RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 ATP2B1P20020 1258 aa16.02■□□□□ 0.16
VAMP4-203ENST00000474047 KCNJ6P48051 423 aa16.02■□□□□ 0.16
VAMP4-203ENST00000474047 ZNF697Q5TEC3 545 aa16.02■□□□□ 0.16
VAMP4-203ENST00000474047 RASIP1Q5U651 963 aa16.02■□□□□ 0.16
VAMP4-203ENST00000474047 RUFY4Q6ZNE9 571 aa16.02■□□□□ 0.16
VAMP4-203ENST00000474047 RDM1Q8NG50 284 aa16.02■□□□□ 0.16
VAMP4-203ENST00000474047 ETNPPLQ8TBG4 499 aa16.02■□□□□ 0.16
VAMP4-203ENST00000474047 DNAJB3Q8WWF6 145 aa16.02■□□□□ 0.16
VAMP4-203ENST00000474047 BBXQ8WY36 941 aaPredicted RBP16.02■□□□□ 0.16
VAMP4-203ENST00000474047 TNFRSF25Q93038 417 aa16.02■□□□□ 0.16
VAMP4-203ENST00000474047 FAM167AQ96KS9 214 aa16.02■□□□□ 0.16
VAMP4-203ENST00000474047 MBLAC1A4D2B0 266 aaPredicted RBP16.02■□□□□ 0.15
VAMP4-203ENST00000474047 TBX3O15119 743 aa16.02■□□□□ 0.15
VAMP4-203ENST00000474047 KLRC1P26715 233 aa16.02■□□□□ 0.15
VAMP4-203ENST00000474047 IKBKEQ14164 716 aa16.02■□□□□ 0.15
VAMP4-203ENST00000474047 MARCH8Q5T0T0 291 aa16.02■□□□□ 0.15
VAMP4-203ENST00000474047 CNKSR3Q6P9H4 555 aa16.02■□□□□ 0.15
VAMP4-203ENST00000474047 SLFN12Q8IYM2 578 aa16.02■□□□□ 0.15
VAMP4-203ENST00000474047 FBXO18Q8NFZ0 1043 aa16.02■□□□□ 0.15
VAMP4-203ENST00000474047 MSRAQ9UJ68 235 aa16.02■□□□□ 0.15
VAMP4-203ENST00000474047 CEP131Q9UPN4 1083 aa16.02■□□□□ 0.15
VAMP4-203ENST00000474047 COL1A2P08123 1366 aa16.01■□□□□ 0.15
VAMP4-203ENST00000474047 GRXCR1A8MXD5 290 aa16.01■□□□□ 0.15
VAMP4-203ENST00000474047 BAIAP3O94812 1187 aa16.01■□□□□ 0.15
VAMP4-203ENST00000474047 CD2BP2O95400 341 aaKnown RBP16.01■□□□□ 0.15
VAMP4-203ENST00000474047 CXCL10P02778 98 aa16.01■□□□□ 0.15
VAMP4-203ENST00000474047 ATP2A2P16615 1042 aaKnown RBP16.01■□□□□ 0.15
VAMP4-203ENST00000474047 IER5Q5VY09 327 aa16.01■□□□□ 0.15
VAMP4-203ENST00000474047 MTHFD1LQ6UB35 978 aa16.01■□□□□ 0.15
VAMP4-203ENST00000474047 POTEDQ86YR6 584 aa16.01■□□□□ 0.15
VAMP4-203ENST00000474047 VWCEQ96DN2 955 aa16.01■□□□□ 0.15
VAMP4-203ENST00000474047 ZBTB10Q96DT7 871 aa16.01■□□□□ 0.15
VAMP4-203ENST00000474047 FOXP1Q9H334 677 aaPredicted RBP16.01■□□□□ 0.15
VAMP4-203ENST00000474047 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.01■□□□□ 0.15
VAMP4-203ENST00000474047 PCDHA2Q9Y5H9 948 aa16.01■□□□□ 0.15
VAMP4-203ENST00000474047 RAB30Q15771 203 aa16■□□□□ 0.15
VAMP4-203ENST00000474047 CALCRLQ16602 461 aa16■□□□□ 0.15
VAMP4-203ENST00000474047 FAM109BQ6ICB4 259 aaPredicted RBP16■□□□□ 0.15
VAMP4-203ENST00000474047 Q7L0L9 218 aa16■□□□□ 0.15
VAMP4-203ENST00000474047 RPAINQ86UA6 219 aa16■□□□□ 0.15
VAMP4-203ENST00000474047 SEPT8Q92599 483 aa16■□□□□ 0.15
VAMP4-203ENST00000474047 FAM161BQ96MY7 647 aa16■□□□□ 0.15
VAMP4-203ENST00000474047 KCNMB3Q9NPA1 279 aa16■□□□□ 0.15
VAMP4-203ENST00000474047 SMC3Q9UQE7 1217 aa16■□□□□ 0.15
VAMP4-203ENST00000474047 ABHD14A-ACY1A0A1B0GW23 586 aa15.99■□□□□ 0.15
VAMP4-203ENST00000474047 NEMFO60524 1076 aa15.99■□□□□ 0.15
VAMP4-203ENST00000474047 EFCAB14O75071 495 aa15.99■□□□□ 0.15
VAMP4-203ENST00000474047 OATP04181 439 aa15.99■□□□□ 0.15
VAMP4-203ENST00000474047 ATP4AP20648 1035 aa15.99■□□□□ 0.15
VAMP4-203ENST00000474047 DNAJB2P25686 324 aa15.99■□□□□ 0.15
VAMP4-203ENST00000474047 PRKCEQ02156 737 aa15.99■□□□□ 0.15
VAMP4-203ENST00000474047 MBTPS1Q14703 1052 aa15.99■□□□□ 0.15
VAMP4-203ENST00000474047 GPNMBQ14956 572 aa15.99■□□□□ 0.15
VAMP4-203ENST00000474047 MCTP1Q6DN14 999 aa15.99■□□□□ 0.15
VAMP4-203ENST00000474047 TRAF7Q6Q0C0 670 aa15.99■□□□□ 0.15
VAMP4-203ENST00000474047 NME8Q8N427 588 aa15.99■□□□□ 0.15
VAMP4-203ENST00000474047 METTL13Q8N6R0 699 aa15.99■□□□□ 0.15
VAMP4-203ENST00000474047 SLC9A7Q96T83 725 aa15.99■□□□□ 0.15
VAMP4-203ENST00000474047 NOL7Q9UMY1 257 aaKnown RBP15.99■□□□□ 0.15
VAMP4-203ENST00000474047 IGSF9BQ9UPX0 1349 aa15.99■□□□□ 0.15
VAMP4-203ENST00000474047 SMIM35A0A1B0GVV1 85 aa15.99■□□□□ 0.15
VAMP4-203ENST00000474047 KIF28PB7ZC32 967 aa15.99■□□□□ 0.15
VAMP4-203ENST00000474047 H3BQV1 296 aa15.99■□□□□ 0.15
VAMP4-203ENST00000474047 DKC1O60832 514 aaKnown RBP eCLIP15.99■□□□□ 0.15
VAMP4-203ENST00000474047 MCM7P33993 719 aa15.99■□□□□ 0.15
VAMP4-203ENST00000474047 MRPS6P82932 125 aaKnown RBP15.99■□□□□ 0.15
VAMP4-203ENST00000474047 PPP2R5CQ13362 524 aa15.99■□□□□ 0.15
VAMP4-203ENST00000474047 FAM26DQ5JW98 314 aa15.99■□□□□ 0.15
VAMP4-203ENST00000474047 NCAPH2Q6IBW4 605 aa15.99■□□□□ 0.15
VAMP4-203ENST00000474047 DBF4BQ8NFT6 615 aa15.99■□□□□ 0.15
VAMP4-203ENST00000474047 TIFAQ96CG3 184 aa15.99■□□□□ 0.15
VAMP4-203ENST00000474047 ZBED2Q9BTP6 218 aa15.99■□□□□ 0.15
VAMP4-203ENST00000474047 PCDHA12Q9UN75 941 aa15.99■□□□□ 0.15
VAMP4-203ENST00000474047 CDY2AQ9Y6F7 541 aa15.99■□□□□ 0.15
VAMP4-203ENST00000474047 TET1Q8NFU7 2136 aa15.98■□□□□ 0.15
VAMP4-203ENST00000474047 DDX11L8A8MPP1 907 aa15.98■□□□□ 0.15
VAMP4-203ENST00000474047 CHRNA1P02708 482 aa15.98■□□□□ 0.15
VAMP4-203ENST00000474047 GJB2P29033 226 aa15.98■□□□□ 0.15
VAMP4-203ENST00000474047 TMEM62Q0P6H9 643 aa15.98■□□□□ 0.15
VAMP4-203ENST00000474047 UGCGQ16739 394 aa15.98■□□□□ 0.15
VAMP4-203ENST00000474047 NOSTRINQ8IVI9 506 aa15.98■□□□□ 0.15
VAMP4-203ENST00000474047 BANK1Q8NDB2 785 aa15.98■□□□□ 0.15
VAMP4-203ENST00000474047 PHOSPHO2Q8TCD6 241 aa15.98■□□□□ 0.15
VAMP4-203ENST00000474047 HAS1Q92839 578 aa15.98■□□□□ 0.15
VAMP4-203ENST00000474047 PBX4Q9BYU1 374 aa15.98■□□□□ 0.15
VAMP4-203ENST00000474047 SEPT9Q9UHD8 586 aaPredicted RBP15.98■□□□□ 0.15
VAMP4-203ENST00000474047 MAGEB2O15479 319 aa15.97■□□□□ 0.15
VAMP4-203ENST00000474047 ZNF862O60290 1169 aa15.97■□□□□ 0.15
VAMP4-203ENST00000474047 GHRP10912 638 aa15.97■□□□□ 0.15
VAMP4-203ENST00000474047 TMOD1P28289 359 aa15.97■□□□□ 0.15
VAMP4-203ENST00000474047 PBX2P40425 430 aa15.97■□□□□ 0.15
VAMP4-203ENST00000474047 TXKP42681 527 aa15.97■□□□□ 0.15
VAMP4-203ENST00000474047 RABGGTBP53611 331 aa15.97■□□□□ 0.15
VAMP4-203ENST00000474047 PSMC5P62195 406 aa15.97■□□□□ 0.15
VAMP4-203ENST00000474047 PLEKHG4Q58EX7 1191 aa15.97■□□□□ 0.15
VAMP4-203ENST00000474047 IFIH1Q9BYX4 1025 aaKnown RBP15.97■□□□□ 0.15
VAMP4-203ENST00000474047 VAV3Q9UKW4 847 aa15.97■□□□□ 0.15
VAMP4-203ENST00000474047 GINS2Q9Y248 185 aa15.97■□□□□ 0.15
VAMP4-203ENST00000474047 TRPV2Q9Y5S1 764 aa15.97■□□□□ 0.15
VAMP4-203ENST00000474047 EML1O00423 815 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms