RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 PCDHA10Q9Y5I2 948 aa11.27□□□□□ -0.61
MSH5-213ENST00000468136 SMCHD1A6NHR9 2005 aa11.26□□□□□ -0.61
MSH5-213ENST00000468136 TESPA1A2RU30 521 aaPredicted RBP11.26□□□□□ -0.61
MSH5-213ENST00000468136 TRIM49BA6NDI0 452 aa11.26□□□□□ -0.61
MSH5-213ENST00000468136 SPATA31C2B4DYI2 1134 aa11.26□□□□□ -0.61
MSH5-213ENST00000468136 H0YCG3 227 aa11.26□□□□□ -0.61
MSH5-213ENST00000468136 SLC16A3O15427 465 aaKnown RBP11.26□□□□□ -0.61
MSH5-213ENST00000468136 CHMP2AO43633 222 aa11.26□□□□□ -0.61
MSH5-213ENST00000468136 MFAP3LO75121 409 aa11.26□□□□□ -0.61
MSH5-213ENST00000468136 PSAPP07602 524 aa11.26□□□□□ -0.61
MSH5-213ENST00000468136 PMS1P54277 932 aaKnown RBP11.26□□□□□ -0.61
MSH5-213ENST00000468136 PSMC6P62333 389 aa11.26□□□□□ -0.61
MSH5-213ENST00000468136 HERVK_113P62684 666 aa11.26□□□□□ -0.61
MSH5-213ENST00000468136 UBXN2AP68543 259 aa11.26□□□□□ -0.61
MSH5-213ENST00000468136 CCNA1P78396 465 aa11.26□□□□□ -0.61
MSH5-213ENST00000468136 TBC1D8BQ0IIM8 1120 aa11.26□□□□□ -0.61
MSH5-213ENST00000468136 PRKG1Q13976 671 aa11.26□□□□□ -0.61
MSH5-213ENST00000468136 CTTNQ14247 550 aaKnown RBP11.26□□□□□ -0.61
MSH5-213ENST00000468136 PLS1Q14651 629 aa11.26□□□□□ -0.61
MSH5-213ENST00000468136 ARID5BQ14865 1188 aa11.26□□□□□ -0.61
MSH5-213ENST00000468136 VWA3BQ502W6 1294 aa11.26□□□□□ -0.61
MSH5-213ENST00000468136 LRRC55Q6ZSA7 311 aa11.26□□□□□ -0.61
MSH5-213ENST00000468136 HS2ST1Q7LGA3 356 aa11.26□□□□□ -0.61
MSH5-213ENST00000468136 FRMD5Q7Z6J6 570 aa11.26□□□□□ -0.61
MSH5-213ENST00000468136 CCAR2Q8N163 923 aaKnown RBP11.26□□□□□ -0.61
MSH5-213ENST00000468136 TC2NQ8N9U0 490 aa11.26□□□□□ -0.61
MSH5-213ENST00000468136 IL31RAQ8NI17 732 aa11.26□□□□□ -0.61
MSH5-213ENST00000468136 SCFD1Q8WVM8 642 aa11.26□□□□□ -0.61
MSH5-213ENST00000468136 OPTNQ96CV9 577 aa11.26□□□□□ -0.61
MSH5-213ENST00000468136 HVCN1Q96D96 273 aa11.26□□□□□ -0.61
MSH5-213ENST00000468136 SLC10A4Q96EP9 437 aa11.26□□□□□ -0.61
MSH5-213ENST00000468136 OTUD5Q96G74 571 aa11.26□□□□□ -0.61
MSH5-213ENST00000468136 MKNK1Q9BUB5 465 aa11.26□□□□□ -0.61
MSH5-213ENST00000468136 VPS16Q9H269 839 aa11.26□□□□□ -0.61
MSH5-213ENST00000468136 RNF39Q9H2S5 420 aa11.26□□□□□ -0.61
MSH5-213ENST00000468136 KCTD10Q9H3F6 313 aa11.26□□□□□ -0.61
MSH5-213ENST00000468136 ST6GALNAC4Q9H4F1 302 aa11.26□□□□□ -0.61
MSH5-213ENST00000468136 TMEM206Q9H813 350 aa11.26□□□□□ -0.61
MSH5-213ENST00000468136 MRPL44Q9H9J2 332 aaKnown RBP11.26□□□□□ -0.61
MSH5-213ENST00000468136 TAB2Q9NYJ8 693 aa11.26□□□□□ -0.61
MSH5-213ENST00000468136 SAMM50Q9Y512 469 aa11.26□□□□□ -0.61
MSH5-213ENST00000468136 POTEB2H3BUK9 544 aa11.25□□□□□ -0.61
MSH5-213ENST00000468136 TRAF5O00463 557 aa11.25□□□□□ -0.61
MSH5-213ENST00000468136 TEX33O43247 280 aa11.25□□□□□ -0.61
MSH5-213ENST00000468136 CETPP11597 493 aa11.25□□□□□ -0.61
MSH5-213ENST00000468136 EDNRBP24530 442 aa11.25□□□□□ -0.61
MSH5-213ENST00000468136 GTF2A2P52657 109 aa11.25□□□□□ -0.61
MSH5-213ENST00000468136 ITGB3BPQ13352 177 aaPredicted RBP11.25□□□□□ -0.61
MSH5-213ENST00000468136 DGKZQ13574 1117 aa11.25□□□□□ -0.61
MSH5-213ENST00000468136 NEDD9Q14511 834 aa11.25□□□□□ -0.61
MSH5-213ENST00000468136 EAPPQ56P03 285 aaPredicted RBP11.25□□□□□ -0.61
MSH5-213ENST00000468136 MIS18BP1Q6P0N0 1132 aa11.25□□□□□ -0.61
MSH5-213ENST00000468136 CYP26C1Q6V0L0 522 aa11.25□□□□□ -0.61
MSH5-213ENST00000468136 FMNL3Q8IVF7 1028 aa11.25□□□□□ -0.61
MSH5-213ENST00000468136 OR8K1Q8NGG5 319 aa11.25□□□□□ -0.61
MSH5-213ENST00000468136 KCNN1Q92952 543 aa11.25□□□□□ -0.61
MSH5-213ENST00000468136 ASCC2Q9H1I8 757 aaPredicted RBP11.25□□□□□ -0.61
MSH5-213ENST00000468136 JPH1Q9HDC5 661 aaPredicted RBP11.25□□□□□ -0.61
MSH5-213ENST00000468136 ZNHIT6Q9NWK9 470 aaKnown RBP11.25□□□□□ -0.61
MSH5-213ENST00000468136 CAPN11Q9UMQ6 739 aa11.25□□□□□ -0.61
MSH5-213ENST00000468136 LUC7L2Q9Y383 392 aaKnown RBP11.25□□□□□ -0.61
MSH5-213ENST00000468136 A0A0G2JMZ2 1700 aa11.25□□□□□ -0.61
MSH5-213ENST00000468136 KCNA2P16389 499 aa11.24□□□□□ -0.61
MSH5-213ENST00000468136 YWHABP31946 246 aaKnown RBP11.24□□□□□ -0.61
MSH5-213ENST00000468136 GCLCP48506 637 aaPredicted RBP11.24□□□□□ -0.61
MSH5-213ENST00000468136 RARRES1P49788 294 aa11.24□□□□□ -0.61
MSH5-213ENST00000468136 ALDH5A1P51649 535 aaPredicted RBP11.24□□□□□ -0.61
MSH5-213ENST00000468136 RTP1P59025 263 aa11.24□□□□□ -0.61
MSH5-213ENST00000468136 ZBED6P86452 979 aa11.24□□□□□ -0.61
MSH5-213ENST00000468136 CDK17Q00537 523 aa11.24□□□□□ -0.61
MSH5-213ENST00000468136 RBL2Q08999 1139 aa11.24□□□□□ -0.61
MSH5-213ENST00000468136 ADAM9Q13443 819 aa11.24□□□□□ -0.61
MSH5-213ENST00000468136 PTPN14Q15678 1187 aa11.24□□□□□ -0.61
MSH5-213ENST00000468136 CCDC40Q4G0X9 1142 aa11.24□□□□□ -0.61
MSH5-213ENST00000468136 HSP90AA4PQ58FG1 418 aa11.24□□□□□ -0.61
MSH5-213ENST00000468136 TREML2Q5T2D2 321 aa11.24□□□□□ -0.61
MSH5-213ENST00000468136 PADI6Q6TGC4 694 aa11.24□□□□□ -0.61
MSH5-213ENST00000468136 SFR1Q86XK3 245 aa11.24□□□□□ -0.61
MSH5-213ENST00000468136 SLC9A9Q8IVB4 645 aa11.24□□□□□ -0.61
MSH5-213ENST00000468136 FAM178BQ8IXR5 827 aa11.24□□□□□ -0.61
MSH5-213ENST00000468136 EXOC8Q8IYI6 725 aa11.24□□□□□ -0.61
MSH5-213ENST00000468136 TXLNBQ8N3L3 684 aa11.24□□□□□ -0.61
MSH5-213ENST00000468136 MYCT1Q8N699 235 aa11.24□□□□□ -0.61
MSH5-213ENST00000468136 MCPH1Q8NEM0 835 aa11.24□□□□□ -0.61
MSH5-213ENST00000468136 KIFAP3Q92845 792 aa11.24□□□□□ -0.61
MSH5-213ENST00000468136 WNK4Q96J92 1243 aa11.24□□□□□ -0.61
MSH5-213ENST00000468136 RUSC1Q9BVN2 902 aa11.24□□□□□ -0.61
MSH5-213ENST00000468136 NDST4Q9H3R1 872 aa11.24□□□□□ -0.61
MSH5-213ENST00000468136 ZHX3Q9H4I2 956 aa11.24□□□□□ -0.61
MSH5-213ENST00000468136 SLC9A2Q9UBY0 812 aa11.24□□□□□ -0.61
MSH5-213ENST00000468136 PTPRFP10586 1907 aa11.24□□□□□ -0.61
MSH5-213ENST00000468136 PES1O00541 588 aaKnown RBP11.23□□□□□ -0.61
MSH5-213ENST00000468136 GCNT3O95395 438 aa11.23□□□□□ -0.61
MSH5-213ENST00000468136 GYPCP04921 128 aa11.23□□□□□ -0.61
MSH5-213ENST00000468136 ZBTB48P10074 688 aaPredicted RBP11.23□□□□□ -0.61
MSH5-213ENST00000468136 EPB41P11171 864 aaKnown RBP11.23□□□□□ -0.61
MSH5-213ENST00000468136 TRIM21P19474 475 aaKnown RBP11.23□□□□□ -0.61
MSH5-213ENST00000468136 SMTNP53814 917 aa11.23□□□□□ -0.61
MSH5-213ENST00000468136 CACNB1Q02641 598 aaPredicted RBP11.23□□□□□ -0.61
MSH5-213ENST00000468136 ENPEPQ07075 957 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms