RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 RBM12BQ8IXT5 1001 aaKnown RBP7.1□□□□□ -1.27
LSM5-209ENST00000468872 IGSF22Q8N9C0 903 aa7.1□□□□□ -1.27
LSM5-209ENST00000468872 UHMK1Q8TAS1 419 aaKnown RBP7.1□□□□□ -1.27
LSM5-209ENST00000468872 STAG1Q8WVM7 1258 aa7.1□□□□□ -1.27
LSM5-209ENST00000468872 ZCCHC14Q8WYQ9 949 aaKnown RBP7.1□□□□□ -1.27
LSM5-209ENST00000468872 WRNIP1Q96S55 665 aa7.1□□□□□ -1.27
LSM5-209ENST00000468872 IPPKQ9H8X2 491 aa7.1□□□□□ -1.27
LSM5-209ENST00000468872 SAMD15Q9P1V8 674 aa7.1□□□□□ -1.27
LSM5-209ENST00000468872 COQ6Q9Y2Z9 468 aa7.1□□□□□ -1.27
LSM5-209ENST00000468872 B4GALT3O60512 393 aa7.09□□□□□ -1.27
LSM5-209ENST00000468872 EYA4O95677 639 aa7.09□□□□□ -1.27
LSM5-209ENST00000468872 GNAT1P11488 350 aa7.09□□□□□ -1.27
LSM5-209ENST00000468872 CDK11BP21127 795 aaKnown RBP7.09□□□□□ -1.27
LSM5-209ENST00000468872 MAGEA10P43363 369 aaPredicted RBP7.09□□□□□ -1.27
LSM5-209ENST00000468872 SPIRE1Q08AE8 756 aa7.09□□□□□ -1.27
LSM5-209ENST00000468872 TUSC3Q13454 348 aa7.09□□□□□ -1.27
LSM5-209ENST00000468872 HABP4Q5JVS0 413 aaKnown RBP7.09□□□□□ -1.27
LSM5-209ENST00000468872 DDX53Q86TM3 631 aaKnown RBP7.09□□□□□ -1.27
LSM5-209ENST00000468872 TMEM168Q9H0V1 697 aa7.09□□□□□ -1.27
LSM5-209ENST00000468872 DDX56Q9NY93 547 aaKnown RBP7.09□□□□□ -1.27
LSM5-209ENST00000468872 CBX4O00257 560 aa7.08□□□□□ -1.28
LSM5-209ENST00000468872 NKRFO15226 690 aaKnown RBP eCLIP7.08□□□□□ -1.28
LSM5-209ENST00000468872 LTFP02788 710 aa7.08□□□□□ -1.28
LSM5-209ENST00000468872 APPP05067 770 aa7.08□□□□□ -1.28
LSM5-209ENST00000468872 STRN3Q13033 797 aa7.08□□□□□ -1.28
LSM5-209ENST00000468872 DHCR24Q15392 516 aa7.08□□□□□ -1.28
LSM5-209ENST00000468872 VASNQ6EMK4 673 aa7.08□□□□□ -1.28
LSM5-209ENST00000468872 MBD6Q96DN6 1003 aa7.08□□□□□ -1.28
LSM5-209ENST00000468872 BORCS6Q96GS4 357 aa7.08□□□□□ -1.28
LSM5-209ENST00000468872 WNK4Q96J92 1243 aa7.08□□□□□ -1.28
LSM5-209ENST00000468872 ORAI3Q9BRQ5 295 aa7.08□□□□□ -1.28
LSM5-209ENST00000468872 KRTAP4-5Q9BYR2 181 aa7.08□□□□□ -1.28
LSM5-209ENST00000468872 CELF4Q9BZC1 486 aaKnown RBP7.08□□□□□ -1.28
LSM5-209ENST00000468872 PDGFDQ9GZP0 370 aaPredicted RBP7.08□□□□□ -1.28
LSM5-209ENST00000468872 SMPD4Q9NXE4 827 aa7.08□□□□□ -1.28
LSM5-209ENST00000468872 TELO2Q9Y4R8 837 aa7.08□□□□□ -1.28
LSM5-209ENST00000468872 CCDC66A2RUB6 948 aa7.07□□□□□ -1.28
LSM5-209ENST00000468872 FAM47E-STBD1D6RA91 191 aa7.07□□□□□ -1.28
LSM5-209ENST00000468872 M0R2C6 588 aa7.07□□□□□ -1.28
LSM5-209ENST00000468872 PYGMP11217 842 aa7.07□□□□□ -1.28
LSM5-209ENST00000468872 FAHP16930 419 aa7.07□□□□□ -1.28
LSM5-209ENST00000468872 TRMT10BQ6PF06 316 aaKnown RBP7.07□□□□□ -1.28
LSM5-209ENST00000468872 DTX3Q8N9I9 347 aa7.07□□□□□ -1.28
LSM5-209ENST00000468872 ATL2Q8NHH9 583 aa7.07□□□□□ -1.28
LSM5-209ENST00000468872 FBXW5Q969U6 566 aa7.07□□□□□ -1.28
LSM5-209ENST00000468872 DLL4Q9NR61 685 aa7.07□□□□□ -1.28
LSM5-209ENST00000468872 FTSJ1Q9UET6 329 aa7.07□□□□□ -1.28
LSM5-209ENST00000468872 MCM8Q9UJA3 840 aa7.07□□□□□ -1.28
LSM5-209ENST00000468872 DSEQ9UL01 958 aa7.07□□□□□ -1.28
LSM5-209ENST00000468872 CBLCQ9ULV8 474 aa7.07□□□□□ -1.28
LSM5-209ENST00000468872 NUB1Q9Y5A7 615 aa7.07□□□□□ -1.28
LSM5-209ENST00000468872 ZNF536O15090 1300 aa7.06□□□□□ -1.28
LSM5-209ENST00000468872 ZNF891A8MT65 544 aaPredicted RBP7.06□□□□□ -1.28
LSM5-209ENST00000468872 TRAF5O00463 557 aa7.06□□□□□ -1.28
LSM5-209ENST00000468872 COL6A1P12109 1028 aa7.06□□□□□ -1.28
LSM5-209ENST00000468872 DNM2P50570 870 aa7.06□□□□□ -1.28
LSM5-209ENST00000468872 PAN2Q504Q3 1202 aaKnown RBP7.06□□□□□ -1.28
LSM5-209ENST00000468872 TMEM177Q53S58 311 aa7.06□□□□□ -1.28
LSM5-209ENST00000468872 PHF19Q5T6S3 580 aa7.06□□□□□ -1.28
LSM5-209ENST00000468872 LHFPL2Q6ZUX7 228 aa7.06□□□□□ -1.28
LSM5-209ENST00000468872 OVCH1Q7RTY7 1134 aa7.06□□□□□ -1.28
LSM5-209ENST00000468872 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.06□□□□□ -1.28
LSM5-209ENST00000468872 SAMD11Q96NU1 681 aa7.06□□□□□ -1.28
LSM5-209ENST00000468872 SSBP3Q9BWW4 388 aaPredicted RBP7.06□□□□□ -1.28
LSM5-209ENST00000468872 PDGFRBP09619 1106 aa7.05□□□□□ -1.28
LSM5-209ENST00000468872 MECP2P51608 486 aaKnown RBP7.05□□□□□ -1.28
LSM5-209ENST00000468872 EPHA5P54756 1037 aa7.05□□□□□ -1.28
LSM5-209ENST00000468872 ADAM17P78536 824 aa7.05□□□□□ -1.28
LSM5-209ENST00000468872 DSG1Q02413 1049 aa7.05□□□□□ -1.28
LSM5-209ENST00000468872 SURF1Q15526 300 aa7.05□□□□□ -1.28
LSM5-209ENST00000468872 ZXDCQ2QGD7 858 aaPredicted RBP7.05□□□□□ -1.28
LSM5-209ENST00000468872 FAM47CQ5HY64 1035 aa7.05□□□□□ -1.28
LSM5-209ENST00000468872 C16orf59Q7L2K0 433 aa7.05□□□□□ -1.28
LSM5-209ENST00000468872 PLEKHH3Q7Z736 793 aa7.05□□□□□ -1.28
LSM5-209ENST00000468872 KIF18BQ86Y91 864 aa7.05□□□□□ -1.28
LSM5-209ENST00000468872 NXPE1Q8N323 547 aa7.05□□□□□ -1.28
LSM5-209ENST00000468872 CISD2Q8N5K1 135 aaKnown RBP7.05□□□□□ -1.28
LSM5-209ENST00000468872 OR2W6PQ8NHA6 318 aa7.05□□□□□ -1.28
LSM5-209ENST00000468872 LOXL4Q96JB6 756 aa7.05□□□□□ -1.28
LSM5-209ENST00000468872 GPR20Q99678 358 aa7.05□□□□□ -1.28
LSM5-209ENST00000468872 HOMER2Q9NSB8 354 aa7.05□□□□□ -1.28
LSM5-209ENST00000468872 TYW1Q9NV66 732 aaKnown RBP7.05□□□□□ -1.28
LSM5-209ENST00000468872 LAMTOR5O43504 91 aa7.04□□□□□ -1.28
LSM5-209ENST00000468872 F2P00734 622 aa7.04□□□□□ -1.28
LSM5-209ENST00000468872 INSRRP14616 1297 aa7.04□□□□□ -1.28
LSM5-209ENST00000468872 BPIP17213 487 aa7.04□□□□□ -1.28
LSM5-209ENST00000468872 ST5P78524 1137 aa7.04□□□□□ -1.28
LSM5-209ENST00000468872 STAT4Q14765 748 aa7.04□□□□□ -1.28
LSM5-209ENST00000468872 PLEKHG6Q3KR16 790 aa7.04□□□□□ -1.28
LSM5-209ENST00000468872 CD276Q5ZPR3 534 aa7.04□□□□□ -1.28
LSM5-209ENST00000468872 GLB1LQ6UWU2 654 aa7.04□□□□□ -1.28
LSM5-209ENST00000468872 KCTD1Q719H9 257 aa7.04□□□□□ -1.28
LSM5-209ENST00000468872 LIMS2Q7Z4I7 341 aa7.04□□□□□ -1.28
LSM5-209ENST00000468872 KBTBD2Q8IY47 623 aa7.04□□□□□ -1.28
LSM5-209ENST00000468872 KLHL36Q8N4N3 616 aa7.04□□□□□ -1.28
LSM5-209ENST00000468872 TTC9BQ8N6N2 239 aa7.04□□□□□ -1.28
LSM5-209ENST00000468872 CHST14Q8NCH0 376 aa7.04□□□□□ -1.28
LSM5-209ENST00000468872 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.04□□□□□ -1.28
LSM5-209ENST00000468872 CATSPERZQ9NTU4 200 aa7.04□□□□□ -1.28
LSM5-209ENST00000468872 NEMP1O14524 444 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms