RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 NSD2O96028 1365 aa6.66□□□□□ -1.34
VPS8-219ENST00000469479 FAM86C2PA6NEL3 165 aa6.65□□□□□ -1.34
VPS8-219ENST00000469479 IMPDH2P12268 514 aa6.65□□□□□ -1.34
VPS8-219ENST00000469479 TDRD10Q5VZ19 366 aaKnown RBP6.65□□□□□ -1.34
VPS8-219ENST00000469479 SND1Q7KZF4 910 aaKnown RBP eCLIP6.65□□□□□ -1.34
VPS8-219ENST00000469479 TTLL6Q8N841 843 aa6.65□□□□□ -1.34
VPS8-219ENST00000469479 NOL6Q9H6R4 1146 aaKnown RBP6.65□□□□□ -1.34
VPS8-219ENST00000469479 RWDD3Q9Y3V2 267 aa6.65□□□□□ -1.34
VPS8-219ENST00000469479 TNRC6CQ9HCJ0 1690 aaKnown RBP6.65□□□□□ -1.35
VPS8-219ENST00000469479 FAM208AQ9UK61 1670 aaKnown RBP6.65□□□□□ -1.35
VPS8-219ENST00000469479 KIAA1210Q9ULL0 1709 aa6.64□□□□□ -1.35
VPS8-219ENST00000469479 VEGFAP15692 232 aaPredicted RBP6.64□□□□□ -1.35
VPS8-219ENST00000469479 TCEAL1Q15170 157 aa6.64□□□□□ -1.35
VPS8-219ENST00000469479 CDSNQ15517 529 aa6.64□□□□□ -1.35
VPS8-219ENST00000469479 C9orf131Q5VYM1 1079 aa6.64□□□□□ -1.35
VPS8-219ENST00000469479 LIMS2Q7Z4I7 341 aa6.64□□□□□ -1.35
VPS8-219ENST00000469479 ZCRB1Q8TBF4 217 aaKnown RBP6.64□□□□□ -1.35
VPS8-219ENST00000469479 USP33Q8TEY7 942 aa6.64□□□□□ -1.35
VPS8-219ENST00000469479 LCORQ96JN0 433 aaPredicted RBP6.64□□□□□ -1.35
VPS8-219ENST00000469479 ZDHHC15Q96MV8 337 aa6.64□□□□□ -1.35
VPS8-219ENST00000469479 MTA3Q9BTC8 594 aa6.64□□□□□ -1.35
VPS8-219ENST00000469479 ZNF747Q9BV97 191 aa6.64□□□□□ -1.35
VPS8-219ENST00000469479 KTN1Q86UP2 1357 aaKnown RBP6.64□□□□□ -1.35
VPS8-219ENST00000469479 LAMTOR5O43504 91 aa6.63□□□□□ -1.35
VPS8-219ENST00000469479 C5P01031 1676 aa6.63□□□□□ -1.35
VPS8-219ENST00000469479 C8BP07358 591 aa6.63□□□□□ -1.35
VPS8-219ENST00000469479 CTCFP49711 727 aaPredicted RBP6.63□□□□□ -1.35
VPS8-219ENST00000469479 WWC2Q6AWC2 1192 aa6.63□□□□□ -1.35
VPS8-219ENST00000469479 MCTP2Q6DN12 878 aa6.63□□□□□ -1.35
VPS8-219ENST00000469479 HS2ST1Q7LGA3 356 aa6.63□□□□□ -1.35
VPS8-219ENST00000469479 PLEKHH3Q7Z736 793 aa6.63□□□□□ -1.35
VPS8-219ENST00000469479 PPFIBP1Q86W92 1011 aa6.63□□□□□ -1.35
VPS8-219ENST00000469479 TXNDC5Q8NBS9 432 aaKnown RBP6.63□□□□□ -1.35
VPS8-219ENST00000469479 PALLDQ8WX93 1383 aa6.63□□□□□ -1.35
VPS8-219ENST00000469479 RNF34Q969K3 372 aa6.63□□□□□ -1.35
VPS8-219ENST00000469479 TM9SF2Q99805 663 aa6.63□□□□□ -1.35
VPS8-219ENST00000469479 KLC2Q9H0B6 622 aa6.63□□□□□ -1.35
VPS8-219ENST00000469479 VPS11Q9H270 941 aa6.63□□□□□ -1.35
VPS8-219ENST00000469479 GGT7Q9UJ14 662 aa6.63□□□□□ -1.35
VPS8-219ENST00000469479 ZNRF3Q9ULT6 936 aa6.63□□□□□ -1.35
VPS8-219ENST00000469479 ZNF451Q9Y4E5 1061 aa6.63□□□□□ -1.35
VPS8-219ENST00000469479 DOT1LQ8TEK3 1739 aa6.62□□□□□ -1.35
VPS8-219ENST00000469479 USP54Q70EL1 1684 aa6.62□□□□□ -1.35
VPS8-219ENST00000469479 C9orf118A6NHY6 69 aa6.62□□□□□ -1.35
VPS8-219ENST00000469479 TP53P04637 393 aaPredicted RBP6.62□□□□□ -1.35
VPS8-219ENST00000469479 MMP10P09238 476 aa6.62□□□□□ -1.35
VPS8-219ENST00000469479 DNAJC14Q6Y2X3 702 aaPredicted RBP6.62□□□□□ -1.35
VPS8-219ENST00000469479 ETV3LQ6ZN32 361 aa6.62□□□□□ -1.35
VPS8-219ENST00000469479 IP6K1Q92551 441 aa6.62□□□□□ -1.35
VPS8-219ENST00000469479 PCED1AQ9H1Q7 454 aa6.62□□□□□ -1.35
VPS8-219ENST00000469479 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.62□□□□□ -1.35
VPS8-219ENST00000469479 FBLN5Q9UBX5 448 aa6.62□□□□□ -1.35
VPS8-219ENST00000469479 RGPD5Q99666 1765 aa6.62□□□□□ -1.35
VPS8-219ENST00000469479 KCPQ6ZWJ8 1503 aa6.61□□□□□ -1.35
VPS8-219ENST00000469479 TRBV23OR9-2A0A075B6M9 112 aa6.61□□□□□ -1.35
VPS8-219ENST00000469479 AURKAO14965 403 aa6.61□□□□□ -1.35
VPS8-219ENST00000469479 RAPGEF4Q8WZA2 1011 aa6.61□□□□□ -1.35
VPS8-219ENST00000469479 RNF181Q9P0P0 153 aa6.61□□□□□ -1.35
VPS8-219ENST00000469479 C4BP0C0L5 1744 aa6.61□□□□□ -1.35
VPS8-219ENST00000469479 KAT6BQ8WYB5 2073 aa6.61□□□□□ -1.35
VPS8-219ENST00000469479 PCDH11XQ9BZA7 1347 aa6.6□□□□□ -1.35
VPS8-219ENST00000469479 PCDH11YQ9BZA8 1340 aa6.6□□□□□ -1.35
VPS8-219ENST00000469479 PPP1R11O60927 126 aaPredicted RBP6.6□□□□□ -1.35
VPS8-219ENST00000469479 RGS19P49795 217 aa6.6□□□□□ -1.35
VPS8-219ENST00000469479 SEPHS1P49903 392 aa6.6□□□□□ -1.35
VPS8-219ENST00000469479 TMF1P82094 1093 aa6.6□□□□□ -1.35
VPS8-219ENST00000469479 ICAM4Q14773 271 aa6.6□□□□□ -1.35
VPS8-219ENST00000469479 DALRD3Q5D0E6 543 aaKnown RBP6.6□□□□□ -1.35
VPS8-219ENST00000469479 ZC3H18Q86VM9 953 aaKnown RBP6.6□□□□□ -1.35
VPS8-219ENST00000469479 DCP2Q8IU60 420 aaKnown RBP6.6□□□□□ -1.35
VPS8-219ENST00000469479 PPP4R1LQ9P1A2 415 aa6.6□□□□□ -1.35
VPS8-219ENST00000469479 GULP1Q9UBP9 304 aa6.6□□□□□ -1.35
VPS8-219ENST00000469479 EDC4Q6P2E9 1401 aaKnown RBP6.59□□□□□ -1.35
VPS8-219ENST00000469479 SMG6Q86US8 1419 aaKnown RBP6.59□□□□□ -1.35
VPS8-219ENST00000469479 PKD1L3Q7Z443 1732 aa6.59□□□□□ -1.35
VPS8-219ENST00000469479 RTL1A6NKG5 1358 aa6.59□□□□□ -1.35
VPS8-219ENST00000469479 A0A0G2JLW4 131 aa6.59□□□□□ -1.35
VPS8-219ENST00000469479 NPEPPSL1A6NEC2 478 aa6.59□□□□□ -1.35
VPS8-219ENST00000469479 GLTPD2A6NH11 291 aa6.59□□□□□ -1.35
VPS8-219ENST00000469479 DDX3XO00571 662 aaKnown RBP eCLIP6.59□□□□□ -1.35
VPS8-219ENST00000469479 FOXN1O15353 648 aa6.59□□□□□ -1.35
VPS8-219ENST00000469479 AMHP03971 560 aa6.59□□□□□ -1.35
VPS8-219ENST00000469479 PPP2R5DQ14738 602 aa6.59□□□□□ -1.35
VPS8-219ENST00000469479 PRR31Q5SQ13 230 aa6.59□□□□□ -1.35
VPS8-219ENST00000469479 CD300LDQ6UXZ3 194 aa6.59□□□□□ -1.35
VPS8-219ENST00000469479 HDGFL2Q7Z4V5 671 aaPredicted RBP6.59□□□□□ -1.35
VPS8-219ENST00000469479 ABHD8Q96I13 439 aa6.59□□□□□ -1.35
VPS8-219ENST00000469479 SEMA4AQ9H3S1 761 aa6.59□□□□□ -1.35
VPS8-219ENST00000469479 DEF6Q9H4E7 631 aa6.59□□□□□ -1.35
VPS8-219ENST00000469479 CD248Q9HCU0 757 aa6.59□□□□□ -1.35
VPS8-219ENST00000469479 WHRNQ9P202 907 aa6.59□□□□□ -1.35
VPS8-219ENST00000469479 KIF13BQ9NQT8 1826 aa6.59□□□□□ -1.35
VPS8-219ENST00000469479 CNTNAP1P78357 1384 aa6.58□□□□□ -1.36
VPS8-219ENST00000469479 MAP3K19Q56UN5 1328 aa6.58□□□□□ -1.36
VPS8-219ENST00000469479 NPHS1O60500 1241 aa6.58□□□□□ -1.36
VPS8-219ENST00000469479 NTRK1P04629 796 aa6.58□□□□□ -1.36
VPS8-219ENST00000469479 DPEP1P16444 411 aa6.58□□□□□ -1.36
VPS8-219ENST00000469479 PAMP19021 973 aa6.58□□□□□ -1.36
VPS8-219ENST00000469479 UNC5AQ6ZN44 842 aa6.58□□□□□ -1.36
VPS8-219ENST00000469479 ERICH6Q7L0X2 663 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms