RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 CALML3P27482 149 aa16.99■□□□□ 0.31
SNED1-208ENST00000466618 GNA11P29992 359 aa16.99■□□□□ 0.31
SNED1-208ENST00000466618 COPB2P35606 906 aa16.99■□□□□ 0.31
SNED1-208ENST00000466618 CLK2P49760 499 aaKnown RBP16.99■□□□□ 0.31
SNED1-208ENST00000466618 CDKAL1Q5VV42 579 aa16.99■□□□□ 0.31
SNED1-208ENST00000466618 SPATA20Q8TB22 786 aa16.99■□□□□ 0.31
SNED1-208ENST00000466618 TBC1D5Q92609 795 aa16.99■□□□□ 0.31
SNED1-208ENST00000466618 PORCNQ9H237 461 aa16.99■□□□□ 0.31
SNED1-208ENST00000466618 C6orf50Q9HD87 102 aa16.99■□□□□ 0.31
SNED1-208ENST00000466618 HOMER2Q9NSB8 354 aa16.99■□□□□ 0.31
SNED1-208ENST00000466618 ABHD10Q9NUJ1 306 aa16.99■□□□□ 0.31
SNED1-208ENST00000466618 COL11A1P12107 1806 aaPredicted RBP16.98■□□□□ 0.31
SNED1-208ENST00000466618 GOLGA6BA6NDN3 693 aa16.98■□□□□ 0.31
SNED1-208ENST00000466618 RNF225M0QZC1 329 aaPredicted RBP16.98■□□□□ 0.31
SNED1-208ENST00000466618 PIK3CDO00329 1044 aa16.98■□□□□ 0.31
SNED1-208ENST00000466618 ENC1O14682 589 aa16.98■□□□□ 0.31
SNED1-208ENST00000466618 POLR2DO15514 142 aaKnown RBP16.98■□□□□ 0.31
SNED1-208ENST00000466618 SPATA1Q5VX52 437 aa16.98■□□□□ 0.31
SNED1-208ENST00000466618 CCNI2Q6ZMN8 369 aaPredicted RBP16.98■□□□□ 0.31
SNED1-208ENST00000466618 GBP6Q6ZN66 633 aa16.98■□□□□ 0.31
SNED1-208ENST00000466618 FAM212AQ96EL1 285 aa16.98■□□□□ 0.31
SNED1-208ENST00000466618 MROH8Q9H579 483 aa16.98■□□□□ 0.31
SNED1-208ENST00000466618 ACAD9Q9H845 621 aa16.98■□□□□ 0.31
SNED1-208ENST00000466618 REXO2Q9Y3B8 237 aaKnown RBP16.98■□□□□ 0.31
SNED1-208ENST00000466618 ATP1A1P05023 1023 aaKnown RBP16.98■□□□□ 0.31
SNED1-208ENST00000466618 HSD17B4P51659 736 aa16.98■□□□□ 0.31
SNED1-208ENST00000466618 ADCY7P51828 1080 aa16.98■□□□□ 0.31
SNED1-208ENST00000466618 MRPL12P52815 198 aaKnown RBP16.98■□□□□ 0.31
SNED1-208ENST00000466618 CCNA1P78396 465 aa16.98■□□□□ 0.31
SNED1-208ENST00000466618 BLIDQ8IZY5 108 aa16.98■□□□□ 0.31
SNED1-208ENST00000466618 SAMD3Q8N6K7 520 aa16.98■□□□□ 0.31
SNED1-208ENST00000466618 OXER1Q8TDS5 423 aa16.98■□□□□ 0.31
SNED1-208ENST00000466618 CUL5Q93034 780 aa16.98■□□□□ 0.31
SNED1-208ENST00000466618 TNFRSF25Q93038 417 aa16.98■□□□□ 0.31
SNED1-208ENST00000466618 TACO1Q9BSH4 297 aaKnown RBP16.98■□□□□ 0.31
SNED1-208ENST00000466618 GLT8D2Q9H1C3 349 aa16.98■□□□□ 0.31
SNED1-208ENST00000466618 FBXO40Q9UH90 709 aa16.98■□□□□ 0.31
SNED1-208ENST00000466618 ACTN4O43707 911 aaKnown RBP16.97■□□□□ 0.31
SNED1-208ENST00000466618 SRGAP2O75044 1071 aa16.97■□□□□ 0.31
SNED1-208ENST00000466618 CD44P16070 742 aaKnown RBP16.97■□□□□ 0.31
SNED1-208ENST00000466618 CUL4BQ13620 913 aa16.97■□□□□ 0.31
SNED1-208ENST00000466618 MCF2L2Q86YR7 1114 aa16.97■□□□□ 0.31
SNED1-208ENST00000466618 DIS3L2Q8IYB7 885 aaKnown RBP16.97■□□□□ 0.31
SNED1-208ENST00000466618 AENQ8WTP8 325 aaKnown RBP16.97■□□□□ 0.31
SNED1-208ENST00000466618 MAP3K20Q9NYL2 800 aaKnown RBP16.97■□□□□ 0.31
SNED1-208ENST00000466618 MCM8Q9UJA3 840 aa16.97■□□□□ 0.31
SNED1-208ENST00000466618 SYNRGQ9UMZ2 1314 aa16.97■□□□□ 0.31
SNED1-208ENST00000466618 BTBD18B2RXH4 712 aa16.96■□□□□ 0.31
SNED1-208ENST00000466618 TRPA1O75762 1119 aa16.96■□□□□ 0.31
SNED1-208ENST00000466618 STX17P56962 302 aa16.96■□□□□ 0.31
SNED1-208ENST00000466618 TTC19Q6DKK2 380 aaPredicted RBP16.96■□□□□ 0.31
SNED1-208ENST00000466618 USP17L6PQ6QN14 398 aa16.96■□□□□ 0.31
SNED1-208ENST00000466618 CYP26C1Q6V0L0 522 aa16.96■□□□□ 0.31
SNED1-208ENST00000466618 NCAPG2Q86XI2 1143 aa16.96■□□□□ 0.31
SNED1-208ENST00000466618 CD248Q9HCU0 757 aa16.96■□□□□ 0.31
SNED1-208ENST00000466618 SAGE1Q9NXZ1 904 aa16.96■□□□□ 0.31
SNED1-208ENST00000466618 FBXO2Q9UK22 296 aaPredicted RBP16.96■□□□□ 0.31
SNED1-208ENST00000466618 SCP2P22307 547 aa16.96■□□□□ 0.31
SNED1-208ENST00000466618 CDC25AP30304 524 aa16.96■□□□□ 0.31
SNED1-208ENST00000466618 KRT2P35908 639 aa16.96■□□□□ 0.31
SNED1-208ENST00000466618 SETQ01105 290 aaPredicted RBP16.96■□□□□ 0.31
SNED1-208ENST00000466618 SATB1Q01826 763 aa16.96■□□□□ 0.31
SNED1-208ENST00000466618 NR5A1Q13285 461 aa16.96■□□□□ 0.31
SNED1-208ENST00000466618 PAPD7Q5XG87 772 aaKnown RBP16.96■□□□□ 0.31
SNED1-208ENST00000466618 FOXP1Q9H334 677 aaPredicted RBP16.96■□□□□ 0.31
SNED1-208ENST00000466618 GUCA1BQ9UMX6 200 aa16.96■□□□□ 0.31
SNED1-208ENST00000466618 PCDHA6Q9UN73 950 aa16.96■□□□□ 0.31
SNED1-208ENST00000466618 PCDHA8Q9Y5H6 950 aa16.96■□□□□ 0.31
SNED1-208ENST00000466618 CFBP00751 764 aa16.95■□□□□ 0.3
SNED1-208ENST00000466618 SKOR1P84550 965 aa16.95■□□□□ 0.3
SNED1-208ENST00000466618 MAP2K1Q02750 393 aaPredicted RBP16.95■□□□□ 0.3
SNED1-208ENST00000466618 UBE2SQ16763 222 aa16.95■□□□□ 0.3
SNED1-208ENST00000466618 CTAGE1Q96RT6 745 aa16.95■□□□□ 0.3
SNED1-208ENST00000466618 CYP39A1Q9NYL5 469 aa16.95■□□□□ 0.3
SNED1-208ENST00000466618 SAR1BQ9Y6B6 198 aa16.95■□□□□ 0.3
SNED1-208ENST00000466618 MYH6P13533 1939 aa16.95■□□□□ 0.3
SNED1-208ENST00000466618 GCOM1H8Y6P7 765 aaPredicted RBP16.95■□□□□ 0.3
SNED1-208ENST00000466618 POLR2MP0CAP2 368 aa16.95■□□□□ 0.3
SNED1-208ENST00000466618 PTPREP23469 700 aa16.95■□□□□ 0.3
SNED1-208ENST00000466618 RPS6P62753 249 aaKnown RBP16.95■□□□□ 0.3
SNED1-208ENST00000466618 SAFBQ15424 915 aaKnown RBP eCLIP16.95■□□□□ 0.3
SNED1-208ENST00000466618 REXO1Q8N1G1 1221 aaKnown RBP16.95■□□□□ 0.3
SNED1-208ENST00000466618 RASGRP4Q8TDF6 673 aa16.95■□□□□ 0.3
SNED1-208ENST00000466618 RPGRIP1Q96KN7 1286 aa16.95■□□□□ 0.3
SNED1-208ENST00000466618 CAPZA3Q96KX2 299 aa16.95■□□□□ 0.3
SNED1-208ENST00000466618 SMCHD1A6NHR9 2005 aa16.94■□□□□ 0.3
SNED1-208ENST00000466618 GOLGA8KD6RF30 607 aa16.94■□□□□ 0.3
SNED1-208ENST00000466618 MAPK4P31152 587 aa16.94■□□□□ 0.3
SNED1-208ENST00000466618 HOXA13P31271 388 aaPredicted RBP16.94■□□□□ 0.3
SNED1-208ENST00000466618 TOB1P50616 345 aaPredicted RBP16.94■□□□□ 0.3
SNED1-208ENST00000466618 EARS2Q5JPH6 523 aaKnown RBP16.94■□□□□ 0.3
SNED1-208ENST00000466618 KLHL10Q6JEL2 608 aa16.94■□□□□ 0.3
SNED1-208ENST00000466618 SLC30A10Q6XR72 485 aa16.94■□□□□ 0.3
SNED1-208ENST00000466618 RNF207Q6ZRF8 634 aa16.94■□□□□ 0.3
SNED1-208ENST00000466618 SYTL5Q8TDW5 730 aaPredicted RBP16.94■□□□□ 0.3
SNED1-208ENST00000466618 TMEM260Q9NX78 707 aa16.94■□□□□ 0.3
SNED1-208ENST00000466618 COL20A1Q9P218 1284 aa16.94■□□□□ 0.3
SNED1-208ENST00000466618 BIN2Q9UBW5 565 aaPredicted RBP16.94■□□□□ 0.3
SNED1-208ENST00000466618 FAM184BQ9ULE4 1060 aa16.94■□□□□ 0.3
SNED1-208ENST00000466618 MEFVO15553 781 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms