RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 PAFAH1B1P43034 410 aa19.58■□□□□ 0.73
MCF2L-221ENST00000469415 EXOC3L4Q17RC7 722 aa19.58■□□□□ 0.73
MCF2L-221ENST00000469415 KLHDC7AQ5VTJ3 777 aa19.58■□□□□ 0.73
MCF2L-221ENST00000469415 ELMO3Q96BJ8 720 aa19.58■□□□□ 0.73
MCF2L-221ENST00000469415 ABCB11O95342 1321 aa19.58■□□□□ 0.73
MCF2L-221ENST00000469415 LY75O60449 1722 aa19.58■□□□□ 0.72
MCF2L-221ENST00000469415 TISP43B9A030 160 aa19.58■□□□□ 0.72
MCF2L-221ENST00000469415 NR3C1P04150 777 aa19.58■□□□□ 0.72
MCF2L-221ENST00000469415 EN1Q05925 392 aaPredicted RBP19.58■□□□□ 0.72
MCF2L-221ENST00000469415 DLGAP5Q15398 846 aa19.58■□□□□ 0.72
MCF2L-221ENST00000469415 GAS7O60861 476 aa19.57■□□□□ 0.72
MCF2L-221ENST00000469415 RNF40O75150 1001 aa19.57■□□□□ 0.72
MCF2L-221ENST00000469415 AGBL1Q96MI9 1066 aa19.57■□□□□ 0.72
MCF2L-221ENST00000469415 PCIF1Q9H4Z3 704 aa19.57■□□□□ 0.72
MCF2L-221ENST00000469415 GFPT2O94808 682 aa19.57■□□□□ 0.72
MCF2L-221ENST00000469415 SERPING1P05155 500 aa19.57■□□□□ 0.72
MCF2L-221ENST00000469415 GUCY2FP51841 1108 aa19.57■□□□□ 0.72
MCF2L-221ENST00000469415 AP3B2Q13367 1082 aa19.57■□□□□ 0.72
MCF2L-221ENST00000469415 SYT2Q8N9I0 419 aaPredicted RBP19.57■□□□□ 0.72
MCF2L-221ENST00000469415 PURBQ96QR8 312 aaKnown RBP19.57■□□□□ 0.72
MCF2L-221ENST00000469415 WRAP73Q9P2S5 460 aaPredicted RBP19.57■□□□□ 0.72
MCF2L-221ENST00000469415 HNRNPH3P31942 346 aaKnown RBP19.57■□□□□ 0.72
MCF2L-221ENST00000469415 SREBF1P36956 1147 aa19.57■□□□□ 0.72
MCF2L-221ENST00000469415 ARHGAP44Q17R89 818 aa19.57■□□□□ 0.72
MCF2L-221ENST00000469415 CCDC70Q6NSX1 233 aa19.57■□□□□ 0.72
MCF2L-221ENST00000469415 FOXR1Q6PIV2 292 aa19.57■□□□□ 0.72
MCF2L-221ENST00000469415 LRRN2O75325 713 aa19.56■□□□□ 0.72
MCF2L-221ENST00000469415 UCHL3P15374 230 aa19.56■□□□□ 0.72
MCF2L-221ENST00000469415 ABCB4P21439 1286 aa19.56■□□□□ 0.72
MCF2L-221ENST00000469415 COBLL1Q53SF7 1204 aa19.56■□□□□ 0.72
MCF2L-221ENST00000469415 RINT1Q6NUQ1 792 aa19.56■□□□□ 0.72
MCF2L-221ENST00000469415 ZNF571Q7Z3V5 609 aaPredicted RBP19.56■□□□□ 0.72
MCF2L-221ENST00000469415 OGFOD1Q8N543 542 aa19.56■□□□□ 0.72
MCF2L-221ENST00000469415 GCNT4Q9P109 453 aa19.56■□□□□ 0.72
MCF2L-221ENST00000469415 CHORDC1Q9UHD1 332 aaPredicted RBP19.56■□□□□ 0.72
MCF2L-221ENST00000469415 SERPINA10Q9UK55 444 aa19.56■□□□□ 0.72
MCF2L-221ENST00000469415 SEMA3FQ13275 785 aa19.56■□□□□ 0.72
MCF2L-221ENST00000469415 CCNI2Q6ZMN8 369 aaPredicted RBP19.56■□□□□ 0.72
MCF2L-221ENST00000469415 ADAT2Q7Z6V5 191 aaKnown RBP19.56■□□□□ 0.72
MCF2L-221ENST00000469415 KRT12Q99456 494 aa19.56■□□□□ 0.72
MCF2L-221ENST00000469415 ANO9A1A5B4 782 aa19.55■□□□□ 0.72
MCF2L-221ENST00000469415 CCDC66A2RUB6 948 aa19.55■□□□□ 0.72
MCF2L-221ENST00000469415 AFPP02771 609 aaKnown RBP19.55■□□□□ 0.72
MCF2L-221ENST00000469415 CDK17Q00537 523 aa19.55■□□□□ 0.72
MCF2L-221ENST00000469415 ASTE1Q2TB18 679 aaPredicted RBP19.55■□□□□ 0.72
MCF2L-221ENST00000469415 C8orf74Q6P047 294 aa19.55■□□□□ 0.72
MCF2L-221ENST00000469415 CEP63Q96MT8 703 aa19.55■□□□□ 0.72
MCF2L-221ENST00000469415 VAV3Q9UKW4 847 aa19.55■□□□□ 0.72
MCF2L-221ENST00000469415 MYH4Q9Y623 1939 aa19.55■□□□□ 0.72
MCF2L-221ENST00000469415 KCNK3O14649 394 aa19.55■□□□□ 0.72
MCF2L-221ENST00000469415 SLITRK3O94933 977 aa19.55■□□□□ 0.72
MCF2L-221ENST00000469415 ZSCAN26Q16670 478 aa19.55■□□□□ 0.72
MCF2L-221ENST00000469415 RBM46Q8TBY0 533 aaKnown RBP19.55■□□□□ 0.72
MCF2L-221ENST00000469415 ARHGEF10LQ9HCE6 1279 aa19.55■□□□□ 0.72
MCF2L-221ENST00000469415 MYO3BQ8WXR4 1341 aa19.55■□□□□ 0.72
MCF2L-221ENST00000469415 GCOM1H8Y6P7 765 aaPredicted RBP19.54■□□□□ 0.72
MCF2L-221ENST00000469415 POLR2MP0CAP2 368 aa19.54■□□□□ 0.72
MCF2L-221ENST00000469415 PON1P27169 355 aa19.54■□□□□ 0.72
MCF2L-221ENST00000469415 SP4Q02446 784 aa19.54■□□□□ 0.72
MCF2L-221ENST00000469415 ODR4Q5SWX8 454 aa19.54■□□□□ 0.72
MCF2L-221ENST00000469415 HYIQ5T013 277 aa19.54■□□□□ 0.72
MCF2L-221ENST00000469415 WDR93Q6P2C0 686 aa19.54■□□□□ 0.72
MCF2L-221ENST00000469415 SYCP3Q8IZU3 236 aa19.54■□□□□ 0.72
MCF2L-221ENST00000469415 ZNF577Q9BSK1 485 aa19.54■□□□□ 0.72
MCF2L-221ENST00000469415 AP1M1Q9BXS5 423 aa19.54■□□□□ 0.72
MCF2L-221ENST00000469415 GLT8D2Q9H1C3 349 aa19.54■□□□□ 0.72
MCF2L-221ENST00000469415 HPCAL4Q9UM19 191 aa19.54■□□□□ 0.72
MCF2L-221ENST00000469415 FZD1Q9UP38 647 aa19.54■□□□□ 0.72
MCF2L-221ENST00000469415 SCN9AQ15858 1988 aa19.54■□□□□ 0.72
MCF2L-221ENST00000469415 GUCY2DQ02846 1103 aa19.54■□□□□ 0.72
MCF2L-221ENST00000469415 U2AF1L4Q8WU68 220 aaKnown RBP19.54■□□□□ 0.72
MCF2L-221ENST00000469415 CYP3A7-CYP3A51PA0A087WV96 503 aa19.54■□□□□ 0.72
MCF2L-221ENST00000469415 CYP3A7P24462 503 aa19.54■□□□□ 0.72
MCF2L-221ENST00000469415 NAA35Q5VZE5 725 aa19.54■□□□□ 0.72
MCF2L-221ENST00000469415 KCTD16Q68DU8 428 aa19.54■□□□□ 0.72
MCF2L-221ENST00000469415 NAP1L4Q99733 375 aaKnown RBP19.54■□□□□ 0.72
MCF2L-221ENST00000469415 ASTN1O14525 1302 aa19.53■□□□□ 0.72
MCF2L-221ENST00000469415 EPB41P11171 864 aaKnown RBP19.53■□□□□ 0.72
MCF2L-221ENST00000469415 USP8P40818 1118 aa19.53■□□□□ 0.72
MCF2L-221ENST00000469415 LLGL1Q15334 1064 aa19.53■□□□□ 0.72
MCF2L-221ENST00000469415 SLC18A3Q16572 532 aa19.53■□□□□ 0.72
MCF2L-221ENST00000469415 MAP9Q49MG5 647 aa19.53■□□□□ 0.72
MCF2L-221ENST00000469415 GOLGA6L1Q8N7Z2 621 aa19.53■□□□□ 0.72
MCF2L-221ENST00000469415 GMCL1Q96IK5 515 aa19.53■□□□□ 0.72
MCF2L-221ENST00000469415 GANQ9H2C0 597 aa19.53■□□□□ 0.72
MCF2L-221ENST00000469415 EPB41L5Q9HCM4 733 aa19.53■□□□□ 0.72
MCF2L-221ENST00000469415 ZNF70Q9UC06 446 aaPredicted RBP19.53■□□□□ 0.72
MCF2L-221ENST00000469415 NFU1Q9UMS0 254 aa19.53■□□□□ 0.72
MCF2L-221ENST00000469415 FOSP01100 380 aaPredicted RBP19.53■□□□□ 0.72
MCF2L-221ENST00000469415 NBPF9Q3BBW0 867 aa19.53■□□□□ 0.72
MCF2L-221ENST00000469415 OTOP1Q7RTM1 612 aa19.53■□□□□ 0.72
MCF2L-221ENST00000469415 CRYGNQ8WXF5 182 aa19.53■□□□□ 0.72
MCF2L-221ENST00000469415 CEP104O60308 925 aa19.52■□□□□ 0.72
MCF2L-221ENST00000469415 SYF2O95926 243 aaKnown RBP19.52■□□□□ 0.72
MCF2L-221ENST00000469415 GLI1P08151 1106 aa19.52■□□□□ 0.72
MCF2L-221ENST00000469415 TCP1P17987 556 aaKnown RBP19.52■□□□□ 0.72
MCF2L-221ENST00000469415 FAM178BQ8IXR5 827 aa19.52■□□□□ 0.72
MCF2L-221ENST00000469415 CNKSR1Q969H4 720 aa19.52■□□□□ 0.72
MCF2L-221ENST00000469415 CENPHQ9H3R5 247 aa19.52■□□□□ 0.72
MCF2L-221ENST00000469415 CALUO43852 315 aaPredicted RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms