RNA–Protein interactions for RNA: ENST00000472308.1

SHH-205, Transcript of sonic hedgehog, humanhuman

TSL 1 (best)

Gene SHH, Length 504 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHH-205ENST00000472308 TROAPQ12815 778 aa21.18■□□□□ 0.98
SHH-205ENST00000472308 PAK2Q13177 524 aa21.18■□□□□ 0.98
SHH-205ENST00000472308 IER5Q5VY09 327 aa21.18■□□□□ 0.98
SHH-205ENST00000472308 SYCE2Q6PIF2 218 aa21.18■□□□□ 0.98
SHH-205ENST00000472308 TMEM184AQ6ZMB5 413 aa21.18■□□□□ 0.98
SHH-205ENST00000472308 NLRX1Q86UT6 975 aa21.18■□□□□ 0.98
SHH-205ENST00000472308 MICAL1Q8TDZ2 1067 aa21.18■□□□□ 0.98
SHH-205ENST00000472308 GLG1Q92896 1179 aa21.18■□□□□ 0.98
SHH-205ENST00000472308 GPRASP2Q96D09 838 aa21.18■□□□□ 0.98
SHH-205ENST00000472308 PCYT2Q99447 389 aa21.18■□□□□ 0.98
SHH-205ENST00000472308 CDCA3Q99618 268 aaPredicted RBP21.18■□□□□ 0.98
SHH-205ENST00000472308 IL25Q9H293 177 aa21.18■□□□□ 0.98
SHH-205ENST00000472308 FAM186AA6NE01 2351 aa21.17■□□□□ 0.98
SHH-205ENST00000472308 PIK3CDO00329 1044 aa21.17■□□□□ 0.98
SHH-205ENST00000472308 MGEA5O60502 916 aa21.17■□□□□ 0.98
SHH-205ENST00000472308 FGF18O76093 207 aa21.17■□□□□ 0.98
SHH-205ENST00000472308 RPLP2P05387 115 aaKnown RBP21.17■□□□□ 0.98
SHH-205ENST00000472308 ITGB5P18084 799 aa21.17■□□□□ 0.98
SHH-205ENST00000472308 SP100P23497 879 aaPredicted RBP21.17■□□□□ 0.98
SHH-205ENST00000472308 HDAC1Q13547 482 aaPredicted RBP21.17■□□□□ 0.98
SHH-205ENST00000472308 PIBF1Q8WXW3 757 aa21.17■□□□□ 0.98
SHH-205ENST00000472308 SMARCAD1Q9H4L7 1026 aa21.17■□□□□ 0.98
SHH-205ENST00000472308 DIAPH3Q9NSV4 1193 aa21.17■□□□□ 0.98
SHH-205ENST00000472308 CDH22Q9UJ99 828 aa21.17■□□□□ 0.98
SHH-205ENST00000472308 GVINP1Q7Z2Y8 2422 aa21.17■□□□□ 0.98
SHH-205ENST00000472308 CACNA1AO00555 2505 aa21.16■□□□□ 0.98
SHH-205ENST00000472308 NBL1P41271 181 aa21.16■□□□□ 0.98
SHH-205ENST00000472308 SARSP49591 514 aaKnown RBP21.16■□□□□ 0.98
SHH-205ENST00000472308 TMEM266Q2M3C6 531 aa21.16■□□□□ 0.98
SHH-205ENST00000472308 ANKRD54Q6NXT1 300 aa21.16■□□□□ 0.98
SHH-205ENST00000472308 TMEM105Q8N8V8 129 aa21.16■□□□□ 0.98
SHH-205ENST00000472308 SMARCC2Q8TAQ2 1214 aa21.16■□□□□ 0.98
SHH-205ENST00000472308 TRAPPC12Q8WVT3 735 aa21.16■□□□□ 0.98
SHH-205ENST00000472308 APOL5Q9BWW9 433 aa21.16■□□□□ 0.98
SHH-205ENST00000472308 PKD2L1Q9P0L9 805 aa21.16■□□□□ 0.98
SHH-205ENST00000472308 LRFN2Q9ULH4 789 aa21.16■□□□□ 0.98
SHH-205ENST00000472308 PCDHB12Q9Y5F1 795 aa21.16■□□□□ 0.98
SHH-205ENST00000472308 FNDC1Q4ZHG4 1894 aaPredicted RBP21.15■□□□□ 0.98
SHH-205ENST00000472308 KDM3AQ9Y4C1 1321 aa21.15■□□□□ 0.98
SHH-205ENST00000472308 FSD2A1L4K1 749 aa21.15■□□□□ 0.98
SHH-205ENST00000472308 RRN3P2A6NIE6 340 aa21.15■□□□□ 0.98
SHH-205ENST00000472308 IBSPP21815 317 aaPredicted RBP21.15■□□□□ 0.98
SHH-205ENST00000472308 TECP42680 631 aa21.15■□□□□ 0.98
SHH-205ENST00000472308 ZBTB33Q86T24 672 aa21.15■□□□□ 0.98
SHH-205ENST00000472308 KREMEN2Q8NCW0 462 aa21.15■□□□□ 0.98
SHH-205ENST00000472308 CELF4Q9BZC1 486 aaKnown RBP21.15■□□□□ 0.98
SHH-205ENST00000472308 PCDHA2Q9Y5H9 948 aa21.15■□□□□ 0.98
SHH-205ENST00000472308 LOXHD1Q8IVV2 1947 aa21.15■□□□□ 0.98
SHH-205ENST00000472308 DNAH14Q0VDD8 3507 aa21.14■□□□□ 0.97
SHH-205ENST00000472308 BRD1O95696 1058 aa21.14■□□□□ 0.97
SHH-205ENST00000472308 APOBRQ0VD83 1088 aa21.14■□□□□ 0.97
SHH-205ENST00000472308 FAM102BQ5T8I3 360 aa21.14■□□□□ 0.97
SHH-205ENST00000472308 COLGALT1Q8NBJ5 622 aa21.14■□□□□ 0.97
SHH-205ENST00000472308 RASGRP4Q8TDF6 673 aa21.14■□□□□ 0.97
SHH-205ENST00000472308 CDHR1Q96JP9 859 aa21.14■□□□□ 0.97
SHH-205ENST00000472308 SMOC2Q9H3U7 446 aa21.14■□□□□ 0.97
SHH-205ENST00000472308 TMEM260Q9NX78 707 aa21.14■□□□□ 0.97
SHH-205ENST00000472308 TRPC6Q9Y210 931 aa21.14■□□□□ 0.97
SHH-205ENST00000472308 TBKBP1A7MCY6 615 aa21.13■□□□□ 0.97
SHH-205ENST00000472308 M0QZ92 97 aa21.13■□□□□ 0.97
SHH-205ENST00000472308 SPOUT1Q5T280 376 aaKnown RBP21.13■□□□□ 0.97
SHH-205ENST00000472308 PLPP4Q5VZY2 271 aa21.13■□□□□ 0.97
SHH-205ENST00000472308 PDE12Q6L8Q7 609 aaKnown RBP21.13■□□□□ 0.97
SHH-205ENST00000472308 PLEKHM2Q8IWE5 1019 aa21.13■□□□□ 0.97
SHH-205ENST00000472308 THNSL1Q8IYQ7 743 aa21.13■□□□□ 0.97
SHH-205ENST00000472308 OSBPL3Q9H4L5 887 aa21.13■□□□□ 0.97
SHH-205ENST00000472308 ERVK-5Q9HDB9 667 aa21.13■□□□□ 0.97
SHH-205ENST00000472308 AAASQ9NRG9 546 aa21.13■□□□□ 0.97
SHH-205ENST00000472308 TYW1Q9NV66 732 aaKnown RBP21.13■□□□□ 0.97
SHH-205ENST00000472308 PCDHB7Q9Y5E2 793 aa21.13■□□□□ 0.97
SHH-205ENST00000472308 UBIAD1Q9Y5Z9 338 aa21.13■□□□□ 0.97
SHH-205ENST00000472308 DMXL1Q9Y485 3027 aa21.13■□□□□ 0.97
SHH-205ENST00000472308 HIDE1A8MVS5 230 aa21.12■□□□□ 0.97
SHH-205ENST00000472308 IFIT3O14879 490 aaKnown RBP21.12■□□□□ 0.97
SHH-205ENST00000472308 MTMR1Q13613 665 aa21.12■□□□□ 0.97
SHH-205ENST00000472308 PLCB4Q15147 1175 aa21.12■□□□□ 0.97
SHH-205ENST00000472308 LLGL2Q6P1M3 1020 aa21.12■□□□□ 0.97
SHH-205ENST00000472308 CUL5Q93034 780 aa21.12■□□□□ 0.97
SHH-205ENST00000472308 CWH43Q9H720 699 aa21.12■□□□□ 0.97
SHH-205ENST00000472308 SORCS3Q9UPU3 1222 aa21.12■□□□□ 0.97
SHH-205ENST00000472308 SRGAP2BP0DMP2 458 aa21.11■□□□□ 0.97
SHH-205ENST00000472308 KRT76Q01546 638 aa21.11■□□□□ 0.97
SHH-205ENST00000472308 NFX1Q12986 1120 aaKnown RBP21.11■□□□□ 0.97
SHH-205ENST00000472308 MTMR3Q13615 1198 aa21.11■□□□□ 0.97
SHH-205ENST00000472308 DIEXFQ68CQ4 756 aaKnown RBP21.11■□□□□ 0.97
SHH-205ENST00000472308 UBALD2Q8IYN6 164 aa21.11■□□□□ 0.97
SHH-205ENST00000472308 TMEM40Q8WWA1 233 aa21.11■□□□□ 0.97
SHH-205ENST00000472308 TSHZ2Q9NRE2 1034 aa21.11■□□□□ 0.97
SHH-205ENST00000472308 LZTS1Q9Y250 596 aa21.11■□□□□ 0.97
SHH-205ENST00000472308 NOC2LQ9Y3T9 749 aaKnown RBP21.11■□□□□ 0.97
SHH-205ENST00000472308 TAF6LQ9Y6J9 622 aa21.11■□□□□ 0.97
SHH-205ENST00000472308 ZNF292O60281 2723 aa21.11■□□□□ 0.97
SHH-205ENST00000472308 SMIM35A0A1B0GVV1 85 aa21.1■□□□□ 0.97
SHH-205ENST00000472308 C2CD4DB7Z1M9 353 aa21.1■□□□□ 0.97
SHH-205ENST00000472308 C9IYK1 514 aa21.1■□□□□ 0.97
SHH-205ENST00000472308 HIP1O00291 1037 aa21.1■□□□□ 0.97
SHH-205ENST00000472308 FGFR1P11362 822 aa21.1■□□□□ 0.97
SHH-205ENST00000472308 ERMP1Q7Z2K6 904 aa21.1■□□□□ 0.97
SHH-205ENST00000472308 FRMD5Q7Z6J6 570 aa21.1■□□□□ 0.97
SHH-205ENST00000472308 MRPS27Q92552 414 aaKnown RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms