RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 TRIM47Q96LD4 638 aa20.69■□□□□ 0.9
CAPN3-209ENST00000466222 MPHOSPH6Q99547 160 aaKnown RBP20.69■□□□□ 0.9
CAPN3-209ENST00000466222 KATNBL1Q9H079 304 aa20.69■□□□□ 0.9
CAPN3-209ENST00000466222 BHMT2Q9H2M3 363 aa20.69■□□□□ 0.9
CAPN3-209ENST00000466222 TUFT1Q9NNX1 390 aa20.69■□□□□ 0.9
CAPN3-209ENST00000466222 RNF186Q9NXI6 227 aa20.69■□□□□ 0.9
CAPN3-209ENST00000466222 DNM3Q9UQ16 869 aa20.69■□□□□ 0.9
CAPN3-209ENST00000466222 WDR64B1ANS9 1081 aa20.68■□□□□ 0.9
CAPN3-209ENST00000466222 GGPS1O95749 300 aa20.68■□□□□ 0.9
CAPN3-209ENST00000466222 PSMC4P43686 418 aa20.68■□□□□ 0.9
CAPN3-209ENST00000466222 SLC12A3P55017 1021 aa20.68■□□□□ 0.9
CAPN3-209ENST00000466222 CCDC62Q6P9F0 684 aa20.68■□□□□ 0.9
CAPN3-209ENST00000466222 CCDC34Q96HJ3 373 aa20.68■□□□□ 0.9
CAPN3-209ENST00000466222 SENP7Q9BQF6 1050 aa20.68■□□□□ 0.9
CAPN3-209ENST00000466222 TINF2Q9BSI4 451 aa20.68■□□□□ 0.9
CAPN3-209ENST00000466222 NFASCO94856 1347 aa20.68■□□□□ 0.9
CAPN3-209ENST00000466222 USP27XA6NNY8 438 aa20.68■□□□□ 0.9
CAPN3-209ENST00000466222 KLRC4O43908 158 aa20.68■□□□□ 0.9
CAPN3-209ENST00000466222 FARP2O94887 1054 aaPredicted RBP20.68■□□□□ 0.9
CAPN3-209ENST00000466222 RPN1P04843 607 aaKnown RBP20.68■□□□□ 0.9
CAPN3-209ENST00000466222 ARSHQ5FYA8 562 aa20.68■□□□□ 0.9
CAPN3-209ENST00000466222 ZNF746Q6NUN9 644 aaPredicted RBP20.68■□□□□ 0.9
CAPN3-209ENST00000466222 SWSAP1Q6NVH7 229 aa20.68■□□□□ 0.9
CAPN3-209ENST00000466222 MAMDC4Q6UXC1 1216 aa20.68■□□□□ 0.9
CAPN3-209ENST00000466222 DDX12PQ92771 950 aa20.68■□□□□ 0.9
CAPN3-209ENST00000466222 HPS3Q969F9 1004 aa20.68■□□□□ 0.9
CAPN3-209ENST00000466222 TCEAL9Q9UHQ7 104 aa20.68■□□□□ 0.9
CAPN3-209ENST00000466222 DACH1Q9UI36 760 aa20.68■□□□□ 0.9
CAPN3-209ENST00000466222 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.67■□□□□ 0.9
CAPN3-209ENST00000466222 P4HBP07237 508 aaKnown RBP20.67■□□□□ 0.9
CAPN3-209ENST00000466222 TXNP10599 105 aaKnown RBP20.67■□□□□ 0.9
CAPN3-209ENST00000466222 CYP2C19P33261 490 aa20.67■□□□□ 0.9
CAPN3-209ENST00000466222 ADCYAP1R1P41586 468 aa20.67■□□□□ 0.9
CAPN3-209ENST00000466222 LACTBP83111 547 aaPredicted RBP20.67■□□□□ 0.9
CAPN3-209ENST00000466222 MORC3Q14149 939 aa20.67■□□□□ 0.9
CAPN3-209ENST00000466222 ARMCX5Q6P1M9 558 aa20.67■□□□□ 0.9
CAPN3-209ENST00000466222 ZNF467Q7Z7K2 595 aaPredicted RBP20.67■□□□□ 0.9
CAPN3-209ENST00000466222 CCDC60Q8IWA6 550 aaPredicted RBP20.67■□□□□ 0.9
CAPN3-209ENST00000466222 C7orf25Q9BPX7 421 aa20.67■□□□□ 0.9
CAPN3-209ENST00000466222 PCDHA10Q9Y5I2 948 aa20.67■□□□□ 0.9
CAPN3-209ENST00000466222 TGFB3P10600 412 aa20.66■□□□□ 0.9
CAPN3-209ENST00000466222 CYP11B2P19099 503 aa20.66■□□□□ 0.9
CAPN3-209ENST00000466222 ASIC1P78348 528 aa20.66■□□□□ 0.9
CAPN3-209ENST00000466222 HSDL1Q3SXM5 330 aa20.66■□□□□ 0.9
CAPN3-209ENST00000466222 KMT5BQ4FZB7 885 aa20.66■□□□□ 0.9
CAPN3-209ENST00000466222 ABHD15Q6UXT9 468 aa20.66■□□□□ 0.9
CAPN3-209ENST00000466222 GPBP1Q86WP2 473 aa20.66■□□□□ 0.9
CAPN3-209ENST00000466222 ERO1AQ96HE7 468 aa20.66■□□□□ 0.9
CAPN3-209ENST00000466222 MAGEF1Q9HAY2 307 aa20.66■□□□□ 0.9
CAPN3-209ENST00000466222 GABBR1Q9UBS5 961 aa20.66■□□□□ 0.9
CAPN3-209ENST00000466222 GABRQQ9UN88 632 aa20.66■□□□□ 0.9
CAPN3-209ENST00000466222 DIS3Q9Y2L1 958 aaKnown RBP20.66■□□□□ 0.9
CAPN3-209ENST00000466222 ZNF862O60290 1169 aa20.66■□□□□ 0.9
CAPN3-209ENST00000466222 QARSP47897 775 aaKnown RBP20.66■□□□□ 0.9
CAPN3-209ENST00000466222 JAK3P52333 1124 aa20.66■□□□□ 0.9
CAPN3-209ENST00000466222 UTP14CQ5TAP6 766 aaKnown RBP20.66■□□□□ 0.9
CAPN3-209ENST00000466222 TRIML1Q8N9V2 468 aa20.66■□□□□ 0.9
CAPN3-209ENST00000466222 ZNF592Q92610 1267 aa20.66■□□□□ 0.9
CAPN3-209ENST00000466222 GSDMAQ96QA5 445 aa20.66■□□□□ 0.9
CAPN3-209ENST00000466222 RUSC1Q9BVN2 902 aa20.66■□□□□ 0.9
CAPN3-209ENST00000466222 HSD3B7Q9H2F3 369 aa20.66■□□□□ 0.9
CAPN3-209ENST00000466222 MLXIPQ9HAP2 919 aa20.66■□□□□ 0.9
CAPN3-209ENST00000466222 STK24Q9Y6E0 443 aa20.66■□□□□ 0.9
CAPN3-209ENST00000466222 SYNGAP1Q96PV0 1343 aa20.66■□□□□ 0.9
CAPN3-209ENST00000466222 SFNP31947 248 aa20.65■□□□□ 0.9
CAPN3-209ENST00000466222 MAP2K2P36507 400 aa20.65■□□□□ 0.9
CAPN3-209ENST00000466222 SYT2Q8N9I0 419 aaPredicted RBP20.65■□□□□ 0.9
CAPN3-209ENST00000466222 DNAJC19Q96DA6 116 aa20.65■□□□□ 0.9
CAPN3-209ENST00000466222 ZSWIM4Q9H7M6 989 aa20.65■□□□□ 0.9
CAPN3-209ENST00000466222 ZHX1Q9UKY1 873 aaPredicted RBP20.65■□□□□ 0.9
CAPN3-209ENST00000466222 LOC102724159A0A0B4J2E5 919 aa20.65■□□□□ 0.9
CAPN3-209ENST00000466222 GSTTP1A0A1W2PQM5 241 aa20.65■□□□□ 0.9
CAPN3-209ENST00000466222 ADCY6O43306 1168 aa20.65■□□□□ 0.9
CAPN3-209ENST00000466222 HOXC6P09630 235 aa20.65■□□□□ 0.9
CAPN3-209ENST00000466222 CD44P16070 742 aaKnown RBP20.65■□□□□ 0.9
CAPN3-209ENST00000466222 UBASH3AP57075 661 aa20.65■□□□□ 0.9
CAPN3-209ENST00000466222 AMPD3Q01432 767 aa20.65■□□□□ 0.9
CAPN3-209ENST00000466222 NEDD9Q14511 834 aa20.65■□□□□ 0.9
CAPN3-209ENST00000466222 PWP2Q15269 919 aaKnown RBP20.65■□□□□ 0.9
CAPN3-209ENST00000466222 CELF3Q5SZQ8 465 aaKnown RBP20.65■□□□□ 0.9
CAPN3-209ENST00000466222 E4F1Q66K89 784 aaPredicted RBP20.65■□□□□ 0.9
CAPN3-209ENST00000466222 MAPK8IP1Q9UQF2 711 aa20.65■□□□□ 0.9
CAPN3-209ENST00000466222 GDAQ9Y2T3 454 aa20.65■□□□□ 0.9
CAPN3-209ENST00000466222 SLC26A4O43511 780 aa20.64■□□□□ 0.89
CAPN3-209ENST00000466222 EYA4O95677 639 aa20.64■□□□□ 0.89
CAPN3-209ENST00000466222 SERPINC1P01008 464 aa20.64■□□□□ 0.89
CAPN3-209ENST00000466222 IDEP14735 1019 aa20.64■□□□□ 0.89
CAPN3-209ENST00000466222 ACVR2BQ13705 512 aa20.64■□□□□ 0.89
CAPN3-209ENST00000466222 CT47A1Q5JQC4 288 aaPredicted RBP20.64■□□□□ 0.89
CAPN3-209ENST00000466222 METTL7BQ6UX53 244 aa20.64■□□□□ 0.89
CAPN3-209ENST00000466222 SCFD2Q8WU76 684 aa20.64■□□□□ 0.89
CAPN3-209ENST00000466222 NACC1Q96RE7 527 aa20.64■□□□□ 0.89
CAPN3-209ENST00000466222 PCYT2Q99447 389 aa20.64■□□□□ 0.89
CAPN3-209ENST00000466222 TRMT1Q9NXH9 659 aaKnown RBP20.64■□□□□ 0.89
CAPN3-209ENST00000466222 PSMC5P62195 406 aa20.63■□□□□ 0.89
CAPN3-209ENST00000466222 SP3Q02447 781 aa20.63■□□□□ 0.89
CAPN3-209ENST00000466222 TTLL4Q14679 1199 aa20.63■□□□□ 0.89
CAPN3-209ENST00000466222 PLA2G4FQ68DD2 849 aa20.63■□□□□ 0.89
CAPN3-209ENST00000466222 DHX37Q8IY37 1157 aaKnown RBP20.63■□□□□ 0.89
CAPN3-209ENST00000466222 MLKLQ8NB16 471 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms