RNA–Protein interactions for RNA: ENST00000470432.5

ECM1-204, Transcript of extracellular matrix protein 1, humanhuman

TSL 2

Gene ECM1, Length 3,066 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-204ENST00000470432 GRIK5Q16478 980 aa13.22□□□□□ -0.29
ECM1-204ENST00000470432 SEC16BQ96JE7 1060 aa13.22□□□□□ -0.29
ECM1-204ENST00000470432 SPAG5Q96R06 1193 aa13.22□□□□□ -0.29
ECM1-204ENST00000470432 RTFDC1Q9BY42 306 aaPredicted RBP13.22□□□□□ -0.29
ECM1-204ENST00000470432 OSBPL7Q9BZF2 842 aa13.22□□□□□ -0.29
ECM1-204ENST00000470432 BCCIPQ9P287 314 aaKnown RBP eCLIP13.22□□□□□ -0.29
ECM1-204ENST00000470432 SUCLA2Q9P2R7 463 aaPredicted RBP13.22□□□□□ -0.29
ECM1-204ENST00000470432 PCDHA12Q9UN75 941 aa13.22□□□□□ -0.29
ECM1-204ENST00000470432 COL5A3P25940 1745 aaPredicted RBP13.22□□□□□ -0.29
ECM1-204ENST00000470432 PLA2G4BP0C869 781 aa13.22□□□□□ -0.29
ECM1-204ENST00000470432 PPP1R18Q6NYC8 613 aa13.22□□□□□ -0.29
ECM1-204ENST00000470432 PEX26Q7Z412 305 aa13.22□□□□□ -0.29
ECM1-204ENST00000470432 TMC3Q7Z5M5 1100 aa13.22□□□□□ -0.29
ECM1-204ENST00000470432 FRMD5Q7Z6J6 570 aa13.22□□□□□ -0.29
ECM1-204ENST00000470432 MARCH10Q8NA82 808 aaPredicted RBP13.22□□□□□ -0.29
ECM1-204ENST00000470432 RAPGEF5Q92565 580 aa13.22□□□□□ -0.29
ECM1-204ENST00000470432 GOLPH3Q9H4A6 298 aa13.22□□□□□ -0.29
ECM1-204ENST00000470432 CNOT8Q9UFF9 292 aaKnown RBP13.22□□□□□ -0.29
ECM1-204ENST00000470432 HDAC9Q9UKV0 1011 aa13.22□□□□□ -0.29
ECM1-204ENST00000470432 STXBP5LQ9Y2K9 1186 aa13.22□□□□□ -0.29
ECM1-204ENST00000470432 CDK5RAP2Q96SN8 1893 aa13.22□□□□□ -0.29
ECM1-204ENST00000470432 A0A0A6YYK5 440 aaPredicted RBP13.21□□□□□ -0.29
ECM1-204ENST00000470432 DAPK3O43293 454 aa13.21□□□□□ -0.29
ECM1-204ENST00000470432 MARCH6O60337 910 aa13.21□□□□□ -0.29
ECM1-204ENST00000470432 ACTN1P12814 892 aa13.21□□□□□ -0.29
ECM1-204ENST00000470432 FLT3P36888 993 aa13.21□□□□□ -0.29
ECM1-204ENST00000470432 QPCTQ16769 361 aa13.21□□□□□ -0.29
ECM1-204ENST00000470432 ASPRV1Q53RT3 343 aa13.21□□□□□ -0.29
ECM1-204ENST00000470432 ANKRD20A8PQ5CZ79 823 aa13.21□□□□□ -0.29
ECM1-204ENST00000470432 SYCE1Q8N0S2 351 aa13.21□□□□□ -0.29
ECM1-204ENST00000470432 P3H4Q92791 437 aa13.21□□□□□ -0.29
ECM1-204ENST00000470432 FAM114A2Q9NRY5 505 aa13.21□□□□□ -0.29
ECM1-204ENST00000470432 AMACRQ9UHK6 382 aa13.21□□□□□ -0.29
ECM1-204ENST00000470432 NENFQ9UMX5 172 aa13.21□□□□□ -0.29
ECM1-204ENST00000470432 NOVA2Q9UNW9 492 aaKnown RBP13.21□□□□□ -0.29
ECM1-204ENST00000470432 KIAA1024Q9UPX6 916 aa13.21□□□□□ -0.29
ECM1-204ENST00000470432 LEMD3Q9Y2U8 911 aa13.21□□□□□ -0.29
ECM1-204ENST00000470432 FRMPD2Q68DX3 1309 aaPredicted RBP13.21□□□□□ -0.29
ECM1-204ENST00000470432 FRMD3A2A2Y4 597 aa13.21□□□□□ -0.29
ECM1-204ENST00000470432 E9PMD0 336 aa13.21□□□□□ -0.29
ECM1-204ENST00000470432 SLC26A4O43511 780 aa13.21□□□□□ -0.29
ECM1-204ENST00000470432 GCFC2P16383 781 aaKnown RBP13.21□□□□□ -0.29
ECM1-204ENST00000470432 SLC9A1P19634 815 aa13.21□□□□□ -0.29
ECM1-204ENST00000470432 CLK2P49760 499 aaKnown RBP13.21□□□□□ -0.29
ECM1-204ENST00000470432 NPEPPSP55786 919 aa13.21□□□□□ -0.29
ECM1-204ENST00000470432 LACTB2Q53H82 288 aaPredicted RBP13.21□□□□□ -0.29
ECM1-204ENST00000470432 SPDYCQ5MJ68 293 aa13.21□□□□□ -0.29
ECM1-204ENST00000470432 TAX1BP1Q86VP1 789 aa13.21□□□□□ -0.29
ECM1-204ENST00000470432 CCDC50Q8IVM0 306 aa13.21□□□□□ -0.29
ECM1-204ENST00000470432 CACNA2D3Q8IZS8 1091 aa13.21□□□□□ -0.29
ECM1-204ENST00000470432 INTUQ9ULD6 942 aa13.21□□□□□ -0.29
ECM1-204ENST00000470432 MYH7BA7E2Y1 1941 aa13.21□□□□□ -0.3
ECM1-204ENST00000470432 TMCO5BA8MYB1 307 aa13.21□□□□□ -0.3
ECM1-204ENST00000470432 DNM1LO00429 736 aa13.21□□□□□ -0.3
ECM1-204ENST00000470432 NR2F2P24468 414 aa13.21□□□□□ -0.3
ECM1-204ENST00000470432 PREPLQ4J6C6 727 aaPredicted RBP13.21□□□□□ -0.3
ECM1-204ENST00000470432 GPBP1Q86WP2 473 aa13.21□□□□□ -0.3
ECM1-204ENST00000470432 TATDN2Q93075 761 aa13.21□□□□□ -0.3
ECM1-204ENST00000470432 CNOT10Q9H9A5 744 aaKnown RBP13.21□□□□□ -0.3
ECM1-204ENST00000470432 SWAP70Q9UH65 585 aa13.21□□□□□ -0.3
ECM1-204ENST00000470432 BTAF1O14981 1849 aa13.2□□□□□ -0.3
ECM1-204ENST00000470432 LY75O60449 1722 aa13.2□□□□□ -0.3
ECM1-204ENST00000470432 PITPNM2Q9BZ72 1349 aa13.2□□□□□ -0.3
ECM1-204ENST00000470432 AFPP02771 609 aaKnown RBP13.2□□□□□ -0.3
ECM1-204ENST00000470432 ITGA4P13612 1032 aa13.2□□□□□ -0.3
ECM1-204ENST00000470432 CYP11B2P19099 503 aa13.2□□□□□ -0.3
ECM1-204ENST00000470432 PON1P27169 355 aa13.2□□□□□ -0.3
ECM1-204ENST00000470432 TM4SF1P30408 202 aa13.2□□□□□ -0.3
ECM1-204ENST00000470432 BTDP43251 543 aa13.2□□□□□ -0.3
ECM1-204ENST00000470432 MAGOHP61326 146 aaKnown RBP13.2□□□□□ -0.3
ECM1-204ENST00000470432 EXOC3L4Q17RC7 722 aa13.2□□□□□ -0.3
ECM1-204ENST00000470432 WLSQ5T9L3 541 aa13.2□□□□□ -0.3
ECM1-204ENST00000470432 GKAP1Q5VSY0 366 aaPredicted RBP13.2□□□□□ -0.3
ECM1-204ENST00000470432 VPS36Q86VN1 386 aa13.2□□□□□ -0.3
ECM1-204ENST00000470432 FUKQ8N0W3 1084 aa13.2□□□□□ -0.3
ECM1-204ENST00000470432 PROCA1Q8NCQ7 364 aaPredicted RBP13.2□□□□□ -0.3
ECM1-204ENST00000470432 MAGOHBQ96A72 148 aaKnown RBP13.2□□□□□ -0.3
ECM1-204ENST00000470432 ARMCX3Q9UH62 379 aaPredicted RBP13.2□□□□□ -0.3
ECM1-204ENST00000470432 UTP11Q9Y3A2 253 aaKnown RBP13.2□□□□□ -0.3
ECM1-204ENST00000470432 GPR75-ASB3A0A0A6YYF3 556 aa13.2□□□□□ -0.3
ECM1-204ENST00000470432 PNMA6FA0A0J9YX94 578 aa13.2□□□□□ -0.3
ECM1-204ENST00000470432 NPHP3-ACAD11A0A0J9YXS1 232 aa13.2□□□□□ -0.3
ECM1-204ENST00000470432 F8VZ95 297 aa13.2□□□□□ -0.3
ECM1-204ENST00000470432 H2AFZP0C0S5 128 aa13.2□□□□□ -0.3
ECM1-204ENST00000470432 EIF3BP55884 814 aaKnown RBP13.2□□□□□ -0.3
ECM1-204ENST00000470432 DHX9Q08211 1270 aaKnown RBP13.2□□□□□ -0.3
ECM1-204ENST00000470432 BYSLQ13895 437 aaKnown RBP13.2□□□□□ -0.3
ECM1-204ENST00000470432 NEDD9Q14511 834 aa13.2□□□□□ -0.3
ECM1-204ENST00000470432 SNCBQ16143 134 aa13.2□□□□□ -0.3
ECM1-204ENST00000470432 H2AFVQ71UI9 128 aa13.2□□□□□ -0.3
ECM1-204ENST00000470432 NBPF5PQ86XG9 351 aaPredicted RBP13.2□□□□□ -0.3
ECM1-204ENST00000470432 PARP9Q8IXQ6 854 aa13.2□□□□□ -0.3
ECM1-204ENST00000470432 TEX11Q8IYF3 940 aa13.2□□□□□ -0.3
ECM1-204ENST00000470432 RBM46Q8TBY0 533 aaKnown RBP13.2□□□□□ -0.3
ECM1-204ENST00000470432 MAGEC3Q8TD91 643 aa13.2□□□□□ -0.3
ECM1-204ENST00000470432 GJA10Q969M2 543 aa13.2□□□□□ -0.3
ECM1-204ENST00000470432 SETDB2Q96T68 719 aa13.2□□□□□ -0.3
ECM1-204ENST00000470432 TTC7AQ9ULT0 858 aaPredicted RBP13.2□□□□□ -0.3
ECM1-204ENST00000470432 TRAF3IP3Q9Y228 551 aa13.2□□□□□ -0.3
ECM1-204ENST00000470432 TTI1O43156 1089 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms