RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 GREB1Q4ZG55 1949 aa6.91□□□□□ -1.3
VARS-222ENST00000470953 CREBBPQ92793 2442 aa6.91□□□□□ -1.3
VARS-222ENST00000470953 LAMA1P25391 3075 aa6.91□□□□□ -1.3
VARS-222ENST00000470953 IGKV6D-41A0A0C4DH26 115 aa6.91□□□□□ -1.3
VARS-222ENST00000470953 FSD2A1L4K1 749 aa6.91□□□□□ -1.3
VARS-222ENST00000470953 HAS3O00219 553 aa6.91□□□□□ -1.3
VARS-222ENST00000470953 NFIBO00712 420 aa6.91□□□□□ -1.3
VARS-222ENST00000470953 NKRFO15226 690 aaKnown RBP eCLIP6.91□□□□□ -1.3
VARS-222ENST00000470953 CTSHP09668 335 aa6.91□□□□□ -1.3
VARS-222ENST00000470953 EDNRBP24530 442 aa6.91□□□□□ -1.3
VARS-222ENST00000470953 ITIH3Q06033 890 aa6.91□□□□□ -1.3
VARS-222ENST00000470953 MFSD10Q14728 455 aa6.91□□□□□ -1.3
VARS-222ENST00000470953 KIAA0753Q2KHM9 967 aa6.91□□□□□ -1.3
VARS-222ENST00000470953 TPRNQ4KMQ1 711 aa6.91□□□□□ -1.3
VARS-222ENST00000470953 RARS2Q5T160 578 aaKnown RBP6.91□□□□□ -1.3
VARS-222ENST00000470953 SH3PXD2AQ5TCZ1 1133 aa6.91□□□□□ -1.3
VARS-222ENST00000470953 KIAA1841Q6NSI8 718 aa6.91□□□□□ -1.3
VARS-222ENST00000470953 XRRA1Q6P2D8 792 aa6.91□□□□□ -1.3
VARS-222ENST00000470953 CCDC62Q6P9F0 684 aa6.91□□□□□ -1.3
VARS-222ENST00000470953 CTR9Q6PD62 1173 aa6.91□□□□□ -1.3
VARS-222ENST00000470953 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.91□□□□□ -1.3
VARS-222ENST00000470953 SERINC5Q86VE9 423 aa6.91□□□□□ -1.3
VARS-222ENST00000470953 CELF5Q8N6W0 485 aaKnown RBP6.91□□□□□ -1.3
VARS-222ENST00000470953 C12orf76Q8N812 135 aaPredicted RBP6.91□□□□□ -1.3
VARS-222ENST00000470953 C12orf50Q8NA57 414 aaPredicted RBP6.91□□□□□ -1.3
VARS-222ENST00000470953 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.91□□□□□ -1.3
VARS-222ENST00000470953 SCFD2Q8WU76 684 aa6.91□□□□□ -1.3
VARS-222ENST00000470953 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.91□□□□□ -1.3
VARS-222ENST00000470953 AAASQ9NRG9 546 aa6.91□□□□□ -1.3
VARS-222ENST00000470953 MTF2Q9Y483 593 aaPredicted RBP6.91□□□□□ -1.3
VARS-222ENST00000470953 MYH7P12883 1935 aa6.91□□□□□ -1.3
VARS-222ENST00000470953 MYH4Q9Y623 1939 aa6.91□□□□□ -1.3
VARS-222ENST00000470953 TTC3P53804 2025 aa6.91□□□□□ -1.3
VARS-222ENST00000470953 GOLIM4O00461 696 aa6.9□□□□□ -1.3
VARS-222ENST00000470953 ENPP3O14638 875 aa6.9□□□□□ -1.3
VARS-222ENST00000470953 BMP3P12645 472 aa6.9□□□□□ -1.3
VARS-222ENST00000470953 CALML3P27482 149 aa6.9□□□□□ -1.3
VARS-222ENST00000470953 GATMP50440 423 aa6.9□□□□□ -1.3
VARS-222ENST00000470953 STAT2P52630 851 aa6.9□□□□□ -1.3
VARS-222ENST00000470953 SCAPQ12770 1279 aa6.9□□□□□ -1.3
VARS-222ENST00000470953 TKFCQ3LXA3 575 aa6.9□□□□□ -1.3
VARS-222ENST00000470953 COLEC12Q5KU26 742 aa6.9□□□□□ -1.3
VARS-222ENST00000470953 PLPP4Q5VZY2 271 aa6.9□□□□□ -1.3
VARS-222ENST00000470953 SLFN13Q68D06 897 aa6.9□□□□□ -1.3
VARS-222ENST00000470953 DCLRE1AQ6PJP8 1040 aa6.9□□□□□ -1.3
VARS-222ENST00000470953 RASGRP4Q8TDF6 673 aa6.9□□□□□ -1.3
VARS-222ENST00000470953 SPIRE2Q8WWL2 714 aa6.9□□□□□ -1.3
VARS-222ENST00000470953 MKL1Q969V6 931 aa6.9□□□□□ -1.3
VARS-222ENST00000470953 ACSF2Q96CM8 615 aaPredicted RBP6.9□□□□□ -1.3
VARS-222ENST00000470953 CEP95Q96GE4 821 aa6.9□□□□□ -1.3
VARS-222ENST00000470953 DDRGK1Q96HY6 314 aa6.9□□□□□ -1.3
VARS-222ENST00000470953 SCUBE2Q9NQ36 999 aa6.9□□□□□ -1.3
VARS-222ENST00000470953 PRMT8Q9NR22 394 aaPredicted RBP6.9□□□□□ -1.3
VARS-222ENST00000470953 RAXQ9Y2V3 346 aa6.9□□□□□ -1.3
VARS-222ENST00000470953 DOPEY2Q9Y3R5 2298 aa6.89□□□□□ -1.31
VARS-222ENST00000470953 APC2O95996 2303 aa6.89□□□□□ -1.31
VARS-222ENST00000470953 PTPDC1A2A3K4 754 aa6.89□□□□□ -1.31
VARS-222ENST00000470953 FSCN2O14926 492 aa6.89□□□□□ -1.31
VARS-222ENST00000470953 TREHO43280 583 aa6.89□□□□□ -1.31
VARS-222ENST00000470953 DGKIO75912 1065 aa6.89□□□□□ -1.31
VARS-222ENST00000470953 MBD4O95243 580 aa6.89□□□□□ -1.31
VARS-222ENST00000470953 WISP1O95388 367 aa6.89□□□□□ -1.31
VARS-222ENST00000470953 F2P00734 622 aa6.89□□□□□ -1.31
VARS-222ENST00000470953 SRFP11831 508 aa6.89□□□□□ -1.31
VARS-222ENST00000470953 TDGF1P13385 188 aa6.89□□□□□ -1.31
VARS-222ENST00000470953 CASTP20810 708 aaKnown RBP6.89□□□□□ -1.31
VARS-222ENST00000470953 PDE4DQ08499 809 aa6.89□□□□□ -1.31
VARS-222ENST00000470953 APOBRQ0VD83 1088 aa6.89□□□□□ -1.31
VARS-222ENST00000470953 SRSF5Q13243 272 aaKnown RBP6.89□□□□□ -1.31
VARS-222ENST00000470953 SIM2Q14190 667 aaPredicted RBP6.89□□□□□ -1.31
VARS-222ENST00000470953 PAN2Q504Q3 1202 aaKnown RBP6.89□□□□□ -1.31
VARS-222ENST00000470953 TMED8Q6PL24 325 aaPredicted RBP6.89□□□□□ -1.31
VARS-222ENST00000470953 KCTD1Q719H9 257 aa6.89□□□□□ -1.31
VARS-222ENST00000470953 DHX37Q8IY37 1157 aaKnown RBP6.89□□□□□ -1.31
VARS-222ENST00000470953 AMOTL1Q8IY63 956 aa6.89□□□□□ -1.31
VARS-222ENST00000470953 GMCL1P1Q8NEA9 526 aa6.89□□□□□ -1.31
VARS-222ENST00000470953 CLEC4DQ8WXI8 215 aa6.89□□□□□ -1.31
VARS-222ENST00000470953 CASP10Q92851 521 aa6.89□□□□□ -1.31
VARS-222ENST00000470953 SMOC1Q9H4F8 434 aa6.89□□□□□ -1.31
VARS-222ENST00000470953 PAG1Q9NWQ8 432 aa6.89□□□□□ -1.31
VARS-222ENST00000470953 IGSF9Q9P2J2 1179 aa6.89□□□□□ -1.31
VARS-222ENST00000470953 ADD3Q9UEY8 706 aaKnown RBP6.89□□□□□ -1.31
VARS-222ENST00000470953 CCPG1Q9ULG6 757 aa6.89□□□□□ -1.31
VARS-222ENST00000470953 PRR12Q9ULL5 1215 aa6.89□□□□□ -1.31
VARS-222ENST00000470953 ISY1Q9ULR0 285 aaKnown RBP6.89□□□□□ -1.31
VARS-222ENST00000470953 SUPT16HQ9Y5B9 1047 aaKnown RBP6.89□□□□□ -1.31
VARS-222ENST00000470953 FRMPD2Q68DX3 1309 aaPredicted RBP6.89□□□□□ -1.31
VARS-222ENST00000470953 ACACAQ13085 2346 aa6.88□□□□□ -1.31
VARS-222ENST00000470953 PTPRQQ9UMZ3 2332 aa6.88□□□□□ -1.31
VARS-222ENST00000470953 MYH7BA7E2Y1 1941 aa6.88□□□□□ -1.31
VARS-222ENST00000470953 HIDE1A8MVS5 230 aa6.88□□□□□ -1.31
VARS-222ENST00000470953 SMARCA5O60264 1052 aaPredicted RBP6.88□□□□□ -1.31
VARS-222ENST00000470953 SORBS3O60504 671 aa6.88□□□□□ -1.31
VARS-222ENST00000470953 GH1P01241 217 aa6.88□□□□□ -1.31
VARS-222ENST00000470953 MCCP23508 829 aa6.88□□□□□ -1.31
VARS-222ENST00000470953 STARD6P59095 220 aa6.88□□□□□ -1.31
VARS-222ENST00000470953 IKQ13123 557 aaPredicted RBP6.88□□□□□ -1.31
VARS-222ENST00000470953 DGKDQ16760 1214 aa6.88□□□□□ -1.31
VARS-222ENST00000470953 ATAT1Q5SQI0 421 aa6.88□□□□□ -1.31
VARS-222ENST00000470953 ZSCAN25Q6NSZ9 544 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms