RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 ZNF862O60290 1169 aa17.02■□□□□ 0.32
SNIP1-202ENST00000468040 CMA1P23946 247 aa17.02■□□□□ 0.32
SNIP1-202ENST00000468040 MNX1P50219 401 aaPredicted RBP17.02■□□□□ 0.32
SNIP1-202ENST00000468040 KIAA0753Q2KHM9 967 aa17.02■□□□□ 0.32
SNIP1-202ENST00000468040 XKR3Q5GH77 459 aa17.02■□□□□ 0.32
SNIP1-202ENST00000468040 HYIQ5T013 277 aa17.02■□□□□ 0.32
SNIP1-202ENST00000468040 POTEBQ6S5H4 581 aa17.02■□□□□ 0.32
SNIP1-202ENST00000468040 BBXQ8WY36 941 aaPredicted RBP17.02■□□□□ 0.32
SNIP1-202ENST00000468040 VTI1AQ96AJ9 217 aa17.02■□□□□ 0.32
SNIP1-202ENST00000468040 EPSTI1Q96J88 318 aa17.02■□□□□ 0.32
SNIP1-202ENST00000468040 SEZ6LQ9BYH1 1024 aa17.02■□□□□ 0.32
SNIP1-202ENST00000468040 NRBP2Q9NSY0 501 aa17.02■□□□□ 0.32
SNIP1-202ENST00000468040 TRPC6Q9Y210 931 aa17.02■□□□□ 0.32
SNIP1-202ENST00000468040 MYH9P35579 1960 aaKnown RBP17.02■□□□□ 0.31
SNIP1-202ENST00000468040 GOLGA6L22H0YM25 854 aa17.01■□□□□ 0.31
SNIP1-202ENST00000468040 HBP1O60381 514 aa17.01■□□□□ 0.31
SNIP1-202ENST00000468040 XRCC6P12956 609 aaKnown RBP eCLIP17.01■□□□□ 0.31
SNIP1-202ENST00000468040 ATP4AP20648 1035 aa17.01■□□□□ 0.31
SNIP1-202ENST00000468040 YWHABP31946 246 aaKnown RBP17.01■□□□□ 0.31
SNIP1-202ENST00000468040 PLCB4Q15147 1175 aa17.01■□□□□ 0.31
SNIP1-202ENST00000468040 ZRSR1Q15695 479 aaKnown RBP17.01■□□□□ 0.31
SNIP1-202ENST00000468040 RESP18Q5W5W9 173 aa17.01■□□□□ 0.31
SNIP1-202ENST00000468040 NFRKBQ6P4R8 1299 aa17.01■□□□□ 0.31
SNIP1-202ENST00000468040 POTEGQ6S5H5 508 aa17.01■□□□□ 0.31
SNIP1-202ENST00000468040 USP49Q70CQ1 688 aa17.01■□□□□ 0.31
SNIP1-202ENST00000468040 OTUD6AQ7L8S5 288 aa17.01■□□□□ 0.31
SNIP1-202ENST00000468040 NACC1Q96RE7 527 aa17.01■□□□□ 0.31
SNIP1-202ENST00000468040 PYM1Q9BRP8 204 aaKnown RBP17.01■□□□□ 0.31
SNIP1-202ENST00000468040 RNPEPQ9H4A4 650 aa17.01■□□□□ 0.31
SNIP1-202ENST00000468040 WRAP73Q9P2S5 460 aaPredicted RBP17.01■□□□□ 0.31
SNIP1-202ENST00000468040 KIAA1024Q9UPX6 916 aa17.01■□□□□ 0.31
SNIP1-202ENST00000468040 WDR81Q562E7 1941 aa17.01■□□□□ 0.31
SNIP1-202ENST00000468040 SCN10AQ9Y5Y9 1956 aa17■□□□□ 0.31
SNIP1-202ENST00000468040 A0A0U1RQG5 324 aaPredicted RBP17■□□□□ 0.31
SNIP1-202ENST00000468040 COL6A1P12109 1028 aa17■□□□□ 0.31
SNIP1-202ENST00000468040 EN2P19622 333 aaPredicted RBP17■□□□□ 0.31
SNIP1-202ENST00000468040 CHMP4BP1P59074 171 aa17■□□□□ 0.31
SNIP1-202ENST00000468040 PSMC6P62333 389 aa17■□□□□ 0.31
SNIP1-202ENST00000468040 ITGA7Q13683 1181 aa17■□□□□ 0.31
SNIP1-202ENST00000468040 KARSQ15046 597 aaKnown RBP17■□□□□ 0.31
SNIP1-202ENST00000468040 TMEM119Q4V9L6 283 aa17■□□□□ 0.31
SNIP1-202ENST00000468040 CCDC73Q6ZRK6 1079 aa17■□□□□ 0.31
SNIP1-202ENST00000468040 NECAB2Q7Z6G3 386 aa17■□□□□ 0.31
SNIP1-202ENST00000468040 SESTD1Q86VW0 696 aa17■□□□□ 0.31
SNIP1-202ENST00000468040 C7orf31Q8N865 590 aa17■□□□□ 0.31
SNIP1-202ENST00000468040 MRPS27Q92552 414 aaKnown RBP17■□□□□ 0.31
SNIP1-202ENST00000468040 NIFKQ9BYG3 293 aaKnown RBP17■□□□□ 0.31
SNIP1-202ENST00000468040 C11orf49Q9H6J7 331 aa17■□□□□ 0.31
SNIP1-202ENST00000468040 ANKEF1Q9NU02 776 aa17■□□□□ 0.31
SNIP1-202ENST00000468040 DDX19AQ9NUU7 478 aaKnown RBP17■□□□□ 0.31
SNIP1-202ENST00000468040 SEPT9Q9UHD8 586 aaPredicted RBP17■□□□□ 0.31
SNIP1-202ENST00000468040 COL1A2P08123 1366 aa17■□□□□ 0.31
SNIP1-202ENST00000468040 CCDC85CA6NKD9 419 aa16.99■□□□□ 0.31
SNIP1-202ENST00000468040 DDX11L8A8MPP1 907 aa16.99■□□□□ 0.31
SNIP1-202ENST00000468040 STBD1O95210 358 aa16.99■□□□□ 0.31
SNIP1-202ENST00000468040 PTPN11Q06124 597 aaPredicted RBP16.99■□□□□ 0.31
SNIP1-202ENST00000468040 GRB10Q13322 594 aa16.99■□□□□ 0.31
SNIP1-202ENST00000468040 NBPF20Q3BBV1 942 aa16.99■□□□□ 0.31
SNIP1-202ENST00000468040 DIS3LQ8TF46 1054 aaKnown RBP16.99■□□□□ 0.31
SNIP1-202ENST00000468040 CCDC43Q96MW1 224 aaKnown RBP16.99■□□□□ 0.31
SNIP1-202ENST00000468040 PNMA5Q96PV4 448 aa16.99■□□□□ 0.31
SNIP1-202ENST00000468040 SENP6Q9GZR1 1112 aaPredicted RBP16.99■□□□□ 0.31
SNIP1-202ENST00000468040 STK17AQ9UEE5 414 aa16.99■□□□□ 0.31
SNIP1-202ENST00000468040 KCNH3Q9ULD8 1083 aa16.99■□□□□ 0.31
SNIP1-202ENST00000468040 DNM3Q9UQ16 869 aa16.99■□□□□ 0.31
SNIP1-202ENST00000468040 PPME1Q9Y570 386 aa16.99■□□□□ 0.31
SNIP1-202ENST00000468040 NRCAMQ92823 1304 aa16.98■□□□□ 0.31
SNIP1-202ENST00000468040 FAM237AA0A1B0GTK4 181 aa16.98■□□□□ 0.31
SNIP1-202ENST00000468040 RRN3P2A6NIE6 340 aa16.98■□□□□ 0.31
SNIP1-202ENST00000468040 SMIM10L2AP0DMW4 78 aa16.98■□□□□ 0.31
SNIP1-202ENST00000468040 SMIM10L2BP0DMW5 78 aa16.98■□□□□ 0.31
SNIP1-202ENST00000468040 GNAT1P11488 350 aa16.98■□□□□ 0.31
SNIP1-202ENST00000468040 PLCG1P19174 1290 aa16.98■□□□□ 0.31
SNIP1-202ENST00000468040 STAT6P42226 847 aa16.98■□□□□ 0.31
SNIP1-202ENST00000468040 UBE2HP62256 183 aa16.98■□□□□ 0.31
SNIP1-202ENST00000468040 PPFIA1Q13136 1202 aa16.98■□□□□ 0.31
SNIP1-202ENST00000468040 ECM1Q16610 540 aa16.98■□□□□ 0.31
SNIP1-202ENST00000468040 ZNF484Q5JVG2 852 aa16.98■□□□□ 0.31
SNIP1-202ENST00000468040 RRAGBQ5VZM2 374 aa16.98■□□□□ 0.31
SNIP1-202ENST00000468040 ANO5Q75V66 913 aa16.98■□□□□ 0.31
SNIP1-202ENST00000468040 TRMT1LQ7Z2T5 733 aaKnown RBP16.98■□□□□ 0.31
SNIP1-202ENST00000468040 FSIP1Q8NA03 581 aa16.98■□□□□ 0.31
SNIP1-202ENST00000468040 PAWRQ96IZ0 340 aaKnown RBP16.98■□□□□ 0.31
SNIP1-202ENST00000468040 DBR1Q9UK59 544 aaKnown RBP16.98■□□□□ 0.31
SNIP1-202ENST00000468040 KIAA0100Q14667 2235 aaKnown RBP16.98■□□□□ 0.31
SNIP1-202ENST00000468040 GRIN2DO15399 1336 aa16.97■□□□□ 0.31
SNIP1-202ENST00000468040 BRCA2P51587 3418 aa16.97■□□□□ 0.31
SNIP1-202ENST00000468040 ARVCFO00192 962 aa16.97■□□□□ 0.31
SNIP1-202ENST00000468040 PRPF40AO75400 957 aaKnown RBP16.97■□□□□ 0.31
SNIP1-202ENST00000468040 EYA4O95677 639 aa16.97■□□□□ 0.31
SNIP1-202ENST00000468040 INSRRP14616 1297 aa16.97■□□□□ 0.31
SNIP1-202ENST00000468040 PFKFB1P16118 471 aa16.97■□□□□ 0.31
SNIP1-202ENST00000468040 RARRES1P49788 294 aa16.97■□□□□ 0.31
SNIP1-202ENST00000468040 GRIK4Q16099 956 aa16.97■□□□□ 0.31
SNIP1-202ENST00000468040 FAM47CQ5HY64 1035 aa16.97■□□□□ 0.31
SNIP1-202ENST00000468040 PLA2G4FQ68DD2 849 aa16.97■□□□□ 0.31
SNIP1-202ENST00000468040 EXOC8Q8IYI6 725 aa16.97■□□□□ 0.31
SNIP1-202ENST00000468040 IQUBQ8NA54 791 aa16.97■□□□□ 0.31
SNIP1-202ENST00000468040 SLC43A3Q8NBI5 491 aa16.97■□□□□ 0.31
SNIP1-202ENST00000468040 PIGOQ8TEQ8 1089 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms