RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 GCFC2P16383 781 aaKnown RBP16.18■□□□□ 0.18
PRPF38B-204ENST00000467302 POLR2FP61218 127 aaKnown RBP16.18■□□□□ 0.18
PRPF38B-204ENST00000467302 USP17L24Q0WX57 530 aa16.18■□□□□ 0.18
PRPF38B-204ENST00000467302 SLC18A3Q16572 532 aa16.18■□□□□ 0.18
PRPF38B-204ENST00000467302 USP17L6PQ6QN14 398 aa16.18■□□□□ 0.18
PRPF38B-204ENST00000467302 BTNL9Q6UXG8 535 aa16.18■□□□□ 0.18
PRPF38B-204ENST00000467302 FBXO11Q86XK2 927 aa16.18■□□□□ 0.18
PRPF38B-204ENST00000467302 GJA10Q969M2 543 aa16.18■□□□□ 0.18
PRPF38B-204ENST00000467302 LSM14BQ9BX40 385 aaKnown RBP16.18■□□□□ 0.18
PRPF38B-204ENST00000467302 ZBTB21Q9ULJ3 1066 aa16.18■□□□□ 0.18
PRPF38B-204ENST00000467302 GRIN2DO15399 1336 aa16.18■□□□□ 0.18
PRPF38B-204ENST00000467302 NFKBIEO00221 500 aa16.18■□□□□ 0.18
PRPF38B-204ENST00000467302 PALMO75781 387 aa16.18■□□□□ 0.18
PRPF38B-204ENST00000467302 CLSTN1O94985 981 aa16.18■□□□□ 0.18
PRPF38B-204ENST00000467302 GLI1P08151 1106 aa16.18■□□□□ 0.18
PRPF38B-204ENST00000467302 SNAP25P60880 206 aa16.18■□□□□ 0.18
PRPF38B-204ENST00000467302 TTMPQ5BVD1 217 aa16.18■□□□□ 0.18
PRPF38B-204ENST00000467302 MCTP2Q6DN12 878 aa16.18■□□□□ 0.18
PRPF38B-204ENST00000467302 CAPS2Q9BXY5 557 aa16.18■□□□□ 0.18
PRPF38B-204ENST00000467302 NT5C3AQ9H0P0 336 aa16.18■□□□□ 0.18
PRPF38B-204ENST00000467302 KCTD10Q9H3F6 313 aa16.18■□□□□ 0.18
PRPF38B-204ENST00000467302 MYOZ2Q9NPC6 264 aa16.18■□□□□ 0.18
PRPF38B-204ENST00000467302 AIPL1Q9NZN9 384 aa16.18■□□□□ 0.18
PRPF38B-204ENST00000467302 LTBP3Q9NS15 1303 aa16.17■□□□□ 0.18
PRPF38B-204ENST00000467302 GRID2IPA4D2P6 1211 aa16.17■□□□□ 0.18
PRPF38B-204ENST00000467302 MARCH6O60337 910 aa16.17■□□□□ 0.18
PRPF38B-204ENST00000467302 RPS12P25398 132 aaKnown RBP16.17■□□□□ 0.18
PRPF38B-204ENST00000467302 KLRC1P26715 233 aa16.17■□□□□ 0.18
PRPF38B-204ENST00000467302 MEI1Q5TIA1 1274 aa16.17■□□□□ 0.18
PRPF38B-204ENST00000467302 IFT20Q8IY31 132 aa16.17■□□□□ 0.18
PRPF38B-204ENST00000467302 ARL8AQ96BM9 186 aa16.17■□□□□ 0.18
PRPF38B-204ENST00000467302 TMEM39BQ9GZU3 492 aa16.17■□□□□ 0.18
PRPF38B-204ENST00000467302 GOPCQ9HD26 462 aa16.17■□□□□ 0.18
PRPF38B-204ENST00000467302 LUC7LQ9NQ29 371 aaKnown RBP16.17■□□□□ 0.18
PRPF38B-204ENST00000467302 PCDHA12Q9UN75 941 aa16.17■□□□□ 0.18
PRPF38B-204ENST00000467302 TMX2Q9Y320 296 aa16.17■□□□□ 0.18
PRPF38B-204ENST00000467302 CD2APQ9Y5K6 639 aa16.17■□□□□ 0.18
PRPF38B-204ENST00000467302 KDM3AQ9Y4C1 1321 aa16.16■□□□□ 0.18
PRPF38B-204ENST00000467302 WNT10BO00744 389 aa16.16■□□□□ 0.18
PRPF38B-204ENST00000467302 EIF3HO15372 352 aaKnown RBP eCLIP16.16■□□□□ 0.18
PRPF38B-204ENST00000467302 HSF2BPO75031 334 aa16.16■□□□□ 0.18
PRPF38B-204ENST00000467302 USP11P51784 963 aa16.16■□□□□ 0.18
PRPF38B-204ENST00000467302 NAP1L1P55209 391 aaKnown RBP16.16■□□□□ 0.18
PRPF38B-204ENST00000467302 SKOR1P84550 965 aa16.16■□□□□ 0.18
PRPF38B-204ENST00000467302 APBA1Q02410 837 aa16.16■□□□□ 0.18
PRPF38B-204ENST00000467302 AP3B2Q13367 1082 aa16.16■□□□□ 0.18
PRPF38B-204ENST00000467302 IQCKQ8N0W5 287 aa16.16■□□□□ 0.18
PRPF38B-204ENST00000467302 SPICE1Q8N0Z3 855 aa16.16■□□□□ 0.18
PRPF38B-204ENST00000467302 SCFD1Q8WVM8 642 aa16.16■□□□□ 0.18
PRPF38B-204ENST00000467302 TBC1D5Q92609 795 aa16.16■□□□□ 0.18
PRPF38B-204ENST00000467302 INPP4AQ96PE3 977 aaPredicted RBP16.16■□□□□ 0.18
PRPF38B-204ENST00000467302 ANO3Q9BYT9 981 aa16.16■□□□□ 0.18
PRPF38B-204ENST00000467302 GANQ9H2C0 597 aa16.16■□□□□ 0.18
PRPF38B-204ENST00000467302 BMP2KQ9NSY1 1161 aaPredicted RBP16.16■□□□□ 0.18
PRPF38B-204ENST00000467302 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.16■□□□□ 0.18
PRPF38B-204ENST00000467302 A0A087X0T9 212 aa16.16■□□□□ 0.18
PRPF38B-204ENST00000467302 FRMD3A2A2Y4 597 aa16.16■□□□□ 0.18
PRPF38B-204ENST00000467302 MEIS2O14770 477 aa16.16■□□□□ 0.18
PRPF38B-204ENST00000467302 FAM228BP0C875 321 aa16.16■□□□□ 0.18
PRPF38B-204ENST00000467302 ECE1P42892 770 aa16.16■□□□□ 0.18
PRPF38B-204ENST00000467302 CARSP49589 748 aaKnown RBP16.16■□□□□ 0.18
PRPF38B-204ENST00000467302 ZNF280AP59817 542 aaPredicted RBP16.16■□□□□ 0.18
PRPF38B-204ENST00000467302 CCDC65Q8IXS2 484 aa16.16■□□□□ 0.18
PRPF38B-204ENST00000467302 ACER1Q8TDN7 264 aa16.16■□□□□ 0.18
PRPF38B-204ENST00000467302 ZIM3Q96PE6 472 aa16.16■□□□□ 0.18
PRPF38B-204ENST00000467302 TBC1D7Q9P0N9 293 aa16.16■□□□□ 0.18
PRPF38B-204ENST00000467302 ANKRD65E5RJM6 399 aa16.15■□□□□ 0.18
PRPF38B-204ENST00000467302 E9PMD0 336 aa16.15■□□□□ 0.18
PRPF38B-204ENST00000467302 SLC26A4O43511 780 aa16.15■□□□□ 0.18
PRPF38B-204ENST00000467302 FTCDO95954 541 aa16.15■□□□□ 0.18
PRPF38B-204ENST00000467302 PLA2G4BP0C869 781 aa16.15■□□□□ 0.18
PRPF38B-204ENST00000467302 TRAF1Q13077 416 aa16.15■□□□□ 0.18
PRPF38B-204ENST00000467302 USH1GQ495M9 461 aa16.15■□□□□ 0.18
PRPF38B-204ENST00000467302 DPY19L2P1Q6NXN4 242 aa16.15■□□□□ 0.18
PRPF38B-204ENST00000467302 MIGA2Q7L4E1 593 aa16.15■□□□□ 0.18
PRPF38B-204ENST00000467302 NELFCDQ8IXH7 590 aa16.15■□□□□ 0.18
PRPF38B-204ENST00000467302 MREGQ8N565 214 aa16.15■□□□□ 0.18
PRPF38B-204ENST00000467302 PPP1R1BQ9UD71 204 aaPredicted RBP16.15■□□□□ 0.18
PRPF38B-204ENST00000467302 PRR12Q9ULL5 1215 aa16.15■□□□□ 0.18
PRPF38B-204ENST00000467302 KIAA1024Q9UPX6 916 aa16.15■□□□□ 0.18
PRPF38B-204ENST00000467302 ATAD5Q96QE3 1844 aa16.15■□□□□ 0.18
PRPF38B-204ENST00000467302 BTNL10A8MVZ5 291 aa16.14■□□□□ 0.17
PRPF38B-204ENST00000467302 FAM153BP0C7A2 387 aa16.14■□□□□ 0.17
PRPF38B-204ENST00000467302 CYP11B2P19099 503 aa16.14■□□□□ 0.17
PRPF38B-204ENST00000467302 STAT2P52630 851 aa16.14■□□□□ 0.17
PRPF38B-204ENST00000467302 EDRF1Q3B7T1 1238 aa16.14■□□□□ 0.17
PRPF38B-204ENST00000467302 NBPF9Q3BBW0 867 aa16.14■□□□□ 0.17
PRPF38B-204ENST00000467302 FAM153CQ494X1 144 aa16.14■□□□□ 0.17
PRPF38B-204ENST00000467302 TEX2Q8IWB9 1127 aa16.14■□□□□ 0.17
PRPF38B-204ENST00000467302 EFCAB13Q8IY85 973 aa16.14■□□□□ 0.17
PRPF38B-204ENST00000467302 PPM1EQ8WY54 764 aa16.14■□□□□ 0.17
PRPF38B-204ENST00000467302 ADAMTS1Q9UHI8 967 aa16.14■□□□□ 0.17
PRPF38B-204ENST00000467302 PGAP2Q9UHJ9 254 aa16.14■□□□□ 0.17
PRPF38B-204ENST00000467302 FAM153AQ9UHL3 310 aa16.14■□□□□ 0.17
PRPF38B-204ENST00000467302 CYP3A7-CYP3A51PA0A087WV96 503 aa16.14■□□□□ 0.17
PRPF38B-204ENST00000467302 NPHP3-ACAD11A0A0J9YXS1 232 aa16.14■□□□□ 0.17
PRPF38B-204ENST00000467302 ZSCAN5CA6NGD5 496 aaPredicted RBP16.14■□□□□ 0.17
PRPF38B-204ENST00000467302 HEXIM1O94992 359 aaKnown RBP16.14■□□□□ 0.17
PRPF38B-204ENST00000467302 SSBP05455 408 aaKnown RBP eCLIP16.14■□□□□ 0.17
PRPF38B-204ENST00000467302 CYP3A7P24462 503 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms