RNA–Protein interactions for RNA: ENST00000470252.1

SFXN3-205, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,541 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-205ENST00000470252 NARFQ9UHQ1 456 aa14.38□□□□□ -0.11
SFXN3-205ENST00000470252 SLC12A6Q9UHW9 1150 aa14.38□□□□□ -0.11
SFXN3-205ENST00000470252 TNRC6CQ9HCJ0 1690 aaKnown RBP14.37□□□□□ -0.11
SFXN3-205ENST00000470252 PNMA6FA0A0J9YX94 578 aa14.37□□□□□ -0.11
SFXN3-205ENST00000470252 CLGNO14967 610 aa14.37□□□□□ -0.11
SFXN3-205ENST00000470252 PPP1R11O60927 126 aaPredicted RBP14.37□□□□□ -0.11
SFXN3-205ENST00000470252 ITGA4P13612 1032 aa14.37□□□□□ -0.11
SFXN3-205ENST00000470252 PLCG2P16885 1265 aa14.37□□□□□ -0.11
SFXN3-205ENST00000470252 CLK2P49760 499 aaKnown RBP14.37□□□□□ -0.11
SFXN3-205ENST00000470252 MTMR3Q13615 1198 aa14.37□□□□□ -0.11
SFXN3-205ENST00000470252 PPP4R3CPQ6ZMV5 832 aa14.37□□□□□ -0.11
SFXN3-205ENST00000470252 ADGRF4Q8IZF3 695 aa14.37□□□□□ -0.11
SFXN3-205ENST00000470252 JMJD4Q9H9V9 463 aa14.37□□□□□ -0.11
SFXN3-205ENST00000470252 ARMCX3Q9UH62 379 aaPredicted RBP14.37□□□□□ -0.11
SFXN3-205ENST00000470252 DDX20Q9UHI6 824 aaKnown RBP14.37□□□□□ -0.11
SFXN3-205ENST00000470252 NOVA2Q9UNW9 492 aaKnown RBP14.37□□□□□ -0.11
SFXN3-205ENST00000470252 LOC102724159A0A0B4J2E5 919 aa14.37□□□□□ -0.11
SFXN3-205ENST00000470252 CCDC188H7C350 402 aa14.37□□□□□ -0.11
SFXN3-205ENST00000470252 TRAPPC3O43617 180 aa14.37□□□□□ -0.11
SFXN3-205ENST00000470252 FLOT1O75955 427 aa14.37□□□□□ -0.11
SFXN3-205ENST00000470252 AFPP02771 609 aaKnown RBP14.37□□□□□ -0.11
SFXN3-205ENST00000470252 CASP5P51878 434 aa14.37□□□□□ -0.11
SFXN3-205ENST00000470252 PPP2R2AP63151 447 aa14.37□□□□□ -0.11
SFXN3-205ENST00000470252 DDR1Q08345 913 aa14.37□□□□□ -0.11
SFXN3-205ENST00000470252 PLCB4Q15147 1175 aa14.37□□□□□ -0.11
SFXN3-205ENST00000470252 PWP2Q15269 919 aaKnown RBP14.37□□□□□ -0.11
SFXN3-205ENST00000470252 QPCTQ16769 361 aa14.37□□□□□ -0.11
SFXN3-205ENST00000470252 EXOC3L4Q17RC7 722 aa14.37□□□□□ -0.11
SFXN3-205ENST00000470252 DCAF17Q5H9S7 520 aaPredicted RBP14.37□□□□□ -0.11
SFXN3-205ENST00000470252 DPY19L2P1Q6NXN4 242 aa14.37□□□□□ -0.11
SFXN3-205ENST00000470252 RBM46Q8TBY0 533 aaKnown RBP14.37□□□□□ -0.11
SFXN3-205ENST00000470252 JPH2Q9BR39 696 aaPredicted RBP14.37□□□□□ -0.11
SFXN3-205ENST00000470252 THRAP3Q9Y2W1 955 aaKnown RBP14.37□□□□□ -0.11
SFXN3-205ENST00000470252 BHMG1C9JSJ3 638 aaPredicted RBP14.36□□□□□ -0.11
SFXN3-205ENST00000470252 GCFC2P16383 781 aaKnown RBP14.36□□□□□ -0.11
SFXN3-205ENST00000470252 PON1P27169 355 aa14.36□□□□□ -0.11
SFXN3-205ENST00000470252 MRPL12P52815 198 aaKnown RBP14.36□□□□□ -0.11
SFXN3-205ENST00000470252 SMTNP53814 917 aa14.36□□□□□ -0.11
SFXN3-205ENST00000470252 DRP2Q13474 957 aa14.36□□□□□ -0.11
SFXN3-205ENST00000470252 PPP1R18Q6NYC8 613 aa14.36□□□□□ -0.11
SFXN3-205ENST00000470252 CD248Q9HCU0 757 aa14.36□□□□□ -0.11
SFXN3-205ENST00000470252 KLC4Q9NSK0 619 aa14.36□□□□□ -0.11
SFXN3-205ENST00000470252 CNOT8Q9UFF9 292 aaKnown RBP14.36□□□□□ -0.11
SFXN3-205ENST00000470252 GOLGA6L7A0A1B0GV03 622 aa14.36□□□□□ -0.11
SFXN3-205ENST00000470252 SOCS7O14512 581 aa14.36□□□□□ -0.11
SFXN3-205ENST00000470252 BACH1O14867 736 aa14.36□□□□□ -0.11
SFXN3-205ENST00000470252 TTI1O43156 1089 aa14.36□□□□□ -0.11
SFXN3-205ENST00000470252 ZBTB48P10074 688 aaPredicted RBP14.36□□□□□ -0.11
SFXN3-205ENST00000470252 MAP2K2P36507 400 aa14.36□□□□□ -0.11
SFXN3-205ENST00000470252 GSCP56915 257 aaPredicted RBP14.36□□□□□ -0.11
SFXN3-205ENST00000470252 RHBDL3P58872 404 aa14.36□□□□□ -0.11
SFXN3-205ENST00000470252 AGBL2Q5U5Z8 902 aa14.36□□□□□ -0.11
SFXN3-205ENST00000470252 TTBK2Q6IQ55 1244 aa14.36□□□□□ -0.11
SFXN3-205ENST00000470252 ILDR2Q71H61 639 aa14.36□□□□□ -0.11
SFXN3-205ENST00000470252 FRMD5Q7Z6J6 570 aa14.36□□□□□ -0.11
SFXN3-205ENST00000470252 DAAM2Q86T65 1068 aa14.36□□□□□ -0.11
SFXN3-205ENST00000470252 CCDC26Q8TAB7 109 aa14.36□□□□□ -0.11
SFXN3-205ENST00000470252 LMBR1Q8WVP7 490 aa14.36□□□□□ -0.11
SFXN3-205ENST00000470252 CCDC114Q96M63 670 aa14.36□□□□□ -0.11
SFXN3-205ENST00000470252 PSTPIP2Q9H939 334 aa14.36□□□□□ -0.11
SFXN3-205ENST00000470252 TRPC5Q9UL62 973 aaPredicted RBP14.36□□□□□ -0.11
SFXN3-205ENST00000470252 FOCADQ5VW36 1801 aa14.35□□□□□ -0.11
SFXN3-205ENST00000470252 CNTNAP4Q9C0A0 1308 aa14.35□□□□□ -0.11
SFXN3-205ENST00000470252 H2AFZP0C0S5 128 aa14.35□□□□□ -0.11
SFXN3-205ENST00000470252 XRCC5P13010 732 aaKnown RBP14.35□□□□□ -0.11
SFXN3-205ENST00000470252 AKR1B1P15121 316 aa14.35□□□□□ -0.11
SFXN3-205ENST00000470252 SLC16A2P36021 539 aa14.35□□□□□ -0.11
SFXN3-205ENST00000470252 STAT3P40763 770 aa14.35□□□□□ -0.11
SFXN3-205ENST00000470252 ARSHQ5FYA8 562 aa14.35□□□□□ -0.11
SFXN3-205ENST00000470252 TCERG1LQ5VWI1 586 aa14.35□□□□□ -0.11
SFXN3-205ENST00000470252 DPP8Q6V1X1 898 aaPredicted RBP14.35□□□□□ -0.11
SFXN3-205ENST00000470252 H2AFVQ71UI9 128 aa14.35□□□□□ -0.11
SFXN3-205ENST00000470252 TMC3Q7Z5M5 1100 aa14.35□□□□□ -0.11
SFXN3-205ENST00000470252 VPS36Q86VN1 386 aa14.35□□□□□ -0.11
SFXN3-205ENST00000470252 C3orf20Q8ND61 904 aa14.35□□□□□ -0.11
SFXN3-205ENST00000470252 CELF4Q9BZC1 486 aaKnown RBP14.35□□□□□ -0.11
SFXN3-205ENST00000470252 DPH5Q9H2P9 285 aa14.35□□□□□ -0.11
SFXN3-205ENST00000470252 SLITRK6Q9H5Y7 841 aa14.35□□□□□ -0.11
SFXN3-205ENST00000470252 SLC40A1Q9NP59 571 aa14.35□□□□□ -0.11
SFXN3-205ENST00000470252 POTEFA5A3E0 1075 aa14.35□□□□□ -0.11
SFXN3-205ENST00000470252 MED24O75448 989 aa14.35□□□□□ -0.11
SFXN3-205ENST00000470252 POTEIP0CG38 1075 aa14.35□□□□□ -0.11
SFXN3-205ENST00000470252 SNHG28P0DPA3 235 aa14.35□□□□□ -0.11
SFXN3-205ENST00000470252 MAGOHP61326 146 aaKnown RBP14.35□□□□□ -0.11
SFXN3-205ENST00000470252 DHX9Q08211 1270 aaKnown RBP14.35□□□□□ -0.11
SFXN3-205ENST00000470252 ZNF543Q08ER8 600 aa14.35□□□□□ -0.11
SFXN3-205ENST00000470252 GRAPQ13588 217 aa14.35□□□□□ -0.11
SFXN3-205ENST00000470252 KRT71Q3SY84 523 aa14.35□□□□□ -0.11
SFXN3-205ENST00000470252 POTEGQ6S5H5 508 aa14.35□□□□□ -0.11
SFXN3-205ENST00000470252 POTEEQ6S8J3 1075 aa14.35□□□□□ -0.11
SFXN3-205ENST00000470252 GRAPLQ8TC17 118 aaPredicted RBP14.35□□□□□ -0.11
SFXN3-205ENST00000470252 RAPGEF5Q92565 580 aa14.35□□□□□ -0.11
SFXN3-205ENST00000470252 MAGOHBQ96A72 148 aaKnown RBP14.35□□□□□ -0.11
SFXN3-205ENST00000470252 DHX36Q9H2U1 1008 aaKnown RBP14.35□□□□□ -0.11
SFXN3-205ENST00000470252 ACTR5Q9H9F9 607 aaPredicted RBP14.35□□□□□ -0.11
SFXN3-205ENST00000470252 SUCLA2Q9P2R7 463 aaPredicted RBP14.35□□□□□ -0.11
SFXN3-205ENST00000470252 AJAP1Q9UKB5 411 aaPredicted RBP14.35□□□□□ -0.11
SFXN3-205ENST00000470252 ZNF831Q5JPB2 1677 aa14.34□□□□□ -0.11
SFXN3-205ENST00000470252 FRMD3A2A2Y4 597 aa14.34□□□□□ -0.11
SFXN3-205ENST00000470252 DCDC2CA8MYV0 355 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms