RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 CYFIP2Q96F07 1278 aa11.09□□□□□ -0.63
APTX-216ENST00000472896 ATP6V1G3Q96LB4 118 aa11.09□□□□□ -0.63
APTX-216ENST00000472896 SENP6Q9GZR1 1112 aaPredicted RBP11.09□□□□□ -0.63
APTX-216ENST00000472896 PORCNQ9H237 461 aa11.09□□□□□ -0.63
APTX-216ENST00000472896 KDM4CQ9H3R0 1056 aa11.09□□□□□ -0.63
APTX-216ENST00000472896 STIM2Q9P246 746 aa11.09□□□□□ -0.63
APTX-216ENST00000472896 RNF14Q9UBS8 474 aa11.09□□□□□ -0.63
APTX-216ENST00000472896 SNX12Q9UMY4 172 aa11.09□□□□□ -0.63
APTX-216ENST00000472896 PPP1R3GB7ZBB8 358 aa11.08□□□□□ -0.64
APTX-216ENST00000472896 PDE2AO00408 941 aaPredicted RBP11.08□□□□□ -0.64
APTX-216ENST00000472896 SRGAP2O75044 1071 aa11.08□□□□□ -0.64
APTX-216ENST00000472896 PDHBP11177 359 aa11.08□□□□□ -0.64
APTX-216ENST00000472896 IDEP14735 1019 aa11.08□□□□□ -0.64
APTX-216ENST00000472896 TIMM10P62072 90 aa11.08□□□□□ -0.64
APTX-216ENST00000472896 ATP2B2Q01814 1243 aa11.08□□□□□ -0.64
APTX-216ENST00000472896 MECOMQ03112 1051 aa11.08□□□□□ -0.64
APTX-216ENST00000472896 PAK2Q13177 524 aa11.08□□□□□ -0.64
APTX-216ENST00000472896 TTF1Q15361 905 aaPredicted RBP11.08□□□□□ -0.64
APTX-216ENST00000472896 SAFBQ15424 915 aaKnown RBP eCLIP11.08□□□□□ -0.64
APTX-216ENST00000472896 SHHQ15465 462 aa11.08□□□□□ -0.64
APTX-216ENST00000472896 TTC19Q6DKK2 380 aaPredicted RBP11.08□□□□□ -0.64
APTX-216ENST00000472896 LRIG3Q6UXM1 1119 aa11.08□□□□□ -0.64
APTX-216ENST00000472896 TRIM58Q8NG06 486 aa11.08□□□□□ -0.64
APTX-216ENST00000472896 ITFG2Q969R8 447 aa11.08□□□□□ -0.64
APTX-216ENST00000472896 SCLT1Q96NL6 688 aa11.08□□□□□ -0.64
APTX-216ENST00000472896 DBNDD2Q9BQY9 259 aa11.08□□□□□ -0.64
APTX-216ENST00000472896 EBF2Q9HAK2 575 aa11.08□□□□□ -0.64
APTX-216ENST00000472896 ZNHIT6Q9NWK9 470 aaKnown RBP11.08□□□□□ -0.64
APTX-216ENST00000472896 RWDD2AQ9UIY3 292 aa11.08□□□□□ -0.64
APTX-216ENST00000472896 CAPN11Q9UMQ6 739 aa11.08□□□□□ -0.64
APTX-216ENST00000472896 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.08□□□□□ -0.64
APTX-216ENST00000472896 GMNCA6NCL1 334 aa11.08□□□□□ -0.64
APTX-216ENST00000472896 TACC1O75410 805 aa11.08□□□□□ -0.64
APTX-216ENST00000472896 CIAO1O76071 339 aa11.08□□□□□ -0.64
APTX-216ENST00000472896 SNUPNO95149 360 aaKnown RBP11.08□□□□□ -0.64
APTX-216ENST00000472896 ZFYP08048 801 aaPredicted RBP11.08□□□□□ -0.64
APTX-216ENST00000472896 HOXA7P31268 230 aaPredicted RBP11.08□□□□□ -0.64
APTX-216ENST00000472896 PRPHP41219 470 aa11.08□□□□□ -0.64
APTX-216ENST00000472896 PAFAH1B1P43034 410 aa11.08□□□□□ -0.64
APTX-216ENST00000472896 METAP2P50579 478 aaKnown RBP eCLIP11.08□□□□□ -0.64
APTX-216ENST00000472896 ATP1A2P50993 1020 aa11.08□□□□□ -0.64
APTX-216ENST00000472896 ATN1P54259 1190 aaPredicted RBP11.08□□□□□ -0.64
APTX-216ENST00000472896 MTMR2Q13614 643 aa11.08□□□□□ -0.64
APTX-216ENST00000472896 MEA1Q16626 185 aa11.08□□□□□ -0.64
APTX-216ENST00000472896 ZNF697Q5TEC3 545 aa11.08□□□□□ -0.64
APTX-216ENST00000472896 CREG2Q8IUH2 290 aa11.08□□□□□ -0.64
APTX-216ENST00000472896 NOSTRINQ8IVI9 506 aa11.08□□□□□ -0.64
APTX-216ENST00000472896 EIF1ADQ8N9N8 165 aaKnown RBP11.08□□□□□ -0.64
APTX-216ENST00000472896 MAFAQ8NHW3 353 aaPredicted RBP11.08□□□□□ -0.64
APTX-216ENST00000472896 MYLIPQ8WY64 445 aa11.08□□□□□ -0.64
APTX-216ENST00000472896 LBHD1Q9BQE6 289 aaPredicted RBP11.08□□□□□ -0.64
APTX-216ENST00000472896 PYM1Q9BRP8 204 aaKnown RBP11.08□□□□□ -0.64
APTX-216ENST00000472896 LRRC1Q9BTT6 524 aa11.08□□□□□ -0.64
APTX-216ENST00000472896 WDR18Q9BV38 432 aa11.08□□□□□ -0.64
APTX-216ENST00000472896 NUP58Q9BVL2 599 aa11.08□□□□□ -0.64
APTX-216ENST00000472896 GJB4Q9NTQ9 266 aa11.08□□□□□ -0.64
APTX-216ENST00000472896 AATFQ9NY61 560 aaKnown RBP eCLIP11.08□□□□□ -0.64
APTX-216ENST00000472896 FLRT1Q9NZU1 646 aa11.08□□□□□ -0.64
APTX-216ENST00000472896 TRIM10Q9UDY6 481 aa11.08□□□□□ -0.64
APTX-216ENST00000472896 LUC7L2Q9Y383 392 aaKnown RBP11.08□□□□□ -0.64
APTX-216ENST00000472896 E7EVH7 732 aa11.07□□□□□ -0.64
APTX-216ENST00000472896 GSTA1P08263 222 aa11.07□□□□□ -0.64
APTX-216ENST00000472896 CDK17Q00537 523 aa11.07□□□□□ -0.64
APTX-216ENST00000472896 ITGB3BPQ13352 177 aaPredicted RBP11.07□□□□□ -0.64
APTX-216ENST00000472896 C9orf50Q5SZB4 431 aa11.07□□□□□ -0.64
APTX-216ENST00000472896 GPR142Q7Z601 462 aa11.07□□□□□ -0.64
APTX-216ENST00000472896 SLF2Q8IX21 1173 aa11.07□□□□□ -0.64
APTX-216ENST00000472896 RETREG2Q8NC44 543 aa11.07□□□□□ -0.64
APTX-216ENST00000472896 SPATA4Q8NEY3 305 aa11.07□□□□□ -0.64
APTX-216ENST00000472896 RASSF8Q8NHQ8 419 aa11.07□□□□□ -0.64
APTX-216ENST00000472896 CCDC26Q8TAB7 109 aa11.07□□□□□ -0.64
APTX-216ENST00000472896 WHAMMQ8TF30 809 aa11.07□□□□□ -0.64
APTX-216ENST00000472896 SOCS4Q8WXH5 440 aa11.07□□□□□ -0.64
APTX-216ENST00000472896 CUL5Q93034 780 aa11.07□□□□□ -0.64
APTX-216ENST00000472896 IQCDQ96DY2 449 aa11.07□□□□□ -0.64
APTX-216ENST00000472896 CHP1Q99653 195 aa11.07□□□□□ -0.64
APTX-216ENST00000472896 MOV10L1Q9BXT6 1211 aaKnown RBP11.07□□□□□ -0.64
APTX-216ENST00000472896 TTYH1Q9H313 450 aaPredicted RBP11.07□□□□□ -0.64
APTX-216ENST00000472896 FOXP1Q9H334 677 aaPredicted RBP11.07□□□□□ -0.64
APTX-216ENST00000472896 JADE2Q9NQC1 790 aa11.07□□□□□ -0.64
APTX-216ENST00000472896 HAUS2Q9NVX0 235 aa11.07□□□□□ -0.64
APTX-216ENST00000472896 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.07□□□□□ -0.64
APTX-216ENST00000472896 NDUFB9Q9Y6M9 179 aa11.07□□□□□ -0.64
APTX-216ENST00000472896 USO1O60763 962 aaKnown RBP11.06□□□□□ -0.64
APTX-216ENST00000472896 CD44P16070 742 aaKnown RBP11.06□□□□□ -0.64
APTX-216ENST00000472896 SCTRP47872 440 aa11.06□□□□□ -0.64
APTX-216ENST00000472896 BACE1P56817 501 aa11.06□□□□□ -0.64
APTX-216ENST00000472896 STX17P56962 302 aa11.06□□□□□ -0.64
APTX-216ENST00000472896 ANTXR2P58335 489 aa11.06□□□□□ -0.64
APTX-216ENST00000472896 GUCY1A3Q02108 690 aa11.06□□□□□ -0.64
APTX-216ENST00000472896 DPYDQ12882 1025 aa11.06□□□□□ -0.64
APTX-216ENST00000472896 TCP11X2Q5H9J9 407 aa11.06□□□□□ -0.64
APTX-216ENST00000472896 SPTY2D1Q68D10 685 aaPredicted RBP11.06□□□□□ -0.64
APTX-216ENST00000472896 PLEKHH3Q7Z736 793 aa11.06□□□□□ -0.64
APTX-216ENST00000472896 APLFQ8IW19 511 aaPredicted RBP11.06□□□□□ -0.64
APTX-216ENST00000472896 CACNA2D3Q8IZS8 1091 aa11.06□□□□□ -0.64
APTX-216ENST00000472896 CCDC43Q96MW1 224 aaKnown RBP11.06□□□□□ -0.64
APTX-216ENST00000472896 GPHNQ9NQX3 736 aaPredicted RBP11.06□□□□□ -0.64
APTX-216ENST00000472896 GDF3Q9NR23 364 aa11.06□□□□□ -0.64
APTX-216ENST00000472896 CPSF2Q9P2I0 782 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms