RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 HDAC6Q9UBN7 1215 aa14.15□□□□□ -0.14
SPTLC1-204ENST00000469778 TRPC6Q9Y210 931 aa14.15□□□□□ -0.14
SPTLC1-204ENST00000469778 VWA3AA6NCI4 1184 aa14.14□□□□□ -0.15
SPTLC1-204ENST00000469778 EVI5O60447 810 aa14.14□□□□□ -0.15
SPTLC1-204ENST00000469778 CAND2O75155 1236 aa14.14□□□□□ -0.15
SPTLC1-204ENST00000469778 CD4P01730 458 aa14.14□□□□□ -0.15
SPTLC1-204ENST00000469778 INSRRP14616 1297 aa14.14□□□□□ -0.15
SPTLC1-204ENST00000469778 ATN1P54259 1190 aaPredicted RBP14.14□□□□□ -0.15
SPTLC1-204ENST00000469778 RTP1P59025 263 aa14.14□□□□□ -0.15
SPTLC1-204ENST00000469778 CDC42EP1Q00587 391 aa14.14□□□□□ -0.15
SPTLC1-204ENST00000469778 TLE2Q04725 743 aa14.14□□□□□ -0.15
SPTLC1-204ENST00000469778 LRRC26Q2I0M4 334 aa14.14□□□□□ -0.15
SPTLC1-204ENST00000469778 FAM47CQ5HY64 1035 aa14.14□□□□□ -0.15
SPTLC1-204ENST00000469778 FOXD4L5Q5VV16 416 aaPredicted RBP14.14□□□□□ -0.15
SPTLC1-204ENST00000469778 RPAINQ86UA6 219 aa14.14□□□□□ -0.15
SPTLC1-204ENST00000469778 TRIM50Q86XT4 487 aa14.14□□□□□ -0.15
SPTLC1-204ENST00000469778 TPH2Q8IWU9 490 aa14.14□□□□□ -0.15
SPTLC1-204ENST00000469778 FAM126BQ8IXS8 530 aa14.14□□□□□ -0.15
SPTLC1-204ENST00000469778 CCDC155Q8N6L0 562 aa14.14□□□□□ -0.15
SPTLC1-204ENST00000469778 FOXD4L4Q8WXT5 416 aaPredicted RBP14.14□□□□□ -0.15
SPTLC1-204ENST00000469778 LXNQ9BS40 222 aa14.14□□□□□ -0.15
SPTLC1-204ENST00000469778 TFIP11Q9UBB9 837 aaKnown RBP14.14□□□□□ -0.15
SPTLC1-204ENST00000469778 NOD1Q9Y239 953 aa14.14□□□□□ -0.15
SPTLC1-204ENST00000469778 TELO2Q9Y4R8 837 aa14.14□□□□□ -0.15
SPTLC1-204ENST00000469778 KDM3AQ9Y4C1 1321 aa14.14□□□□□ -0.15
SPTLC1-204ENST00000469778 MBLAC1A4D2B0 266 aaPredicted RBP14.13□□□□□ -0.15
SPTLC1-204ENST00000469778 POTEMA6NI47 508 aa14.13□□□□□ -0.15
SPTLC1-204ENST00000469778 ZNF862O60290 1169 aa14.13□□□□□ -0.15
SPTLC1-204ENST00000469778 CUTAO60888 179 aa14.13□□□□□ -0.15
SPTLC1-204ENST00000469778 PARNO95453 639 aaKnown RBP14.13□□□□□ -0.15
SPTLC1-204ENST00000469778 ATP4AP20648 1035 aa14.13□□□□□ -0.15
SPTLC1-204ENST00000469778 TXLNAP40222 546 aa14.13□□□□□ -0.15
SPTLC1-204ENST00000469778 ADAM17P78536 824 aa14.13□□□□□ -0.15
SPTLC1-204ENST00000469778 PRKCEQ02156 737 aa14.13□□□□□ -0.15
SPTLC1-204ENST00000469778 DNM1Q05193 864 aaKnown RBP14.13□□□□□ -0.15
SPTLC1-204ENST00000469778 PTK7Q13308 1070 aa14.13□□□□□ -0.15
SPTLC1-204ENST00000469778 BFSP2Q13515 415 aa14.13□□□□□ -0.15
SPTLC1-204ENST00000469778 GRIK4Q16099 956 aa14.13□□□□□ -0.15
SPTLC1-204ENST00000469778 IL17AQ16552 155 aa14.13□□□□□ -0.15
SPTLC1-204ENST00000469778 PTGISQ16647 500 aa14.13□□□□□ -0.15
SPTLC1-204ENST00000469778 CSPP1Q1MSJ5 1256 aa14.13□□□□□ -0.15
SPTLC1-204ENST00000469778 TRIM60Q495X7 471 aa14.13□□□□□ -0.15
SPTLC1-204ENST00000469778 HYIQ5T013 277 aa14.13□□□□□ -0.15
SPTLC1-204ENST00000469778 CATSPER3Q86XQ3 398 aa14.13□□□□□ -0.15
SPTLC1-204ENST00000469778 NME8Q8N427 588 aa14.13□□□□□ -0.15
SPTLC1-204ENST00000469778 RETREG2Q8NC44 543 aa14.13□□□□□ -0.15
SPTLC1-204ENST00000469778 CAGE1Q8TC20 777 aa14.13□□□□□ -0.15
SPTLC1-204ENST00000469778 DPF3Q92784 378 aa14.13□□□□□ -0.15
SPTLC1-204ENST00000469778 DYDC2Q96IM9 177 aa14.13□□□□□ -0.15
SPTLC1-204ENST00000469778 CCSER1Q9C0I3 900 aa14.13□□□□□ -0.15
SPTLC1-204ENST00000469778 PRKAG2Q9UGJ0 569 aa14.13□□□□□ -0.15
SPTLC1-204ENST00000469778 FBXO2Q9UK22 296 aaPredicted RBP14.13□□□□□ -0.15
SPTLC1-204ENST00000469778 DBR1Q9UK59 544 aaKnown RBP14.13□□□□□ -0.15
SPTLC1-204ENST00000469778 PCDHA2Q9Y5H9 948 aa14.13□□□□□ -0.15
SPTLC1-204ENST00000469778 DDX11L8A8MPP1 907 aa14.12□□□□□ -0.15
SPTLC1-204ENST00000469778 PITPNM1O00562 1244 aa14.12□□□□□ -0.15
SPTLC1-204ENST00000469778 KIAA0355O15063 1070 aa14.12□□□□□ -0.15
SPTLC1-204ENST00000469778 GAS2O43903 313 aaKnown RBP14.12□□□□□ -0.15
SPTLC1-204ENST00000469778 PQBP1O60828 265 aaKnown RBP14.12□□□□□ -0.15
SPTLC1-204ENST00000469778 STBD1O95210 358 aa14.12□□□□□ -0.15
SPTLC1-204ENST00000469778 CLTBP09497 229 aa14.12□□□□□ -0.15
SPTLC1-204ENST00000469778 SPATA31C1P0DKV0 1188 aa14.12□□□□□ -0.15
SPTLC1-204ENST00000469778 MARK3P27448 753 aa14.12□□□□□ -0.15
SPTLC1-204ENST00000469778 TMOD1P28289 359 aa14.12□□□□□ -0.15
SPTLC1-204ENST00000469778 YWHABP31946 246 aaKnown RBP14.12□□□□□ -0.15
SPTLC1-204ENST00000469778 CCT6AP40227 531 aaKnown RBP14.12□□□□□ -0.15
SPTLC1-204ENST00000469778 RFC5P40937 340 aa14.12□□□□□ -0.15
SPTLC1-204ENST00000469778 CHMP4BP1P59074 171 aa14.12□□□□□ -0.15
SPTLC1-204ENST00000469778 CEBPZQ03701 1054 aaKnown RBP14.12□□□□□ -0.15
SPTLC1-204ENST00000469778 FAAP100Q0VG06 881 aa14.12□□□□□ -0.15
SPTLC1-204ENST00000469778 TARBP2Q15633 366 aaKnown RBP14.12□□□□□ -0.15
SPTLC1-204ENST00000469778 RSPH3Q86UC2 560 aa14.12□□□□□ -0.15
SPTLC1-204ENST00000469778 SERINC5Q86VE9 423 aa14.12□□□□□ -0.15
SPTLC1-204ENST00000469778 BANK1Q8NDB2 785 aa14.12□□□□□ -0.15
SPTLC1-204ENST00000469778 LMBR1Q8WVP7 490 aa14.12□□□□□ -0.15
SPTLC1-204ENST00000469778 CALML4Q96GE6 196 aa14.12□□□□□ -0.15
SPTLC1-204ENST00000469778 PYM1Q9BRP8 204 aaKnown RBP14.12□□□□□ -0.15
SPTLC1-204ENST00000469778 SETD4Q9NVD3 440 aa14.12□□□□□ -0.15
SPTLC1-204ENST00000469778 RGL1Q9NZL6 768 aa14.12□□□□□ -0.15
SPTLC1-204ENST00000469778 CCDC39Q9UFE4 941 aa14.12□□□□□ -0.15
SPTLC1-204ENST00000469778 DNM3Q9UQ16 869 aa14.12□□□□□ -0.15
SPTLC1-204ENST00000469778 ATP11BQ9Y2G3 1177 aa14.12□□□□□ -0.15
SPTLC1-204ENST00000469778 MARCKSP29966 332 aaPredicted RBP14.11□□□□□ -0.15
SPTLC1-204ENST00000469778 ME1P48163 572 aa14.11□□□□□ -0.15
SPTLC1-204ENST00000469778 DNM2P50570 870 aa14.11□□□□□ -0.15
SPTLC1-204ENST00000469778 RBL2Q08999 1139 aa14.11□□□□□ -0.15
SPTLC1-204ENST00000469778 CTTNQ14247 550 aaKnown RBP14.11□□□□□ -0.15
SPTLC1-204ENST00000469778 UGCGQ16739 394 aa14.11□□□□□ -0.15
SPTLC1-204ENST00000469778 GDF6Q6KF10 455 aaPredicted RBP14.11□□□□□ -0.15
SPTLC1-204ENST00000469778 ANO5Q75V66 913 aa14.11□□□□□ -0.15
SPTLC1-204ENST00000469778 SNX29Q8TEQ0 813 aa14.11□□□□□ -0.15
SPTLC1-204ENST00000469778 CDK5RAP3Q96JB5 506 aa14.11□□□□□ -0.15
SPTLC1-204ENST00000469778 SPATA32Q96LK8 384 aa14.11□□□□□ -0.15
SPTLC1-204ENST00000469778 TMEM39AQ9NV64 488 aa14.11□□□□□ -0.15
SPTLC1-204ENST00000469778 TUBE1Q9UJT0 475 aa14.11□□□□□ -0.15
SPTLC1-204ENST00000469778 BRCA2P51587 3418 aa14.11□□□□□ -0.15
SPTLC1-204ENST00000469778 SMIM35A0A1B0GVV1 85 aa14.1□□□□□ -0.15
SPTLC1-204ENST00000469778 ZBTB42B2RXF5 422 aa14.1□□□□□ -0.15
SPTLC1-204ENST00000469778 B4GALT4O60513 344 aa14.1□□□□□ -0.15
SPTLC1-204ENST00000469778 DGAT1O75907 488 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms