RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 ATP2B1P20020 1258 aa7.98□□□□□ -1.13
SMC4-205ENST00000465563 ACVRL1P37023 503 aa7.98□□□□□ -1.13
SMC4-205ENST00000465563 PRKD1Q15139 912 aaPredicted RBP7.98□□□□□ -1.13
SMC4-205ENST00000465563 LONRF2Q1L5Z9 754 aa7.98□□□□□ -1.13
SMC4-205ENST00000465563 ZC3H7AQ8IWR0 971 aaKnown RBP7.98□□□□□ -1.13
SMC4-205ENST00000465563 SCYL1Q96KG9 808 aa7.98□□□□□ -1.13
SMC4-205ENST00000465563 DHRS4Q9BTZ2 278 aa7.98□□□□□ -1.13
SMC4-205ENST00000465563 TANGO6Q9C0B7 1094 aa7.98□□□□□ -1.13
SMC4-205ENST00000465563 INCENPQ9NQS7 918 aa7.98□□□□□ -1.13
SMC4-205ENST00000465563 ZNF561-AS1K7EIQ3 104 aa7.97□□□□□ -1.13
SMC4-205ENST00000465563 CYR61O00622 381 aa7.97□□□□□ -1.13
SMC4-205ENST00000465563 ETV4P43268 484 aa7.97□□□□□ -1.13
SMC4-205ENST00000465563 RRADP55042 308 aa7.97□□□□□ -1.13
SMC4-205ENST00000465563 CXXC5Q7LFL8 322 aaKnown RBP7.97□□□□□ -1.13
SMC4-205ENST00000465563 EXOC2Q96KP1 924 aa7.97□□□□□ -1.13
SMC4-205ENST00000465563 GALNT8Q9NY28 637 aa7.97□□□□□ -1.13
SMC4-205ENST00000465563 FBXO10Q9UK96 956 aa7.97□□□□□ -1.13
SMC4-205ENST00000465563 CCDC66A2RUB6 948 aa7.96□□□□□ -1.14
SMC4-205ENST00000465563 PRAMEF25A6NGN4 478 aa7.96□□□□□ -1.14
SMC4-205ENST00000465563 CLASP2O75122 1294 aaKnown RBP7.96□□□□□ -1.14
SMC4-205ENST00000465563 CRTAMO95727 393 aa7.96□□□□□ -1.14
SMC4-205ENST00000465563 C4BPAP04003 597 aaKnown RBP7.96□□□□□ -1.14
SMC4-205ENST00000465563 CR2P20023 1033 aa7.96□□□□□ -1.14
SMC4-205ENST00000465563 AOAHP28039 575 aa7.96□□□□□ -1.14
SMC4-205ENST00000465563 DNM2P50570 870 aa7.96□□□□□ -1.14
SMC4-205ENST00000465563 HERVK_113P62684 666 aa7.96□□□□□ -1.14
SMC4-205ENST00000465563 RNF151Q2KHN1 245 aa7.96□□□□□ -1.14
SMC4-205ENST00000465563 ADOQ96SZ5 270 aa7.96□□□□□ -1.14
SMC4-205ENST00000465563 ZDHHC5Q9C0B5 715 aa7.96□□□□□ -1.14
SMC4-205ENST00000465563 SMURF1Q9HCE7 757 aa7.96□□□□□ -1.14
SMC4-205ENST00000465563 OAZ3Q9UMX2 235 aa7.96□□□□□ -1.14
SMC4-205ENST00000465563 MRPS23Q9Y3D9 190 aaKnown RBP7.96□□□□□ -1.14
SMC4-205ENST00000465563 APPP05067 770 aa7.95□□□□□ -1.14
SMC4-205ENST00000465563 COMTP21964 271 aa7.95□□□□□ -1.14
SMC4-205ENST00000465563 HMGA2P52926 109 aa7.95□□□□□ -1.14
SMC4-205ENST00000465563 IL13RA1P78552 427 aa7.95□□□□□ -1.14
SMC4-205ENST00000465563 LACTBP83111 547 aaPredicted RBP7.95□□□□□ -1.14
SMC4-205ENST00000465563 FUKQ8N0W3 1084 aa7.95□□□□□ -1.14
SMC4-205ENST00000465563 BTBD7Q9P203 1132 aa7.95□□□□□ -1.14
SMC4-205ENST00000465563 NR2E1Q9Y466 385 aa7.95□□□□□ -1.14
SMC4-205ENST00000465563 KDM2BQ8NHM5 1336 aa7.95□□□□□ -1.14
SMC4-205ENST00000465563 KCNK3O14649 394 aa7.94□□□□□ -1.14
SMC4-205ENST00000465563 RAD17O75943 681 aa7.94□□□□□ -1.14
SMC4-205ENST00000465563 HMGCRP04035 888 aa7.94□□□□□ -1.14
SMC4-205ENST00000465563 KCNQ1P51787 676 aa7.94□□□□□ -1.14
SMC4-205ENST00000465563 STILQ15468 1287 aa7.94□□□□□ -1.14
SMC4-205ENST00000465563 ZC3H12BQ5HYM0 836 aaKnown RBP7.94□□□□□ -1.14
SMC4-205ENST00000465563 ZFPM1Q8IX07 1006 aa7.94□□□□□ -1.14
SMC4-205ENST00000465563 WDR48Q8TAF3 677 aa7.94□□□□□ -1.14
SMC4-205ENST00000465563 EDAQ92838 391 aa7.94□□□□□ -1.14
SMC4-205ENST00000465563 WNK4Q96J92 1243 aa7.94□□□□□ -1.14
SMC4-205ENST00000465563 HIRIP3Q9BW71 556 aaPredicted RBP7.94□□□□□ -1.14
SMC4-205ENST00000465563 CDC14BO60729 498 aa7.93□□□□□ -1.14
SMC4-205ENST00000465563 SLPIP03973 132 aa7.93□□□□□ -1.14
SMC4-205ENST00000465563 MC4RP32245 332 aa7.93□□□□□ -1.14
SMC4-205ENST00000465563 ADCY8P40145 1251 aa7.93□□□□□ -1.14
SMC4-205ENST00000465563 NOLC1Q14978 699 aaKnown RBP eCLIP7.93□□□□□ -1.14
SMC4-205ENST00000465563 AGBL4Q5VU57 503 aa7.93□□□□□ -1.14
SMC4-205ENST00000465563 DPYSL5Q9BPU6 564 aa7.93□□□□□ -1.14
SMC4-205ENST00000465563 MRIQ9BWK5 157 aa7.93□□□□□ -1.14
SMC4-205ENST00000465563 BTBD2Q9BX70 525 aa7.93□□□□□ -1.14
SMC4-205ENST00000465563 ARHGAP6O43182 974 aa7.92□□□□□ -1.14
SMC4-205ENST00000465563 SUV39H1O43463 412 aa7.92□□□□□ -1.14
SMC4-205ENST00000465563 EFCAB14O75071 495 aa7.92□□□□□ -1.14
SMC4-205ENST00000465563 GTF2F1P35269 517 aaKnown RBP eCLIP7.92□□□□□ -1.14
SMC4-205ENST00000465563 NFYCQ13952 458 aa7.92□□□□□ -1.14
SMC4-205ENST00000465563 EIF4HQ15056 248 aaKnown RBP7.92□□□□□ -1.14
SMC4-205ENST00000465563 OTOP2Q7RTS6 562 aa7.92□□□□□ -1.14
SMC4-205ENST00000465563 LRP10Q7Z4F1 713 aa7.92□□□□□ -1.14
SMC4-205ENST00000465563 POLNQ7Z5Q5 900 aa7.92□□□□□ -1.14
SMC4-205ENST00000465563 ZNF341Q9BYN7 854 aa7.92□□□□□ -1.14
SMC4-205ENST00000465563 C12orf65Q9H3J6 166 aaKnown RBP7.92□□□□□ -1.14
SMC4-205ENST00000465563 NDOR1Q9UHB4 597 aa7.92□□□□□ -1.14
SMC4-205ENST00000465563 HS3ST3A1Q9Y663 406 aa7.92□□□□□ -1.14
SMC4-205ENST00000465563 ECE1P42892 770 aa7.91□□□□□ -1.14
SMC4-205ENST00000465563 SEC23AQ15436 765 aa7.91□□□□□ -1.14
SMC4-205ENST00000465563 RNF207Q6ZRF8 634 aa7.91□□□□□ -1.14
SMC4-205ENST00000465563 LARP4Q71RC2 724 aaKnown RBP eCLIP7.91□□□□□ -1.14
SMC4-205ENST00000465563 CISD2Q8N5K1 135 aaKnown RBP7.91□□□□□ -1.14
SMC4-205ENST00000465563 AMNQ9BXJ7 453 aa7.91□□□□□ -1.14
SMC4-205ENST00000465563 SLC52A2Q9HAB3 445 aa7.91□□□□□ -1.14
SMC4-205ENST00000465563 UCKL1Q9NWZ5 548 aa7.91□□□□□ -1.14
SMC4-205ENST00000465563 CDC42EP3Q9UKI2 254 aa7.91□□□□□ -1.14
SMC4-205ENST00000465563 SLC30A1Q9Y6M5 507 aa7.91□□□□□ -1.14
SMC4-205ENST00000465563 MATN2O00339 956 aa7.9□□□□□ -1.14
SMC4-205ENST00000465563 SCDO00767 359 aa7.9□□□□□ -1.14
SMC4-205ENST00000465563 MPIG6BO95866 241 aa7.9□□□□□ -1.14
SMC4-205ENST00000465563 MMEP08473 750 aa7.9□□□□□ -1.14
SMC4-205ENST00000465563 ACO1P21399 889 aaKnown RBP7.9□□□□□ -1.14
SMC4-205ENST00000465563 FOXE3Q13461 319 aa7.9□□□□□ -1.14
SMC4-205ENST00000465563 SERINC3Q13530 473 aa7.9□□□□□ -1.14
SMC4-205ENST00000465563 TBR1Q16650 682 aa7.9□□□□□ -1.14
SMC4-205ENST00000465563 NRN1LQ496H8 165 aa7.9□□□□□ -1.14
SMC4-205ENST00000465563 MAGEB10Q96LZ2 347 aaPredicted RBP7.9□□□□□ -1.14
SMC4-205ENST00000465563 OR14A2Q96R54 314 aa7.9□□□□□ -1.14
SMC4-205ENST00000465563 KIAA1683Q9H0B3 1180 aa7.9□□□□□ -1.14
SMC4-205ENST00000465563 PUF60Q9UHX1 559 aaKnown RBP7.9□□□□□ -1.14
SMC4-205ENST00000465563 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.89□□□□□ -1.15
SMC4-205ENST00000465563 RPS19P39019 145 aaKnown RBP7.89□□□□□ -1.15
SMC4-205ENST00000465563 CD83Q01151 205 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms