RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 PNMA5Q96PV4 448 aa8.83□□□□□ -1
SMC4-212ENST00000470240 IDI2Q9BXS1 227 aa8.83□□□□□ -1
SMC4-212ENST00000470240 ANO3Q9BYT9 981 aa8.83□□□□□ -1
SMC4-212ENST00000470240 IFIH1Q9BYX4 1025 aaKnown RBP8.83□□□□□ -1
SMC4-212ENST00000470240 NHEJ1Q9H9Q4 299 aaPredicted RBP8.83□□□□□ -1
SMC4-212ENST00000470240 DDX4Q9NQI0 724 aaKnown RBP8.83□□□□□ -1
SMC4-212ENST00000470240 BLOC1S4Q9NUP1 217 aa8.83□□□□□ -1
SMC4-212ENST00000470240 COL4A3BPQ9Y5P4 624 aa8.83□□□□□ -1
SMC4-212ENST00000470240 FHOD1Q9Y613 1164 aa8.83□□□□□ -1
SMC4-212ENST00000470240 SAR1BQ9Y6B6 198 aa8.83□□□□□ -1
SMC4-212ENST00000470240 BRWD3Q6RI45 1802 aa8.82□□□□□ -1
SMC4-212ENST00000470240 MYH7BA7E2Y1 1941 aa8.82□□□□□ -1
SMC4-212ENST00000470240 A0A0U1RQG5 324 aaPredicted RBP8.82□□□□□ -1
SMC4-212ENST00000470240 TRAF5O00463 557 aa8.82□□□□□ -1
SMC4-212ENST00000470240 PLSCR1O15162 318 aa8.82□□□□□ -1
SMC4-212ENST00000470240 CALUO43852 315 aaPredicted RBP8.82□□□□□ -1
SMC4-212ENST00000470240 ECE2O60344 883 aa8.82□□□□□ -1
SMC4-212ENST00000470240 TBCAO75347 108 aaKnown RBP8.82□□□□□ -1
SMC4-212ENST00000470240 ENTPD3O75355 529 aa8.82□□□□□ -1
SMC4-212ENST00000470240 EEF2P13639 858 aaKnown RBP8.82□□□□□ -1
SMC4-212ENST00000470240 ZSCAN20P17040 1043 aaPredicted RBP8.82□□□□□ -1
SMC4-212ENST00000470240 HNRNPH3P31942 346 aaKnown RBP8.82□□□□□ -1
SMC4-212ENST00000470240 SLC16A2P36021 539 aa8.82□□□□□ -1
SMC4-212ENST00000470240 ZNF76P36508 570 aa8.82□□□□□ -1
SMC4-212ENST00000470240 ARHGAP25P42331 645 aa8.82□□□□□ -1
SMC4-212ENST00000470240 WDR4P57081 412 aaKnown RBP8.82□□□□□ -1
SMC4-212ENST00000470240 SLC9C1Q4G0N8 1177 aa8.82□□□□□ -1
SMC4-212ENST00000470240 MIIPQ5JXC2 388 aa8.82□□□□□ -1
SMC4-212ENST00000470240 SYDE2Q5VT97 1194 aa8.82□□□□□ -1
SMC4-212ENST00000470240 GPBP1Q86WP2 473 aa8.82□□□□□ -1
SMC4-212ENST00000470240 KIAA0825Q8IV33 1275 aa8.82□□□□□ -1
SMC4-212ENST00000470240 GOLGA6L1Q8N7Z2 621 aa8.82□□□□□ -1
SMC4-212ENST00000470240 LRRN4CLQ8ND94 238 aa8.82□□□□□ -1
SMC4-212ENST00000470240 RUBCNQ92622 972 aa8.82□□□□□ -1
SMC4-212ENST00000470240 GMCL1Q96IK5 515 aa8.82□□□□□ -1
SMC4-212ENST00000470240 FAM20AQ96MK3 541 aa8.82□□□□□ -1
SMC4-212ENST00000470240 CHP1Q99653 195 aa8.82□□□□□ -1
SMC4-212ENST00000470240 TTYH3Q9C0H2 523 aa8.82□□□□□ -1
SMC4-212ENST00000470240 SEMA6BQ9H3T3 888 aa8.82□□□□□ -1
SMC4-212ENST00000470240 SH2D4AQ9H788 454 aa8.82□□□□□ -1
SMC4-212ENST00000470240 ZSWIM4Q9H7M6 989 aa8.82□□□□□ -1
SMC4-212ENST00000470240 ZNF446Q9NWS9 450 aa8.82□□□□□ -1
SMC4-212ENST00000470240 FAM53CQ9NYF3 392 aa8.82□□□□□ -1
SMC4-212ENST00000470240 HDAC9Q9UKV0 1011 aa8.82□□□□□ -1
SMC4-212ENST00000470240 COL11A2P13942 1736 aaPredicted RBP8.82□□□□□ -1
SMC4-212ENST00000470240 CYP3A7-CYP3A51PA0A087WV96 503 aa8.81□□□□□ -1
SMC4-212ENST00000470240 SSU72P8A0A1W2PR75 194 aa8.81□□□□□ -1
SMC4-212ENST00000470240 CETN3O15182 167 aa8.81□□□□□ -1
SMC4-212ENST00000470240 PPP1R12BO60237 982 aaPredicted RBP8.81□□□□□ -1
SMC4-212ENST00000470240 PLA2G4BP0C869 781 aa8.81□□□□□ -1
SMC4-212ENST00000470240 BMP3P12645 472 aa8.81□□□□□ -1
SMC4-212ENST00000470240 TCP1P17987 556 aaKnown RBP8.81□□□□□ -1
SMC4-212ENST00000470240 CYP3A7P24462 503 aa8.81□□□□□ -1
SMC4-212ENST00000470240 RPL13P26373 211 aaKnown RBP8.81□□□□□ -1
SMC4-212ENST00000470240 PAFAH1B1P43034 410 aa8.81□□□□□ -1
SMC4-212ENST00000470240 ARHGAP4P98171 946 aa8.81□□□□□ -1
SMC4-212ENST00000470240 TCP10Q12799 353 aa8.81□□□□□ -1
SMC4-212ENST00000470240 TERF2Q15554 542 aa8.81□□□□□ -1
SMC4-212ENST00000470240 LONRF2Q1L5Z9 754 aa8.81□□□□□ -1
SMC4-212ENST00000470240 EDRF1Q3B7T1 1238 aa8.81□□□□□ -1
SMC4-212ENST00000470240 HERC4Q5GLZ8 1057 aaPredicted RBP8.81□□□□□ -1
SMC4-212ENST00000470240 CCDC181Q5TID7 509 aa8.81□□□□□ -1
SMC4-212ENST00000470240 SFMBT2Q5VUG0 894 aa8.81□□□□□ -1
SMC4-212ENST00000470240 TTBK2Q6IQ55 1244 aa8.81□□□□□ -1
SMC4-212ENST00000470240 TRAPPC11Q7Z392 1133 aa8.81□□□□□ -1
SMC4-212ENST00000470240 SLC51AQ86UW1 340 aa8.81□□□□□ -1
SMC4-212ENST00000470240 CLEC10AQ8IUN9 316 aa8.81□□□□□ -1
SMC4-212ENST00000470240 FMNL3Q8IVF7 1028 aa8.81□□□□□ -1
SMC4-212ENST00000470240 MSL3Q8N5Y2 521 aaKnown RBP8.81□□□□□ -1
SMC4-212ENST00000470240 SYN2Q92777 582 aaPredicted RBP8.81□□□□□ -1
SMC4-212ENST00000470240 MXD3Q9BW11 206 aa8.81□□□□□ -1
SMC4-212ENST00000470240 ZHX3Q9H4I2 956 aa8.81□□□□□ -1
SMC4-212ENST00000470240 DBNDD1Q9H9R9 158 aa8.81□□□□□ -1
SMC4-212ENST00000470240 JADE2Q9NQC1 790 aa8.81□□□□□ -1
SMC4-212ENST00000470240 FAM207AQ9NSI2 230 aaPredicted RBP8.81□□□□□ -1
SMC4-212ENST00000470240 AGPAT5Q9NUQ2 364 aa8.81□□□□□ -1
SMC4-212ENST00000470240 CEP72Q9P209 647 aa8.81□□□□□ -1
SMC4-212ENST00000470240 HERC5Q9UII4 1024 aaKnown RBP8.81□□□□□ -1
SMC4-212ENST00000470240 RAB21Q9UL25 225 aa8.81□□□□□ -1
SMC4-212ENST00000470240 PLAGL2Q9UPG8 496 aa8.81□□□□□ -1
SMC4-212ENST00000470240 KIAA1024Q9UPX6 916 aa8.81□□□□□ -1
SMC4-212ENST00000470240 DNM3Q9UQ16 869 aa8.81□□□□□ -1
SMC4-212ENST00000470240 JRKLQ9Y4A0 524 aa8.81□□□□□ -1
SMC4-212ENST00000470240 GPSM3Q9Y4H4 160 aa8.81□□□□□ -1
SMC4-212ENST00000470240 MAP4K5Q9Y4K4 846 aa8.81□□□□□ -1
SMC4-212ENST00000470240 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.81□□□□□ -11e-8■■■■■ 54.3
SMC4-212ENST00000470240 TARSL2A2RTX5 802 aaKnown RBP8.8□□□□□ -1
SMC4-212ENST00000470240 FANCGO15287 622 aa8.8□□□□□ -1
SMC4-212ENST00000470240 PPP1R11O60927 126 aaPredicted RBP8.8□□□□□ -1
SMC4-212ENST00000470240 SEC31AO94979 1220 aaKnown RBP8.8□□□□□ -1
SMC4-212ENST00000470240 APBA3O96018 575 aa8.8□□□□□ -1
SMC4-212ENST00000470240 RHOXF2BP0C7M4 288 aa8.8□□□□□ -1
SMC4-212ENST00000470240 BMP1P13497 986 aa8.8□□□□□ -1
SMC4-212ENST00000470240 GAP43P17677 238 aa8.8□□□□□ -1
SMC4-212ENST00000470240 HSPA1LP34931 641 aa8.8□□□□□ -1
SMC4-212ENST00000470240 KIF11P52732 1056 aa8.8□□□□□ -1
SMC4-212ENST00000470240 HERVK_113P62684 666 aa8.8□□□□□ -1
SMC4-212ENST00000470240 SMC1AQ14683 1233 aaKnown RBP8.8□□□□□ -1
SMC4-212ENST00000470240 IFI16Q16666 785 aaKnown RBP8.8□□□□□ -1
SMC4-212ENST00000470240 Q4G0T1 1027 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms