.28
SNX13-206ENST00000474067 GPR182O15218 404 aa23.06■■□□□ 1.28
SNX13-206ENST00000474067 CCNT1O60563 726 aaKnown RBP23.06■■□□□ 1.28
SNX13-206ENST00000474067 ERVK-21P61565 698 aa23.06■■□□□ 1.28
SNX13-206ENST00000474067 HMGN5P82970 282 aaKnown RBP23.06■■□□□ 1.28
SNX13-206ENST00000474067 PIK3AP1Q6ZUJ8 805 aa23.06■■□□□ 1.28
SNX13-206ENST00000474067 METTL13Q8N6R0 699 aa23.06■■□□□ 1.28
SNX13-206ENST00000474067 NECAB1Q8N987 351 aa23.06■■□□□ 1.28
SNX13-206ENST00000474067 NSUN7Q8NE18 718 aaKnown RBP23.06■■□□□ 1.28
SNX13-206ENST00000474067 TRAPPC12Q8WVT3 735 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 886.6 ms