RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 PCDHB9Q9Y5E1 797 aa10.28□□□□□ -0.76
SCAF11-205ENST00000465950 BCL9O00512 1426 aa10.28□□□□□ -0.76
SCAF11-205ENST00000465950 CAND2O75155 1236 aa10.28□□□□□ -0.76
SCAF11-205ENST00000465950 ZSCAN22P10073 491 aaPredicted RBP10.28□□□□□ -0.76
SCAF11-205ENST00000465950 SMARCA1P28370 1054 aa10.28□□□□□ -0.76
SCAF11-205ENST00000465950 ITKQ08881 620 aa10.28□□□□□ -0.76
SCAF11-205ENST00000465950 FAM117BQ6P1L5 589 aa10.28□□□□□ -0.76
SCAF11-205ENST00000465950 SLITRK1Q96PX8 696 aa10.28□□□□□ -0.76
SCAF11-205ENST00000465950 MMTAG2Q9BU76 263 aaKnown RBP10.28□□□□□ -0.76
SCAF11-205ENST00000465950 NDUFB9Q9Y6M9 179 aa10.28□□□□□ -0.76
SCAF11-205ENST00000465950 ZNF197O14709 1029 aa10.28□□□□□ -0.76
SCAF11-205ENST00000465950 GMNNO75496 209 aa10.28□□□□□ -0.76
SCAF11-205ENST00000465950 ERCC3P19447 782 aa10.28□□□□□ -0.76
SCAF11-205ENST00000465950 PRDX5P30044 214 aa10.28□□□□□ -0.76
SCAF11-205ENST00000465950 ADORA1P30542 326 aa10.28□□□□□ -0.76
SCAF11-205ENST00000465950 RFC2P35250 354 aa10.28□□□□□ -0.76
SCAF11-205ENST00000465950 ARL4AP40617 200 aa10.28□□□□□ -0.76
SCAF11-205ENST00000465950 TFAMQ00059 246 aaKnown RBP10.28□□□□□ -0.76
SCAF11-205ENST00000465950 C7orf61Q8IZ16 206 aa10.28□□□□□ -0.76
SCAF11-205ENST00000465950 OSCP1Q8WVF1 389 aa10.28□□□□□ -0.76
SCAF11-205ENST00000465950 MOXD2PA6NHM9 499 aa10.28□□□□□ -0.76
SCAF11-205ENST00000465950 PRPF3O43395 683 aaKnown RBP10.28□□□□□ -0.76
SCAF11-205ENST00000465950 SORBS3O60504 671 aa10.28□□□□□ -0.76
SCAF11-205ENST00000465950 ACADMP11310 421 aa10.28□□□□□ -0.76
SCAF11-205ENST00000465950 PARVGQ9HBI0 331 aa10.28□□□□□ -0.76
SCAF11-205ENST00000465950 OLFML3Q9NRN5 406 aa10.28□□□□□ -0.76
SCAF11-205ENST00000465950 STAP1Q9ULZ2 295 aa10.28□□□□□ -0.76
SCAF11-205ENST00000465950 NCKAP1Q9Y2A7 1128 aa10.28□□□□□ -0.76
SCAF11-205ENST00000465950 GAKO14976 1311 aa10.28□□□□□ -0.76
SCAF11-205ENST00000465950 NR3C2P08235 984 aa10.27□□□□□ -0.76
SCAF11-205ENST00000465950 GOLGA8HP0CJ92 632 aa10.27□□□□□ -0.76
SCAF11-205ENST00000465950 TNNT1P13805 278 aa10.27□□□□□ -0.76
SCAF11-205ENST00000465950 PCBP1Q15365 356 aaKnown RBP eCLIP10.27□□□□□ -0.76
SCAF11-205ENST00000465950 TMEM39BQ9GZU3 492 aa10.27□□□□□ -0.76
SCAF11-205ENST00000465950 SPATC1LQ9H0A9 340 aa10.27□□□□□ -0.76
SCAF11-205ENST00000465950 SLC38A10Q9HBR0 1119 aa10.27□□□□□ -0.76
SCAF11-205ENST00000465950 ADM5C9JUS6 153 aa10.27□□□□□ -0.76
SCAF11-205ENST00000465950 TLL1O43897 1013 aa10.27□□□□□ -0.76
SCAF11-205ENST00000465950 AXLP30530 894 aa10.27□□□□□ -0.76
SCAF11-205ENST00000465950 UBE2HP62256 183 aa10.27□□□□□ -0.76
SCAF11-205ENST00000465950 PTPN12Q05209 780 aaKnown RBP10.27□□□□□ -0.76
SCAF11-205ENST00000465950 IFFO1Q0D2I5 559 aa10.27□□□□□ -0.76
SCAF11-205ENST00000465950 GTF2H3Q13889 308 aa10.27□□□□□ -0.76
SCAF11-205ENST00000465950 ASIC2Q16515 512 aa10.27□□□□□ -0.76
SCAF11-205ENST00000465950 SV2CQ496J9 727 aa10.27□□□□□ -0.76
SCAF11-205ENST00000465950 ARMC6Q6NXE6 501 aa10.27□□□□□ -0.76
SCAF11-205ENST00000465950 TOGARAM2Q6ZUX3 1019 aa10.27□□□□□ -0.76
SCAF11-205ENST00000465950 TAX1BP1Q86VP1 789 aa10.27□□□□□ -0.76
SCAF11-205ENST00000465950 LCORLQ8N3X6 602 aa10.27□□□□□ -0.76
SCAF11-205ENST00000465950 CEP112Q8N8E3 955 aa10.27□□□□□ -0.76
SCAF11-205ENST00000465950 CCDC42Q96M95 316 aa10.27□□□□□ -0.76
SCAF11-205ENST00000465950 ZNF558Q96NG5 402 aa10.27□□□□□ -0.76
SCAF11-205ENST00000465950 DEFB118Q96PH6 123 aa10.27□□□□□ -0.76
SCAF11-205ENST00000465950 TSSK1BQ9BXA7 367 aa10.27□□□□□ -0.76
SCAF11-205ENST00000465950 PANK4Q9NVE7 773 aa10.27□□□□□ -0.76
SCAF11-205ENST00000465950 WDR19Q8NEZ3 1342 aa10.27□□□□□ -0.77
SCAF11-205ENST00000465950 SPOPO43791 374 aa10.27□□□□□ -0.77
SCAF11-205ENST00000465950 SYNCRIPO60506 623 aaKnown RBP10.27□□□□□ -0.77
SCAF11-205ENST00000465950 FGAP02671 866 aa10.27□□□□□ -0.77
SCAF11-205ENST00000465950 NME8Q8N427 588 aa10.27□□□□□ -0.77
SCAF11-205ENST00000465950 CFAP57Q96MR6 1250 aa10.27□□□□□ -0.77
SCAF11-205ENST00000465950 TSHZ2Q9NRE2 1034 aa10.27□□□□□ -0.77
SCAF11-205ENST00000465950 ALDH2P05091 517 aa10.27□□□□□ -0.77
SCAF11-205ENST00000465950 SLC16A2P36021 539 aa10.27□□□□□ -0.77
SCAF11-205ENST00000465950 EVCP57679 992 aa10.27□□□□□ -0.77
SCAF11-205ENST00000465950 ERVK-9P63128 1117 aa10.27□□□□□ -0.77
SCAF11-205ENST00000465950 ERVK-24P63145 666 aa10.27□□□□□ -0.77
SCAF11-205ENST00000465950 ANO1Q5XXA6 986 aa10.27□□□□□ -0.77
SCAF11-205ENST00000465950 SYCE1Q8N0S2 351 aa10.27□□□□□ -0.77
SCAF11-205ENST00000465950 FAM149B1Q96BN6 582 aa10.27□□□□□ -0.77
SCAF11-205ENST00000465950 DTNBP1Q96EV8 351 aa10.27□□□□□ -0.77
SCAF11-205ENST00000465950 DCP1AQ9NPI6 582 aaPredicted RBP10.27□□□□□ -0.77
SCAF11-205ENST00000465950 SLC45A1Q9Y2W3 748 aa10.27□□□□□ -0.77
SCAF11-205ENST00000465950 NEURL4Q96JN8 1562 aa10.27□□□□□ -0.77
SCAF11-205ENST00000465950 DGAT1O75907 488 aa10.27□□□□□ -0.77
SCAF11-205ENST00000465950 BAATQ14032 418 aaPredicted RBP10.27□□□□□ -0.77
SCAF11-205ENST00000465950 SPRYD7Q5W111 196 aa10.27□□□□□ -0.77
SCAF11-205ENST00000465950 OR6B3Q8NGW1 331 aa10.27□□□□□ -0.77
SCAF11-205ENST00000465950 EAF2Q96CJ1 260 aaPredicted RBP10.27□□□□□ -0.77
SCAF11-205ENST00000465950 MCCC1Q96RQ3 725 aaPredicted RBP10.27□□□□□ -0.77
SCAF11-205ENST00000465950 NOC4LQ9BVI4 516 aaKnown RBP10.27□□□□□ -0.77
SCAF11-205ENST00000465950 ARMCX3Q9UH62 379 aaPredicted RBP10.27□□□□□ -0.77
SCAF11-205ENST00000465950 GPR25O00155 361 aa10.26□□□□□ -0.77
SCAF11-205ENST00000465950 GPC3P51654 580 aa10.26□□□□□ -0.77
SCAF11-205ENST00000465950 TUBB4BP68371 445 aa10.26□□□□□ -0.77
SCAF11-205ENST00000465950 KCNB1Q14721 858 aa10.26□□□□□ -0.77
SCAF11-205ENST00000465950 TIGD5Q53EQ6 642 aa10.26□□□□□ -0.77
SCAF11-205ENST00000465950 KIAA1755Q5JYT7 1200 aa10.26□□□□□ -0.77
SCAF11-205ENST00000465950 TMCO3Q6UWJ1 677 aa10.26□□□□□ -0.77
SCAF11-205ENST00000465950 GBP6Q6ZN66 633 aa10.26□□□□□ -0.77
SCAF11-205ENST00000465950 NRKQ7Z2Y5 1582 aa10.26□□□□□ -0.77
SCAF11-205ENST00000465950 IL18RAPO95256 599 aa10.26□□□□□ -0.77
SCAF11-205ENST00000465950 IL1R1P14778 569 aa10.26□□□□□ -0.77
SCAF11-205ENST00000465950 KLRC2P26717 231 aa10.26□□□□□ -0.77
SCAF11-205ENST00000465950 GJC1P36383 396 aa10.26□□□□□ -0.77
SCAF11-205ENST00000465950 EPHA7Q15375 998 aa10.26□□□□□ -0.77
SCAF11-205ENST00000465950 PCDHB6Q9Y5E3 794 aa10.26□□□□□ -0.77
SCAF11-205ENST00000465950 CSF1RP07333 972 aa10.26□□□□□ -0.77
SCAF11-205ENST00000465950 MEI1Q5TIA1 1274 aa10.26□□□□□ -0.77
SCAF11-205ENST00000465950 RHPN2Q8IUC4 686 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms