RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 IL17RAQ96F46 866 aa25.63■■□□□ 1.69
C9orf3-213ENST00000471978 UIMC1Q96RL1 719 aa25.63■■□□□ 1.69
C9orf3-213ENST00000471978 M0QZ92 97 aa25.62■■□□□ 1.69
C9orf3-213ENST00000471978 ENPP3O14638 875 aa25.62■■□□□ 1.69
C9orf3-213ENST00000471978 DHX15O43143 795 aaKnown RBP25.62■■□□□ 1.69
C9orf3-213ENST00000471978 TMEM62Q0P6H9 643 aa25.62■■□□□ 1.69
C9orf3-213ENST00000471978 TMEM192Q8IY95 271 aa25.62■■□□□ 1.69
C9orf3-213ENST00000471978 NECAB3Q96P71 396 aaPredicted RBP25.62■■□□□ 1.69
C9orf3-213ENST00000471978 ZNF577Q9BSK1 485 aa25.62■■□□□ 1.69
C9orf3-213ENST00000471978 SLC26A6Q9BXS9 759 aa25.62■■□□□ 1.69
C9orf3-213ENST00000471978 RNF26Q9BY78 433 aaPredicted RBP25.62■■□□□ 1.69
C9orf3-213ENST00000471978 AGO3Q9H9G7 860 aaKnown RBP25.62■■□□□ 1.69
C9orf3-213ENST00000471978 COL4A6Q14031 1691 aa25.61■■□□□ 1.69
C9orf3-213ENST00000471978 IFNAR1P17181 557 aa25.61■■□□□ 1.69
C9orf3-213ENST00000471978 PDIA3P30101 505 aaKnown RBP25.61■■□□□ 1.69
C9orf3-213ENST00000471978 CD52P31358 61 aa25.61■■□□□ 1.69
C9orf3-213ENST00000471978 EVCP57679 992 aa25.61■■□□□ 1.69
C9orf3-213ENST00000471978 CCT2P78371 535 aaKnown RBP25.61■■□□□ 1.69
C9orf3-213ENST00000471978 MIS18BP1Q6P0N0 1132 aa25.61■■□□□ 1.69
C9orf3-213ENST00000471978 MTHFD1LQ6UB35 978 aa25.61■■□□□ 1.69
C9orf3-213ENST00000471978 RUFY3Q7L099 469 aa25.61■■□□□ 1.69
C9orf3-213ENST00000471978 CCDC60Q8IWA6 550 aaPredicted RBP25.61■■□□□ 1.69
C9orf3-213ENST00000471978 BICD2Q8TD16 824 aa25.61■■□□□ 1.69
C9orf3-213ENST00000471978 NCOA5Q9HCD5 579 aaKnown RBP25.61■■□□□ 1.69
C9orf3-213ENST00000471978 ZNF302Q9NR11 478 aa25.61■■□□□ 1.69
C9orf3-213ENST00000471978 TRPV2Q9Y5S1 764 aa25.61■■□□□ 1.69
C9orf3-213ENST00000471978 SQORQ9Y6N5 450 aa25.61■■□□□ 1.69
C9orf3-213ENST00000471978 TCF20Q9UGU0 1960 aaKnown RBP25.61■■□□□ 1.69
C9orf3-213ENST00000471978 SMIM35A0A1B0GVV1 85 aa25.6■■□□□ 1.69
C9orf3-213ENST00000471978 EPB41L2O43491 1005 aaKnown RBP25.6■■□□□ 1.69
C9orf3-213ENST00000471978 SETQ01105 290 aaPredicted RBP25.6■■□□□ 1.69
C9orf3-213ENST00000471978 FIBCD1Q8N539 461 aa25.6■■□□□ 1.69
C9orf3-213ENST00000471978 CCDC148Q8NFR7 591 aa25.6■■□□□ 1.69
C9orf3-213ENST00000471978 RASGRP4Q8TDF6 673 aa25.6■■□□□ 1.69
C9orf3-213ENST00000471978 ATP8B4Q8TF62 1192 aa25.6■■□□□ 1.69
C9orf3-213ENST00000471978 MRPL38Q96DV4 380 aaKnown RBP25.6■■□□□ 1.69
C9orf3-213ENST00000471978 ZSWIM6Q9HCJ5 1215 aa25.6■■□□□ 1.69
C9orf3-213ENST00000471978 TBC1D22BQ9NU19 505 aa25.6■■□□□ 1.69
C9orf3-213ENST00000471978 H3BNC9 293 aa25.59■■□□□ 1.69
C9orf3-213ENST00000471978 HBP1O60381 514 aa25.59■■□□□ 1.69
C9orf3-213ENST00000471978 GPM6BQ13491 265 aa25.59■■□□□ 1.69
C9orf3-213ENST00000471978 PTPROQ16827 1216 aa25.59■■□□□ 1.69
C9orf3-213ENST00000471978 SWSAP1Q6NVH7 229 aa25.59■■□□□ 1.69
C9orf3-213ENST00000471978 PDXDC2PQ6P474 469 aa25.59■■□□□ 1.69
C9orf3-213ENST00000471978 NME8Q8N427 588 aa25.59■■□□□ 1.69
C9orf3-213ENST00000471978 CELF4Q9BZC1 486 aaKnown RBP25.59■■□□□ 1.69
C9orf3-213ENST00000471978 VPS54Q9P1Q0 977 aa25.59■■□□□ 1.69
C9orf3-213ENST00000471978 KLRC1P26715 233 aa25.58■■□□□ 1.69
C9orf3-213ENST00000471978 TOB2Q14106 344 aaPredicted RBP25.58■■□□□ 1.69
C9orf3-213ENST00000471978 PRR16Q569H4 304 aa25.58■■□□□ 1.69
C9orf3-213ENST00000471978 FTHL17Q9BXU8 183 aa25.58■■□□□ 1.69
C9orf3-213ENST00000471978 CYP46A1Q9Y6A2 500 aa25.58■■□□□ 1.69
C9orf3-213ENST00000471978 CIITAP33076 1130 aa25.57■■□□□ 1.68
C9orf3-213ENST00000471978 KRT76Q01546 638 aa25.57■■□□□ 1.68
C9orf3-213ENST00000471978 ZNF746Q6NUN9 644 aaPredicted RBP25.57■■□□□ 1.68
C9orf3-213ENST00000471978 LINC01599Q8WXQ3 324 aa25.57■■□□□ 1.68
C9orf3-213ENST00000471978 TCEAL9Q9UHQ7 104 aa25.57■■□□□ 1.68
C9orf3-213ENST00000471978 PADI3Q9ULW8 664 aa25.57■■□□□ 1.68
C9orf3-213ENST00000471978 ADGRA3Q8IWK6 1321 aa25.57■■□□□ 1.68
C9orf3-213ENST00000471978 IGSF9BQ9UPX0 1349 aa25.57■■□□□ 1.68
C9orf3-213ENST00000471978 COL1A2P08123 1366 aa25.56■■□□□ 1.68
C9orf3-213ENST00000471978 BRWD1Q9NSI6 2320 aa25.56■■□□□ 1.68
C9orf3-213ENST00000471978 CTNNB1P35222 781 aa25.56■■□□□ 1.68
C9orf3-213ENST00000471978 PAK2Q13177 524 aa25.56■■□□□ 1.68
C9orf3-213ENST00000471978 ZNF484Q5JVG2 852 aa25.56■■□□□ 1.68
C9orf3-213ENST00000471978 RTN4RL1Q86UN2 441 aaPredicted RBP25.56■■□□□ 1.68
C9orf3-213ENST00000471978 CKAP2LQ8IYA6 745 aa25.56■■□□□ 1.68
C9orf3-213ENST00000471978 SMAP1Q8IYB5 467 aaPredicted RBP25.56■■□□□ 1.68
C9orf3-213ENST00000471978 UBE2ZQ9H832 354 aaPredicted RBP25.56■■□□□ 1.68
C9orf3-213ENST00000471978 RC3H2Q9HBD1 1191 aaKnown RBP25.56■■□□□ 1.68
C9orf3-213ENST00000471978 SH3GLB2Q9NR46 395 aa25.56■■□□□ 1.68
C9orf3-213ENST00000471978 KDM3AQ9Y4C1 1321 aa25.56■■□□□ 1.68
C9orf3-213ENST00000471978 ATP4AP20648 1035 aa25.55■■□□□ 1.68
C9orf3-213ENST00000471978 TRIM22Q8IYM9 498 aa25.55■■□□□ 1.68
C9orf3-213ENST00000471978 ZNF689Q96CS4 500 aaPredicted RBP25.55■■□□□ 1.68
C9orf3-213ENST00000471978 PCDHA10Q9Y5I2 948 aa25.55■■□□□ 1.68
C9orf3-213ENST00000471978 MAFBQ9Y5Q3 323 aaPredicted RBP25.55■■□□□ 1.68
C9orf3-213ENST00000471978 NLRC5Q86WI3 1866 aa25.55■■□□□ 1.68
C9orf3-213ENST00000471978 TTC3P53804 2025 aa25.54■■□□□ 1.68
C9orf3-213ENST00000471978 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.54■■□□□ 1.68
C9orf3-213ENST00000471978 DGKIO75912 1065 aa25.54■■□□□ 1.68
C9orf3-213ENST00000471978 NEFLP07196 543 aa25.54■■□□□ 1.68
C9orf3-213ENST00000471978 PSAPP07602 524 aa25.54■■□□□ 1.68
C9orf3-213ENST00000471978 NLRP5P59047 1200 aa25.54■■□□□ 1.68
C9orf3-213ENST00000471978 SSRP1Q08945 709 aaKnown RBP25.54■■□□□ 1.68
C9orf3-213ENST00000471978 BTG3Q14201 252 aaPredicted RBP25.54■■□□□ 1.68
C9orf3-213ENST00000471978 TIGD5Q53EQ6 642 aa25.54■■□□□ 1.68
C9orf3-213ENST00000471978 KIAA0319LQ8IZA0 1049 aa25.54■■□□□ 1.68
C9orf3-213ENST00000471978 BBXQ8WY36 941 aaPredicted RBP25.54■■□□□ 1.68
C9orf3-213ENST00000471978 LENG9Q96B70 501 aa25.54■■□□□ 1.68
C9orf3-213ENST00000471978 GINS2Q9Y248 185 aa25.54■■□□□ 1.68
C9orf3-213ENST00000471978 RWDD3Q9Y3V2 267 aa25.54■■□□□ 1.68
C9orf3-213ENST00000471978 RALGAPA2Q2PPJ7 1873 aa25.53■■□□□ 1.68
C9orf3-213ENST00000471978 ZBTB42B2RXF5 422 aa25.53■■□□□ 1.68
C9orf3-213ENST00000471978 C5orf67F2Z3F1 127 aa25.53■■□□□ 1.68
C9orf3-213ENST00000471978 RB1P06400 928 aa25.53■■□□□ 1.68
C9orf3-213ENST00000471978 LINC00271P0C7V0 271 aa25.53■■□□□ 1.68
C9orf3-213ENST00000471978 BMPR1AP36894 532 aa25.53■■□□□ 1.68
C9orf3-213ENST00000471978 TMEM266Q2M3C6 531 aa25.53■■□□□ 1.68
C9orf3-213ENST00000471978 TRMT1LQ7Z2T5 733 aaKnown RBP25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms