RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 AZI2Q9H6S1 392 aa21.46■■□□□ 1.03
PSPC1-203ENST00000471658 XPNPEP3Q9NQH7 507 aa21.46■■□□□ 1.03
PSPC1-203ENST00000471658 DNM3Q9UQ16 869 aa21.46■■□□□ 1.03
PSPC1-203ENST00000471658 ADAMTS4O75173 837 aa21.45■■□□□ 1.02
PSPC1-203ENST00000471658 LYPLA2O95372 231 aa21.45■■□□□ 1.02
PSPC1-203ENST00000471658 HOXD8P13378 290 aaPredicted RBP21.45■■□□□ 1.02
PSPC1-203ENST00000471658 MUTP22033 750 aa21.45■■□□□ 1.02
PSPC1-203ENST00000471658 MARK3P27448 753 aa21.45■■□□□ 1.02
PSPC1-203ENST00000471658 CASP1P29466 404 aa21.45■■□□□ 1.02
PSPC1-203ENST00000471658 AFMP43652 599 aa21.45■■□□□ 1.02
PSPC1-203ENST00000471658 PRKCEQ02156 737 aa21.45■■□□□ 1.02
PSPC1-203ENST00000471658 FSCN1Q16658 493 aaKnown RBP21.45■■□□□ 1.02
PSPC1-203ENST00000471658 SKOR2Q2VWA4 1001 aaPredicted RBP21.45■■□□□ 1.02
PSPC1-203ENST00000471658 FAM160B1Q5W0V3 765 aa21.45■■□□□ 1.02
PSPC1-203ENST00000471658 LHX8Q68G74 356 aa21.45■■□□□ 1.02
PSPC1-203ENST00000471658 CEP57L1Q8IYX8 460 aa21.45■■□□□ 1.02
PSPC1-203ENST00000471658 ERCC4Q92889 916 aaPredicted RBP21.45■■□□□ 1.02
PSPC1-203ENST00000471658 PAGE5Q96GU1 130 aa21.45■■□□□ 1.02
PSPC1-203ENST00000471658 NACC1Q96RE7 527 aa21.45■■□□□ 1.02
PSPC1-203ENST00000471658 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.45■■□□□ 1.02
PSPC1-203ENST00000471658 UPF3AQ9H1J1 476 aaKnown RBP21.45■■□□□ 1.02
PSPC1-203ENST00000471658 MYCNP04198 464 aaPredicted RBP21.44■■□□□ 1.02
PSPC1-203ENST00000471658 SSBP05455 408 aaKnown RBP eCLIP21.44■■□□□ 1.02
PSPC1-203ENST00000471658 PLA2G4BP0C869 781 aa21.44■■□□□ 1.02
PSPC1-203ENST00000471658 DGKDQ16760 1214 aa21.44■■□□□ 1.02
PSPC1-203ENST00000471658 PLA2G4FQ68DD2 849 aa21.44■■□□□ 1.02
PSPC1-203ENST00000471658 ANO5Q75V66 913 aa21.44■■□□□ 1.02
PSPC1-203ENST00000471658 CKAP2LQ8IYA6 745 aa21.44■■□□□ 1.02
PSPC1-203ENST00000471658 LARP4BQ92615 738 aaKnown RBP21.44■■□□□ 1.02
PSPC1-203ENST00000471658 TIGD1Q96MW7 591 aa21.44■■□□□ 1.02
PSPC1-203ENST00000471658 PYM1Q9BRP8 204 aaKnown RBP21.44■■□□□ 1.02
PSPC1-203ENST00000471658 C16orf70Q9BSU1 422 aa21.44■■□□□ 1.02
PSPC1-203ENST00000471658 BHMT2Q9H2M3 363 aa21.44■■□□□ 1.02
PSPC1-203ENST00000471658 CLSTN2Q9H4D0 955 aa21.44■■□□□ 1.02
PSPC1-203ENST00000471658 STK17AQ9UEE5 414 aa21.44■■□□□ 1.02
PSPC1-203ENST00000471658 EMSYQ7Z589 1322 aa21.44■■□□□ 1.02
PSPC1-203ENST00000471658 EYA4O95677 639 aa21.44■■□□□ 1.02
PSPC1-203ENST00000471658 MYL3P08590 195 aa21.44■■□□□ 1.02
PSPC1-203ENST00000471658 PRR29P0C7W0 189 aa21.44■■□□□ 1.02
PSPC1-203ENST00000471658 YWHABP31946 246 aaKnown RBP21.44■■□□□ 1.02
PSPC1-203ENST00000471658 CPT1AP50416 773 aa21.44■■□□□ 1.02
PSPC1-203ENST00000471658 NPEPPSP55786 919 aa21.44■■□□□ 1.02
PSPC1-203ENST00000471658 GNASQ5JWF2 1037 aa21.44■■□□□ 1.02
PSPC1-203ENST00000471658 PLPPR4Q7Z2D5 763 aa21.44■■□□□ 1.02
PSPC1-203ENST00000471658 SH3RF1Q7Z6J0 888 aa21.44■■□□□ 1.02
PSPC1-203ENST00000471658 SMARCAD1Q9H4L7 1026 aa21.44■■□□□ 1.02
PSPC1-203ENST00000471658 USP25Q9UHP3 1055 aa21.44■■□□□ 1.02
PSPC1-203ENST00000471658 WDR81Q562E7 1941 aa21.43■■□□□ 1.02
PSPC1-203ENST00000471658 CCL5P13501 91 aa21.43■■□□□ 1.02
PSPC1-203ENST00000471658 MDM2Q00987 491 aaPredicted RBP21.43■■□□□ 1.02
PSPC1-203ENST00000471658 PLCB4Q15147 1175 aa21.43■■□□□ 1.02
PSPC1-203ENST00000471658 PPP1R13LQ8WUF5 828 aa21.43■■□□□ 1.02
PSPC1-203ENST00000471658 RNPEPQ9H4A4 650 aa21.43■■□□□ 1.02
PSPC1-203ENST00000471658 KBTBD4Q9NVX7 518 aa21.43■■□□□ 1.02
PSPC1-203ENST00000471658 OATP04181 439 aa21.42■■□□□ 1.02
PSPC1-203ENST00000471658 SLC12A3P55017 1021 aa21.42■■□□□ 1.02
PSPC1-203ENST00000471658 PKN2Q16513 984 aaKnown RBP21.42■■□□□ 1.02
PSPC1-203ENST00000471658 XKR3Q5GH77 459 aa21.42■■□□□ 1.02
PSPC1-203ENST00000471658 SV2BQ7L1I2 683 aa21.42■■□□□ 1.02
PSPC1-203ENST00000471658 KLHDC9Q8NEP7 349 aa21.42■■□□□ 1.02
PSPC1-203ENST00000471658 KAT2BQ92831 832 aa21.42■■□□□ 1.02
PSPC1-203ENST00000471658 NUP62CLQ9H1M0 184 aa21.42■■□□□ 1.02
PSPC1-203ENST00000471658 BLZF1Q9H2G9 400 aa21.42■■□□□ 1.02
PSPC1-203ENST00000471658 CUEDC2Q9H467 287 aa21.42■■□□□ 1.02
PSPC1-203ENST00000471658 SPC25Q9HBM1 224 aa21.42■■□□□ 1.02
PSPC1-203ENST00000471658 SEPT9Q9UHD8 586 aaPredicted RBP21.42■■□□□ 1.02
PSPC1-203ENST00000471658 DKC1O60832 514 aaKnown RBP eCLIP21.41■■□□□ 1.02
PSPC1-203ENST00000471658 NKX3-2P78367 333 aa21.41■■□□□ 1.02
PSPC1-203ENST00000471658 PNOCQ13519 176 aa21.41■■□□□ 1.02
PSPC1-203ENST00000471658 SYT2Q8N9I0 419 aaPredicted RBP21.41■■□□□ 1.02
PSPC1-203ENST00000471658 RNF208Q9H0X6 261 aa21.41■■□□□ 1.02
PSPC1-203ENST00000471658 NPHP3-ACAD11A0A0J9YXS1 232 aa21.4■■□□□ 1.02
PSPC1-203ENST00000471658 MYMKA6NI61 221 aa21.4■■□□□ 1.02
PSPC1-203ENST00000471658 H3BRB1 525 aa21.4■■□□□ 1.02
PSPC1-203ENST00000471658 XRCC6P12956 609 aaKnown RBP eCLIP21.4■■□□□ 1.029e-14■■□□□ 11.4
PSPC1-203ENST00000471658 RARRES1P49788 294 aa21.4■■□□□ 1.02
PSPC1-203ENST00000471658 CHMP4BP1P59074 171 aa21.4■■□□□ 1.02
PSPC1-203ENST00000471658 CUL4BQ13620 913 aa21.4■■□□□ 1.02
PSPC1-203ENST00000471658 BRDTQ58F21 947 aaPredicted RBP21.4■■□□□ 1.02
PSPC1-203ENST00000471658 ARSHQ5FYA8 562 aa21.4■■□□□ 1.02
PSPC1-203ENST00000471658 XKR9Q5GH70 373 aa21.4■■□□□ 1.02
PSPC1-203ENST00000471658 TUT1Q9H6E5 874 aaKnown RBP21.4■■□□□ 1.02
PSPC1-203ENST00000471658 POLD4Q9HCU8 107 aa21.4■■□□□ 1.02
PSPC1-203ENST00000471658 PAK6Q9NQU5 681 aaPredicted RBP21.4■■□□□ 1.02
PSPC1-203ENST00000471658 PRDM10Q9NQV6 1147 aa21.4■■□□□ 1.02
PSPC1-203ENST00000471658 ANKEF1Q9NU02 776 aa21.4■■□□□ 1.02
PSPC1-203ENST00000471658 ERAP1Q9NZ08 941 aa21.4■■□□□ 1.02
PSPC1-203ENST00000471658 DBR1Q9UK59 544 aaKnown RBP21.4■■□□□ 1.02
PSPC1-203ENST00000471658 ARHGEF35A5YM69 484 aa21.4■■□□□ 1.02
PSPC1-203ENST00000471658 MSCO60682 206 aa21.4■■□□□ 1.02
PSPC1-203ENST00000471658 LRRC41Q15345 812 aa21.4■■□□□ 1.02
PSPC1-203ENST00000471658 KCNA10Q16322 511 aa21.4■■□□□ 1.02
PSPC1-203ENST00000471658 MTERF2Q49AM1 385 aa21.4■■□□□ 1.02
PSPC1-203ENST00000471658 CCDC183Q5T5S1 534 aa21.4■■□□□ 1.02
PSPC1-203ENST00000471658 CCSAPQ6IQ19 270 aaPredicted RBP21.4■■□□□ 1.02
PSPC1-203ENST00000471658 GPBP1Q86WP2 473 aa21.4■■□□□ 1.02
PSPC1-203ENST00000471658 KCTD17Q8N5Z5 321 aa21.4■■□□□ 1.02
PSPC1-203ENST00000471658 ZNF333Q96JL9 665 aa21.4■■□□□ 1.02
PSPC1-203ENST00000471658 CEP170P1Q96L14 293 aa21.4■■□□□ 1.02
PSPC1-203ENST00000471658 DEFB118Q96PH6 123 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms