RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 AJUBAQ96IF1 538 aa6.26□□□□□ -1.41
SMC4-207ENST00000467263 RNPC3Q96LT9 517 aaKnown RBP6.26□□□□□ -1.41
SMC4-207ENST00000467263 TESMINQ9Y4I5 508 aa6.26□□□□□ -1.41
SMC4-207ENST00000467263 SLC4A7Q9Y6M7 1214 aa6.26□□□□□ -1.41
SMC4-207ENST00000467263 NPIPB8E9PQR5 432 aa6.25□□□□□ -1.41
SMC4-207ENST00000467263 ARVCFO00192 962 aa6.25□□□□□ -1.41
SMC4-207ENST00000467263 PPP1R12AO14974 1030 aaPredicted RBP6.25□□□□□ -1.41
SMC4-207ENST00000467263 PLSCR1O15162 318 aa6.25□□□□□ -1.41
SMC4-207ENST00000467263 EFCAB14O75071 495 aa6.25□□□□□ -1.41
SMC4-207ENST00000467263 PYGMP11217 842 aa6.25□□□□□ -1.41
SMC4-207ENST00000467263 TRIM61Q5EBN2 209 aa6.25□□□□□ -1.41
SMC4-207ENST00000467263 FGD2Q7Z6J4 655 aa6.25□□□□□ -1.41
SMC4-207ENST00000467263 ZC3H7AQ8IWR0 971 aaKnown RBP6.25□□□□□ -1.41
SMC4-207ENST00000467263 TRIM48Q8IWZ4 208 aa6.25□□□□□ -1.41
SMC4-207ENST00000467263 UHMK1Q8TAS1 419 aaKnown RBP6.25□□□□□ -1.41
SMC4-207ENST00000467263 MAGEB10Q96LZ2 347 aaPredicted RBP6.25□□□□□ -1.41
SMC4-207ENST00000467263 CLUHP3Q96NS8 147 aa6.25□□□□□ -1.41
SMC4-207ENST00000467263 LMF1Q96S06 567 aa6.25□□□□□ -1.41
SMC4-207ENST00000467263 TACO1Q9BSH4 297 aaKnown RBP6.25□□□□□ -1.41
SMC4-207ENST00000467263 MRPL4Q9BYD3 311 aaKnown RBP6.25□□□□□ -1.41
SMC4-207ENST00000467263 CATSPERZQ9NTU4 200 aa6.25□□□□□ -1.41
SMC4-207ENST00000467263 ARHGAP20Q9P2F6 1191 aa6.25□□□□□ -1.41
SMC4-207ENST00000467263 DSEQ9UL01 958 aa6.25□□□□□ -1.41
SMC4-207ENST00000467263 MRPL42Q9Y6G3 142 aaKnown RBP6.25□□□□□ -1.41
SMC4-207ENST00000467263 TCRBV5S4A2TA0A5A2 114 aa6.24□□□□□ -1.41
SMC4-207ENST00000467263 ASMTLO95671 621 aa6.24□□□□□ -1.41
SMC4-207ENST00000467263 NAT1P18440 290 aa6.24□□□□□ -1.41
SMC4-207ENST00000467263 DNM2P50570 870 aa6.24□□□□□ -1.41
SMC4-207ENST00000467263 ST5P78524 1137 aa6.24□□□□□ -1.41
SMC4-207ENST00000467263 NOLC1Q14978 699 aaKnown RBP eCLIP6.24□□□□□ -1.41
SMC4-207ENST00000467263 HABP4Q5JVS0 413 aaKnown RBP6.24□□□□□ -1.41
SMC4-207ENST00000467263 FBXW5Q969U6 566 aa6.24□□□□□ -1.41
SMC4-207ENST00000467263 CD244Q9BZW8 370 aa6.24□□□□□ -1.41
SMC4-207ENST00000467263 KATNBL1Q9H079 304 aa6.24□□□□□ -1.41
SMC4-207ENST00000467263 SLITRK6Q9H5Y7 841 aa6.24□□□□□ -1.41
SMC4-207ENST00000467263 SEC61A2Q9H9S3 476 aa6.24□□□□□ -1.41
SMC4-207ENST00000467263 TMEM260Q9NX78 707 aa6.24□□□□□ -1.41
SMC4-207ENST00000467263 CBLCQ9ULV8 474 aa6.24□□□□□ -1.41
SMC4-207ENST00000467263 CCDC66A2RUB6 948 aa6.23□□□□□ -1.41
SMC4-207ENST00000467263 ZNF839A8K0R7 811 aa6.23□□□□□ -1.41
SMC4-207ENST00000467263 WNT9AO14904 365 aa6.23□□□□□ -1.41
SMC4-207ENST00000467263 PLD2O14939 933 aa6.23□□□□□ -1.41
SMC4-207ENST00000467263 FBXO21O94952 628 aa6.23□□□□□ -1.41
SMC4-207ENST00000467263 PDE6AP16499 860 aa6.23□□□□□ -1.41
SMC4-207ENST00000467263 KRT15P19012 456 aa6.23□□□□□ -1.41
SMC4-207ENST00000467263 ARHGAP36Q6ZRI8 547 aa6.23□□□□□ -1.41
SMC4-207ENST00000467263 TAX1BP1Q86VP1 789 aa6.23□□□□□ -1.41
SMC4-207ENST00000467263 JAZF1Q86VZ6 243 aa6.23□□□□□ -1.41
SMC4-207ENST00000467263 OSTM1Q86WC4 334 aa6.23□□□□□ -1.41
SMC4-207ENST00000467263 SH3RF2Q8TEC5 729 aa6.23□□□□□ -1.41
SMC4-207ENST00000467263 ADOQ96SZ5 270 aa6.23□□□□□ -1.41
SMC4-207ENST00000467263 ZNF341Q9BYN7 854 aa6.23□□□□□ -1.41
SMC4-207ENST00000467263 TRIM39Q9HCM9 518 aa6.23□□□□□ -1.41
SMC4-207ENST00000467263 SLC39A2Q9NP94 309 aa6.23□□□□□ -1.41
SMC4-207ENST00000467263 ZFR2Q9UPR6 939 aaKnown RBP6.23□□□□□ -1.41
SMC4-207ENST00000467263 COQ6Q9Y2Z9 468 aa6.23□□□□□ -1.41
SMC4-207ENST00000467263 KCNK3O14649 394 aa6.22□□□□□ -1.41
SMC4-207ENST00000467263 APPP05067 770 aa6.22□□□□□ -1.41
SMC4-207ENST00000467263 DGCR2P98153 550 aa6.22□□□□□ -1.41
SMC4-207ENST00000467263 C21orf62-AS1Q17RA5 79 aa6.22□□□□□ -1.41
SMC4-207ENST00000467263 KCTD1Q719H9 257 aa6.22□□□□□ -1.41
SMC4-207ENST00000467263 C16orf59Q7L2K0 433 aa6.22□□□□□ -1.41
SMC4-207ENST00000467263 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.22□□□□□ -1.41
SMC4-207ENST00000467263 FUKQ8N0W3 1084 aa6.22□□□□□ -1.41
SMC4-207ENST00000467263 CISD2Q8N5K1 135 aaKnown RBP6.22□□□□□ -1.41
SMC4-207ENST00000467263 GIMAP8Q8ND71 665 aaPredicted RBP6.22□□□□□ -1.41
SMC4-207ENST00000467263 NEIL1Q96FI4 390 aaPredicted RBP6.22□□□□□ -1.41
SMC4-207ENST00000467263 FANCLQ9NW38 375 aa6.22□□□□□ -1.41
SMC4-207ENST00000467263 TCRBV16S1A1N1A0A5B0 115 aa6.21□□□□□ -1.42
SMC4-207ENST00000467263 KCNQ2O43526 872 aa6.21□□□□□ -1.42
SMC4-207ENST00000467263 AMY2AP04746 511 aa6.21□□□□□ -1.42
SMC4-207ENST00000467263 CHGBP05060 677 aa6.21□□□□□ -1.42
SMC4-207ENST00000467263 AMY2BP19961 511 aa6.21□□□□□ -1.42
SMC4-207ENST00000467263 JAM2P57087 298 aa6.21□□□□□ -1.42
SMC4-207ENST00000467263 FOXE3Q13461 319 aa6.21□□□□□ -1.42
SMC4-207ENST00000467263 CRY1Q16526 586 aa6.21□□□□□ -1.42
SMC4-207ENST00000467263 RNF151Q2KHN1 245 aa6.21□□□□□ -1.42
SMC4-207ENST00000467263 FAM47CQ5HY64 1035 aa6.21□□□□□ -1.42
SMC4-207ENST00000467263 AGBL4Q5VU57 503 aa6.21□□□□□ -1.42
SMC4-207ENST00000467263 ABHD17CQ6PCB6 329 aa6.21□□□□□ -1.42
SMC4-207ENST00000467263 RNF207Q6ZRF8 634 aa6.21□□□□□ -1.42
SMC4-207ENST00000467263 Q6ZSN1 163 aa6.21□□□□□ -1.42
SMC4-207ENST00000467263 USP51Q70EK9 711 aa6.21□□□□□ -1.42
SMC4-207ENST00000467263 PTRH1Q86Y79 214 aaKnown RBP6.21□□□□□ -1.42
SMC4-207ENST00000467263 HOMER1Q86YM7 354 aa6.21□□□□□ -1.42
SMC4-207ENST00000467263 EXTL1Q92935 676 aa6.21□□□□□ -1.42
SMC4-207ENST00000467263 ZNF503Q96F45 646 aa6.21□□□□□ -1.42
SMC4-207ENST00000467263 PDGFDQ9GZP0 370 aaPredicted RBP6.21□□□□□ -1.42
SMC4-207ENST00000467263 SEMA4AQ9H3S1 761 aa6.21□□□□□ -1.42
SMC4-207ENST00000467263 NUB1Q9Y5A7 615 aa6.21□□□□□ -1.42
SMC4-207ENST00000467263 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.2□□□□□ -1.42
SMC4-207ENST00000467263 GSTA4O15217 222 aa6.2□□□□□ -1.42
SMC4-207ENST00000467263 ENO2P09104 434 aaPredicted RBP6.2□□□□□ -1.42
SMC4-207ENST00000467263 EPHA5P54756 1037 aa6.2□□□□□ -1.42
SMC4-207ENST00000467263 PRKD1Q15139 912 aaPredicted RBP6.2□□□□□ -1.42
SMC4-207ENST00000467263 GPR19Q15760 415 aa6.2□□□□□ -1.42
SMC4-207ENST00000467263 FNDC3BQ53EP0 1204 aaKnown RBP6.2□□□□□ -1.42
SMC4-207ENST00000467263 APPBP2Q92624 585 aa6.2□□□□□ -1.42
SMC4-207ENST00000467263 CD2APQ9Y5K6 639 aa6.2□□□□□ -1.42
SMC4-207ENST00000467263 H0Y858 1186 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms