RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 MRGPREQ86SM8 312 aa3.64□□□□□ -1.83
CCDC39-203ENST00000473854 ZNF227Q86WZ6 799 aa3.64□□□□□ -1.83
CCDC39-203ENST00000473854 SLC25A43Q8WUT9 341 aaPredicted RBP3.64□□□□□ -1.83
CCDC39-203ENST00000473854 MIEF2Q96C03 454 aa3.64□□□□□ -1.83
CCDC39-203ENST00000473854 BBC3Q96PG8 261 aaPredicted RBP3.64□□□□□ -1.83
CCDC39-203ENST00000473854 CDIP1Q9H305 208 aa3.64□□□□□ -1.83
CCDC39-203ENST00000473854 ARHGAP28Q9P2N2 729 aa3.64□□□□□ -1.83
CCDC39-203ENST00000473854 DSEQ9UL01 958 aa3.64□□□□□ -1.83
CCDC39-203ENST00000473854 EFR3BQ9Y2G0 817 aa3.64□□□□□ -1.83
CCDC39-203ENST00000473854 RPS6KA4O75676 772 aa3.63□□□□□ -1.83
CCDC39-203ENST00000473854 KCNQ1P51787 676 aa3.63□□□□□ -1.83
CCDC39-203ENST00000473854 DBPQ10586 325 aaPredicted RBP3.63□□□□□ -1.83
CCDC39-203ENST00000473854 EIF4HQ15056 248 aaKnown RBP3.63□□□□□ -1.83
CCDC39-203ENST00000473854 PCOLCEQ15113 449 aa3.63□□□□□ -1.83
CCDC39-203ENST00000473854 TBR1Q16650 682 aa3.63□□□□□ -1.83
CCDC39-203ENST00000473854 SV2CQ496J9 727 aa3.63□□□□□ -1.83
CCDC39-203ENST00000473854 GPR135Q8IZ08 494 aa3.63□□□□□ -1.83
CCDC39-203ENST00000473854 RTKN2Q8IZC4 609 aa3.63□□□□□ -1.83
CCDC39-203ENST00000473854 NELL1Q92832 810 aa3.63□□□□□ -1.83
CCDC39-203ENST00000473854 JAM3Q9BX67 310 aa3.63□□□□□ -1.83
CCDC39-203ENST00000473854 KIAA1683Q9H0B3 1180 aa3.63□□□□□ -1.83
CCDC39-203ENST00000473854 ZNF37AP17032 561 aaPredicted RBP3.62□□□□□ -1.83
CCDC39-203ENST00000473854 GRK2P25098 689 aa3.62□□□□□ -1.83
CCDC39-203ENST00000473854 GJA4P35212 333 aa3.62□□□□□ -1.83
CCDC39-203ENST00000473854 GRK3P35626 688 aa3.62□□□□□ -1.83
CCDC39-203ENST00000473854 MRE11P49959 708 aa3.62□□□□□ -1.83
CCDC39-203ENST00000473854 SLC25A3Q00325 362 aa3.62□□□□□ -1.83
CCDC39-203ENST00000473854 TAP1Q03518 808 aa3.62□□□□□ -1.83
CCDC39-203ENST00000473854 MAP4K2Q12851 820 aa3.62□□□□□ -1.83
CCDC39-203ENST00000473854 TOB2Q14106 344 aaPredicted RBP3.62□□□□□ -1.83
CCDC39-203ENST00000473854 PRSS53Q2L4Q9 553 aa3.62□□□□□ -1.83
CCDC39-203ENST00000473854 KIZQ2M2Z5 673 aa3.62□□□□□ -1.83
CCDC39-203ENST00000473854 ZNF394Q53GI3 561 aa3.62□□□□□ -1.83
CCDC39-203ENST00000473854 SLC35F1Q5T1Q4 408 aa3.62□□□□□ -1.83
CCDC39-203ENST00000473854 SPTY2D1Q68D10 685 aaPredicted RBP3.62□□□□□ -1.83
CCDC39-203ENST00000473854 TRIM68Q6AZZ1 485 aa3.62□□□□□ -1.83
CCDC39-203ENST00000473854 ERICH6Q7L0X2 663 aa3.62□□□□□ -1.83
CCDC39-203ENST00000473854 GSPT2Q8IYD1 628 aaKnown RBP3.62□□□□□ -1.83
CCDC39-203ENST00000473854 TMEM145Q8NBT3 493 aa3.62□□□□□ -1.83
CCDC39-203ENST00000473854 GPR150Q8NGU9 434 aa3.62□□□□□ -1.83
CCDC39-203ENST00000473854 WDR48Q8TAF3 677 aa3.62□□□□□ -1.83
CCDC39-203ENST00000473854 RASGRP4Q8TDF6 673 aa3.62□□□□□ -1.83
CCDC39-203ENST00000473854 NTN5Q8WTR8 489 aaPredicted RBP3.62□□□□□ -1.83
CCDC39-203ENST00000473854 CPLX3Q8WVH0 158 aa3.62□□□□□ -1.83
CCDC39-203ENST00000473854 KCTD13Q8WZ19 329 aa3.62□□□□□ -1.83
CCDC39-203ENST00000473854 LPPQ93052 612 aa3.62□□□□□ -1.83
CCDC39-203ENST00000473854 TMEM176AQ96HP8 235 aa3.62□□□□□ -1.83
CCDC39-203ENST00000473854 BCL2L13Q9BXK5 485 aa3.62□□□□□ -1.83
CCDC39-203ENST00000473854 TOR3AQ9H497 397 aa3.62□□□□□ -1.83
CCDC39-203ENST00000473854 SLC39A2Q9NP94 309 aa3.62□□□□□ -1.83
CCDC39-203ENST00000473854 B3GALT2O43825 422 aa3.61□□□□□ -1.83
CCDC39-203ENST00000473854 LTFP02788 710 aa3.61□□□□□ -1.83
CCDC39-203ENST00000473854 PDE6AP16499 860 aa3.61□□□□□ -1.83
CCDC39-203ENST00000473854 SMAD3P84022 425 aaKnown RBP3.61□□□□□ -1.83
CCDC39-203ENST00000473854 HGFACQ04756 655 aa3.61□□□□□ -1.83
CCDC39-203ENST00000473854 OTOP2Q7RTS6 562 aa3.61□□□□□ -1.83
CCDC39-203ENST00000473854 ZNF654Q8IZM8 581 aa3.61□□□□□ -1.83
CCDC39-203ENST00000473854 NLGN4XQ8N0W4 816 aa3.61□□□□□ -1.83
CCDC39-203ENST00000473854 RABGGTAQ92696 567 aa3.61□□□□□ -1.83
CCDC39-203ENST00000473854 SHDQ96IW2 340 aa3.61□□□□□ -1.83
CCDC39-203ENST00000473854 DDX41Q9UJV9 622 aaKnown RBP3.61□□□□□ -1.83
CCDC39-203ENST00000473854 STRIP2Q9ULQ0 834 aa3.61□□□□□ -1.83
CCDC39-203ENST00000473854 PCDHGB7Q9Y5F8 929 aa3.61□□□□□ -1.83
CCDC39-203ENST00000473854 COX11Q9Y6N1 276 aa3.61□□□□□ -1.83
CCDC39-203ENST00000473854 A0A0G2JNJ9 132 aa3.6□□□□□ -1.83
CCDC39-203ENST00000473854 A0A1W2PRX2 142 aa3.6□□□□□ -1.83
CCDC39-203ENST00000473854 TBX1O43435 398 aa3.6□□□□□ -1.83
CCDC39-203ENST00000473854 ITGB1P05556 798 aa3.6□□□□□ -1.83
CCDC39-203ENST00000473854 SCNN1GP51170 649 aa3.6□□□□□ -1.83
CCDC39-203ENST00000473854 FANCCQ00597 558 aa3.6□□□□□ -1.83
CCDC39-203ENST00000473854 PAK2Q13177 524 aa3.6□□□□□ -1.83
CCDC39-203ENST00000473854 RIN1Q13671 783 aa3.6□□□□□ -1.83
CCDC39-203ENST00000473854 STILQ15468 1287 aa3.6□□□□□ -1.83
CCDC39-203ENST00000473854 HABP4Q5JVS0 413 aaKnown RBP3.6□□□□□ -1.83
CCDC39-203ENST00000473854 DENND5AQ6IQ26 1287 aa3.6□□□□□ -1.83
CCDC39-203ENST00000473854 KCNV1Q6PIU1 500 aa3.6□□□□□ -1.83
CCDC39-203ENST00000473854 LARP4Q71RC2 724 aaKnown RBP eCLIP3.6□□□□□ -1.83
CCDC39-203ENST00000473854 RHOUQ7L0Q8 258 aa3.6□□□□□ -1.83
CCDC39-203ENST00000473854 FILIP1Q7Z7B0 1213 aa3.6□□□□□ -1.83
CCDC39-203ENST00000473854 RBM12BQ8IXT5 1001 aaKnown RBP3.6□□□□□ -1.83
CCDC39-203ENST00000473854 OR14K1Q8NGZ2 314 aa3.6□□□□□ -1.83
CCDC39-203ENST00000473854 PROKR1Q8TCW9 393 aa3.6□□□□□ -1.83
CCDC39-203ENST00000473854 THAP3Q8WTV1 239 aaPredicted RBP3.6□□□□□ -1.83
CCDC39-203ENST00000473854 C1orf159Q96HA4 380 aa3.6□□□□□ -1.83
CCDC39-203ENST00000473854 ZFYVE21Q9BQ24 234 aa3.6□□□□□ -1.83
CCDC39-203ENST00000473854 LGR4Q9BXB1 951 aa3.6□□□□□ -1.83
CCDC39-203ENST00000473854 INCENPQ9NQS7 918 aa3.6□□□□□ -1.83
CCDC39-203ENST00000473854 Q9UFV3 132 aa3.6□□□□□ -1.83
CCDC39-203ENST00000473854 FZD1Q9UP38 647 aa3.6□□□□□ -1.83
CCDC39-203ENST00000473854 SH3BP1Q9Y3L3 701 aa3.6□□□□□ -1.83
CCDC39-203ENST00000473854 GOLGA6L6A8MZA4 724 aa3.59□□□□□ -1.83
CCDC39-203ENST00000473854 ACOT7O00154 380 aa3.59□□□□□ -1.83
CCDC39-203ENST00000473854 AGRPO00253 132 aa3.59□□□□□ -1.83
CCDC39-203ENST00000473854 ABHD16AO95870 558 aa3.59□□□□□ -1.83
CCDC39-203ENST00000473854 PTGS1P23219 599 aa3.59□□□□□ -1.83
CCDC39-203ENST00000473854 ADCY8P40145 1251 aa3.59□□□□□ -1.83
CCDC39-203ENST00000473854 IL13RA1P78552 427 aa3.59□□□□□ -1.83
CCDC39-203ENST00000473854 SF1Q15637 639 aaKnown RBP3.59□□□□□ -1.83
CCDC39-203ENST00000473854 GAREM2Q75VX8 874 aa3.59□□□□□ -1.83
CCDC39-203ENST00000473854 HDGFL2Q7Z4V5 671 aaPredicted RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms