RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 ESPNLQ6ZVH7 1005 aa5.83□□□□□ -1.48
CDC42BPA-211ENST00000466538 NOL8Q76FK4 1167 aaKnown RBP5.83□□□□□ -1.48
CDC42BPA-211ENST00000466538 ZC3H18Q86VM9 953 aaKnown RBP5.83□□□□□ -1.48
CDC42BPA-211ENST00000466538 ZSWIM9Q86XI8 627 aa5.83□□□□□ -1.48
CDC42BPA-211ENST00000466538 C1orf162Q8NEQ5 155 aaPredicted RBP5.83□□□□□ -1.48
CDC42BPA-211ENST00000466538 ASB15Q8WXK1 588 aa5.83□□□□□ -1.48
CDC42BPA-211ENST00000466538 SSH1Q8WYL5 1049 aa5.83□□□□□ -1.48
CDC42BPA-211ENST00000466538 ALG3Q92685 438 aa5.83□□□□□ -1.48
CDC42BPA-211ENST00000466538 RELTQ969Z4 430 aa5.83□□□□□ -1.48
CDC42BPA-211ENST00000466538 FOXRED1Q96CU9 486 aaPredicted RBP5.83□□□□□ -1.48
CDC42BPA-211ENST00000466538 HOOK2Q96ED9 719 aa5.83□□□□□ -1.48
CDC42BPA-211ENST00000466538 MAML3Q96JK9 1138 aa5.83□□□□□ -1.48
CDC42BPA-211ENST00000466538 ORAI2Q96SN7 254 aa5.83□□□□□ -1.48
CDC42BPA-211ENST00000466538 ZFP64Q9NPA5 681 aa5.83□□□□□ -1.48
CDC42BPA-211ENST00000466538 MSRAQ9UJ68 235 aa5.83□□□□□ -1.48
CDC42BPA-211ENST00000466538 FAN1Q9Y2M0 1017 aa5.83□□□□□ -1.48
CDC42BPA-211ENST00000466538 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.82□□□□□ -1.48
CDC42BPA-211ENST00000466538 TSPAN6O43657 245 aa5.82□□□□□ -1.48
CDC42BPA-211ENST00000466538 KDM1AO60341 852 aa5.82□□□□□ -1.48
CDC42BPA-211ENST00000466538 RFPL1O75677 317 aa5.82□□□□□ -1.48
CDC42BPA-211ENST00000466538 MMEP08473 750 aa5.82□□□□□ -1.48
CDC42BPA-211ENST00000466538 MYBL2P10244 700 aa5.82□□□□□ -1.48
CDC42BPA-211ENST00000466538 NCAM1P13591 858 aa5.82□□□□□ -1.48
CDC42BPA-211ENST00000466538 SDHBP21912 280 aa5.82□□□□□ -1.48
CDC42BPA-211ENST00000466538 RECQLP46063 649 aaPredicted RBP5.82□□□□□ -1.48
CDC42BPA-211ENST00000466538 GPR3P46089 330 aa5.82□□□□□ -1.48
CDC42BPA-211ENST00000466538 MOGSQ13724 837 aa5.82□□□□□ -1.48
CDC42BPA-211ENST00000466538 PDCD1Q15116 288 aa5.82□□□□□ -1.48
CDC42BPA-211ENST00000466538 FSCN1Q16658 493 aaKnown RBP5.82□□□□□ -1.48
CDC42BPA-211ENST00000466538 TTC38Q5R3I4 469 aa5.82□□□□□ -1.48
CDC42BPA-211ENST00000466538 TEPPQ6URK8 271 aa5.82□□□□□ -1.48
CDC42BPA-211ENST00000466538 RTN4RL1Q86UN2 441 aaPredicted RBP5.82□□□□□ -1.48
CDC42BPA-211ENST00000466538 AMOTL1Q8IY63 956 aa5.82□□□□□ -1.48
CDC42BPA-211ENST00000466538 RAVER1Q8IY67 606 aaKnown RBP5.82□□□□□ -1.48
CDC42BPA-211ENST00000466538 CHPFQ8IZ52 775 aa5.82□□□□□ -1.48
CDC42BPA-211ENST00000466538 C7orf31Q8N865 590 aa5.82□□□□□ -1.48
CDC42BPA-211ENST00000466538 HIPK4Q8NE63 616 aa5.82□□□□□ -1.48
CDC42BPA-211ENST00000466538 RTF1Q92541 710 aaKnown RBP5.82□□□□□ -1.48
CDC42BPA-211ENST00000466538 DDX11Q96FC9 970 aa5.82□□□□□ -1.48
CDC42BPA-211ENST00000466538 CCDC136Q96JN2 1154 aa5.82□□□□□ -1.48
CDC42BPA-211ENST00000466538 C8orf48Q96LL4 319 aa5.82□□□□□ -1.48
CDC42BPA-211ENST00000466538 RNF38Q9H0F5 515 aa5.82□□□□□ -1.48
CDC42BPA-211ENST00000466538 CDH19Q9H159 772 aa5.82□□□□□ -1.48
CDC42BPA-211ENST00000466538 MKS1Q9NXB0 559 aa5.82□□□□□ -1.48
CDC42BPA-211ENST00000466538 ZIM2Q9NZV7 527 aa5.82□□□□□ -1.48
CDC42BPA-211ENST00000466538 BTBD7Q9P203 1132 aa5.82□□□□□ -1.48
CDC42BPA-211ENST00000466538 ARHGAP28Q9P2N2 729 aa5.82□□□□□ -1.48
CDC42BPA-211ENST00000466538 OAS3Q9Y6K5 1087 aaKnown RBP5.82□□□□□ -1.48
CDC42BPA-211ENST00000466538 IRS2Q9Y4H2 1338 aa5.81□□□□□ -1.48
CDC42BPA-211ENST00000466538 UBA6A0AVT1 1052 aaPredicted RBP5.81□□□□□ -1.48
CDC42BPA-211ENST00000466538 MAFGO15525 162 aa5.81□□□□□ -1.48
CDC42BPA-211ENST00000466538 PEX10O60683 326 aa5.81□□□□□ -1.48
CDC42BPA-211ENST00000466538 SNUPNO95149 360 aaKnown RBP5.81□□□□□ -1.48
CDC42BPA-211ENST00000466538 U2AF1L5P0DN76 240 aaPredicted RBP5.81□□□□□ -1.48
CDC42BPA-211ENST00000466538 VCAM1P19320 739 aa5.81□□□□□ -1.48
CDC42BPA-211ENST00000466538 IARSP41252 1262 aaKnown RBP5.81□□□□□ -1.48
CDC42BPA-211ENST00000466538 U2AF1Q01081 240 aaKnown RBP eCLIP5.81□□□□□ -1.48
CDC42BPA-211ENST00000466538 TARBP2Q15633 366 aaKnown RBP5.81□□□□□ -1.48
CDC42BPA-211ENST00000466538 ABCB5Q2M3G0 1257 aa5.81□□□□□ -1.48
CDC42BPA-211ENST00000466538 CALML6Q8TD86 181 aa5.81□□□□□ -1.48
CDC42BPA-211ENST00000466538 RSAD2Q8WXG1 361 aa5.81□□□□□ -1.48
CDC42BPA-211ENST00000466538 TUBGCP5Q96RT8 1024 aa5.81□□□□□ -1.48
CDC42BPA-211ENST00000466538 FOXB1Q99853 325 aa5.81□□□□□ -1.48
CDC42BPA-211ENST00000466538 ANKRD6Q9Y2G4 727 aa5.81□□□□□ -1.48
CDC42BPA-211ENST00000466538 HCFC2Q9Y5Z7 792 aa5.81□□□□□ -1.48
CDC42BPA-211ENST00000466538 PRAMEF22A3QJZ6 481 aa5.8□□□□□ -1.48
CDC42BPA-211ENST00000466538 KLHL33A6NCF5 533 aa5.8□□□□□ -1.48
CDC42BPA-211ENST00000466538 FZD9O00144 591 aa5.8□□□□□ -1.48
CDC42BPA-211ENST00000466538 KIF3BO15066 747 aa5.8□□□□□ -1.48
CDC42BPA-211ENST00000466538 ABLIM3O94929 683 aa5.8□□□□□ -1.48
CDC42BPA-211ENST00000466538 ZSCAN20P17040 1043 aaPredicted RBP5.8□□□□□ -1.48
CDC42BPA-211ENST00000466538 JUNBP17275 347 aaPredicted RBP5.8□□□□□ -1.48
CDC42BPA-211ENST00000466538 ENPP1P22413 925 aa5.8□□□□□ -1.48
CDC42BPA-211ENST00000466538 PTGS1P23219 599 aa5.8□□□□□ -1.48
CDC42BPA-211ENST00000466538 VIPR1P32241 457 aa5.8□□□□□ -1.48
CDC42BPA-211ENST00000466538 ALDH6A1Q02252 535 aaKnown RBP5.8□□□□□ -1.48
CDC42BPA-211ENST00000466538 ROM1Q03395 351 aa5.8□□□□□ -1.48
CDC42BPA-211ENST00000466538 CACNB2Q08289 660 aaPredicted RBP5.8□□□□□ -1.48
CDC42BPA-211ENST00000466538 CR1LQ2VPA4 569 aa5.8□□□□□ -1.48
CDC42BPA-211ENST00000466538 TMEM240Q5SV17 173 aa5.8□□□□□ -1.48
CDC42BPA-211ENST00000466538 PRAMEF18Q5VWM3 479 aa5.8□□□□□ -1.48
CDC42BPA-211ENST00000466538 CD276Q5ZPR3 534 aa5.8□□□□□ -1.48
CDC42BPA-211ENST00000466538 TTLL7Q6ZT98 887 aa5.8□□□□□ -1.48
CDC42BPA-211ENST00000466538 PNMA8AQ86V59 439 aaPredicted RBP5.8□□□□□ -1.48
CDC42BPA-211ENST00000466538 CXorf67Q86X51 503 aaPredicted RBP5.8□□□□□ -1.48
CDC42BPA-211ENST00000466538 CILP2Q8IUL8 1156 aa5.8□□□□□ -1.48
CDC42BPA-211ENST00000466538 IGDCC4Q8TDY8 1250 aa5.8□□□□□ -1.48
CDC42BPA-211ENST00000466538 LUC7LQ9NQ29 371 aaKnown RBP5.8□□□□□ -1.48
CDC42BPA-211ENST00000466538 GALNT8Q9NY28 637 aa5.8□□□□□ -1.48
CDC42BPA-211ENST00000466538 FAM53CQ9NYF3 392 aa5.8□□□□□ -1.48
CDC42BPA-211ENST00000466538 ZNF180Q9UJW8 692 aa5.8□□□□□ -1.48
CDC42BPA-211ENST00000466538 NUMBLQ9Y6R0 609 aa5.8□□□□□ -1.48
CDC42BPA-211ENST00000466538 NFIBO00712 420 aa5.79□□□□□ -1.48
CDC42BPA-211ENST00000466538 PRPF6O94906 941 aaKnown RBP5.79□□□□□ -1.48
CDC42BPA-211ENST00000466538 MT-CO1P00395 513 aa5.79□□□□□ -1.48
CDC42BPA-211ENST00000466538 ASGR2P07307 311 aa5.79□□□□□ -1.48
CDC42BPA-211ENST00000466538 MTHFD2P13995 350 aa5.79□□□□□ -1.48
CDC42BPA-211ENST00000466538 MANFP55145 182 aaKnown RBP5.79□□□□□ -1.48
CDC42BPA-211ENST00000466538 SRSF3P84103 164 aaKnown RBP5.79□□□□□ -1.48
CDC42BPA-211ENST00000466538 PCBP2Q15366 365 aaKnown RBP eCLIP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms